Seed Cluster Table

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missmath polyA/T blast hit
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total hit 35462
Id No 0 to 19 [Next 20]

NoCluster IdContig IdFragmentshomology search resultscoree-valueconsensus lengthover view
7
5
AY132012.f
1
ref|NP_171616.1| chloroplast RNA-binding protein cp33, putative; protein id: At1g01080.1, supported by cDNA: 21739., supported by cDNA: gi_16930400 [Arabidopsis thaliana]|gi|16930401|gb|AAL31886.1|AF419554_1 At1g01080/T25K16_7 [Arabidopsis thaliana]|gi|21554268|gb|AAM63343.1| ribonucleoprotein, putative [Arabidopsis thaliana]|gi|22135777|gb|AAM91045.1| At1g01080/T25K16_7 [Arabidopsis thaliana]461e-129882
9
6
AY063724.f
1
ref|NP_171617.1| pyruvate dehydrogenase E1 alpha subunit; protein id: At1g01090.1, supported by cDNA: gi_15450706, supported by cDNA: gi_17380621, supported by cDNA: gi_2454181 [Arabidopsis thaliana]|gi|2454182|gb|AAB86803.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana]|gi|15450707|gb|AAK96625.1| At1g01090/T25K16_8 [Arabidopsis thaliana]|gi|17380622|gb|AAL36074.1| At1g01090/T25K16_8 [Arabidopsis thaliana]7940.01287
16
11
AY102133.f
1
ref|NP_563619.1| expressed protein; protein id: At1g01160.1, supported by cDNA: gi_15294231, supported by cDNA: gi_20857111 [Arabidopsis thaliana]|gi|25406716|pir||H86141 protein T25K16.15 [imported] - Arabidopsis thaliana|gi|6715636|gb|AAF26463.1|AC007323_4 T25K16.15 [Arabidopsis thaliana]|gi|15294232|gb|AAK95293.1|AF410307_1 At1g01160/F6F3_1 [Arabidopsis thaliana]|gi|20857112|gb|AAM26700.1| At1g01160/F6F3_1 [Arabidopsis thaliana]|gi|21539892|gb|AAM52882.1| putative transcription co-activator [Arabidopsis thaliana]2284e-59588
17
11
AV821553.f
1
ref|NP_563619.1| expressed protein; protein id: At1g01160.1, supported by cDNA: gi_15294231, supported by cDNA: gi_20857111 [Arabidopsis thaliana]|gi|25406716|pir||H86141 protein T25K16.15 [imported] - Arabidopsis thaliana|gi|6715636|gb|AAF26463.1|AC007323_4 T25K16.15 [Arabidopsis thaliana]|gi|15294232|gb|AAK95293.1|AF410307_1 At1g01160/F6F3_1 [Arabidopsis thaliana]|gi|20857112|gb|AAM26700.1| At1g01160/F6F3_1 [Arabidopsis thaliana]|gi|21539892|gb|AAM52882.1| putative transcription co-activator [Arabidopsis thaliana]321.9364
19
12
At1g01170.f
1
gb|AAF26466.1|AC007323_7 T25K16.16 [Arabidopsis thaliana]2021e-51294
20
13
At1g01180.f
1
ref|NP_171626.1| hypothetical protein; protein id: At1g01180.1 [Arabidopsis thaliana]|gi|25406717|pir||A86142 protein T25K16.17 [imported] - Arabidopsis thaliana|gi|6715637|gb|AAF26464.1|AC007323_5 T25K16.17 [Arabidopsis thaliana]9460.01437
21
13
AU227148.r
1
ref|NP_171626.1| hypothetical protein; protein id: At1g01180.1 [Arabidopsis thaliana]|gi|25406717|pir||A86142 protein T25K16.17 [imported] - Arabidopsis thaliana|gi|6715637|gb|AAF26464.1|AC007323_5 T25K16.17 [Arabidopsis thaliana]1202e-52437
22
13
AU236273.f
1
ref|NP_171626.1| hypothetical protein; protein id: At1g01180.1 [Arabidopsis thaliana]|gi|25406717|pir||A86142 protein T25K16.17 [imported] - Arabidopsis thaliana|gi|6715637|gb|AAF26464.1|AC007323_5 T25K16.17 [Arabidopsis thaliana]2155e-66496
43
29
AV536135.r
1
ref|NP_171654.1| hypothetical protein; protein id: At1g01470.1, supported by cDNA: gi_18650613 [Arabidopsis thaliana]|gi|25347099|pir||D86145 putative desication related protein LEA14 - Arabidopsis thaliana|gi|1922244|emb|CAA71174.1| putative desication related protein LEA14 [Arabidopsis thaliana]|gi|2505882|emb|CAA73311.1| LEA protein [Arabidopsis thaliana]|gi|8920585|gb|AAF81307.1|AC061957_3 Contains similarity to a late embryogenesis abundant protein LEA14-A from Gossypium hirsutum gi|1170745. ESTs gb|T88650, gb|AI994095, gb|Z37258, gb|R30106, gb|H76171 come from this gene. [Arabidopsis thaliana]|gi|18650614|gb|AAL75906.1| At1g01470/F22L4_2 [Arabidopsis thaliana]1693e-42461
45
30
At1g01480.f
1
ref|NP_171655.1| 1-aminocyclopropane-1-carboxylate synthase (ACC synthase); protein id: At1g01480.1, supported by cDNA: gi_12248010, supported by cDNA: gi_166579 [Arabidopsis thaliana]|gi|543712|sp|Q06402|1A12_ARATH 1-aminocyclopropane-2-carboxylate synthase 2 (ACC synthase 2) (S-adenosyl-L-methionine methylthioadenosine-lyase 2)|gi|476924|pir||A47199 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) - Arabidopsis thaliana|gi|16148|emb|CAA78260.1| 1-aminocyclopropane 1-carboxylate synthase [Arabidopsis thaliana]|gi|166580|gb|AAB59298.1| 1-aminocyclopropane-1-carboxylate synthase|gi|2505881|emb|CAA73310.1| ACC-synthase [Arabidopsis thaliana]|gi|8920586|gb|AAF81308.1|AC061957_4 Identical to 1-aminocyclopropane-1-carboxylate synthase (ASC2) from Arabidopsis thaliana gb|M95594 and contains an aminotransferases class-I PF|00155 domain. EST gb|BE038138 comes from this gene|gi|12248011|gb|AAG50097.1|AF334719_1 1-aminocyclopropane-1-carboxylate synthase ACS2 [Arabidopsis thaliana]10030.01491
46
30
AF334719.1|.x
1
ref|NP_171655.1| 1-aminocyclopropane-1-carboxylate synthase (ACC synthase); protein id: At1g01480.1, supported by cDNA: gi_12248010, supported by cDNA: gi_166579 [Arabidopsis thaliana]|gi|543712|sp|Q06402|1A12_ARATH 1-aminocyclopropane-2-carboxylate synthase 2 (ACC synthase 2) (S-adenosyl-L-methionine methylthioadenosine-lyase 2)|gi|476924|pir||A47199 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) - Arabidopsis thaliana|gi|16148|emb|CAA78260.1| 1-aminocyclopropane 1-carboxylate synthase [Arabidopsis thaliana]|gi|166580|gb|AAB59298.1| 1-aminocyclopropane-1-carboxylate synthase|gi|2505881|emb|CAA73310.1| ACC-synthase [Arabidopsis thaliana]|gi|8920586|gb|AAF81308.1|AC061957_4 Identical to 1-aminocyclopropane-1-carboxylate synthase (ASC2) from Arabidopsis thaliana gb|M95594 and contains an aminotransferases class-I PF|00155 domain. EST gb|BE038138 comes from this gene|gi|12248011|gb|AAG50097.1|AF334719_1 1-aminocyclopropane-1-carboxylate synthase ACS2 [Arabidopsis thaliana]10030.01491
51
34
AF332429.1|.x
1
ref|NP_171661.1| protein serine/threonine kinase, putative; protein id: At1g01540.1, supported by cDNA: gi_12083265, supported by cDNA: gi_14194118, supported by cDNA: gi_20334727 [Arabidopsis thaliana]|gi|2505874|emb|CAA73303.1| putative kinase [Arabidopsis thaliana]|gi|12083266|gb|AAG48792.1|AF332429_1 putative protein serine/threonine kinase [Arabidopsis thaliana]8810.01419
58
39
N65332.x
1
gb|AAL32688.1| plasma membrane intrinsic protein 1C (transmembrane protein B) [Arabidopsis thaliana]|gi|25083740|gb|AAN72112.1| plasma membrane intrinsic protein 1C (transmembrane protein B) [Arabidopsis thaliana]1625e-41516
59
39
T13789.x
1
gb|AAL32688.1| plasma membrane intrinsic protein 1C (transmembrane protein B) [Arabidopsis thaliana]|gi|25083740|gb|AAN72112.1| plasma membrane intrinsic protein 1C (transmembrane protein B) [Arabidopsis thaliana]944e-19200
60
39
T45734.x
1
emb|CAA53476.1| plasma membrane intrinsic protein 1c [Arabidopsis thaliana]1732e-43509
61
39
AF348574.1|.x
1
ref|NP_171668.1| plasma membrane intrinsic protein 1c, putative; protein id: At1g01620.1, supported by cDNA: gi_13194765, supported by cDNA: gi_17065067 [Arabidopsis thaliana]|gi|1175012|sp|Q08733|WC1C_ARATH Plasma membrane intrinsic protein 1C (Transmembrane protein B) (TMP-B)|gi|25295700|pir||A86147 hypothetical protein F22L4.16 - Arabidopsis thaliana|gi|396218|emb|CAA49155.1| transmembrane protein TMP-B [Arabidopsis thaliana]|gi|8920598|gb|AAF81320.1|AC061957_16 Identical to a plasma membrane intrinsic protein 1C (transmembrane protein B) from Arabidopsis thaliana gi|1175012 and contains a major intrinsic protein PF|00230 domain. ESTs gb|AI993641, gb|AA597672, gb|H36675, gb|N65332, gb|N96473, gb|T43232, gb|H37074, gb|H36992, gb|N65343, gb|T44267, gb|T45734, gb|N97036, gb|H36897, gb|Z17730, gb|T22715, gb|T13917, gb|T14921 come from this gene|gi|13194766|gb|AAK15545.1|AF348574_1 putative plasma membrane intrinsic protein 1c [Arabidopsis thaliana]555e-157861
65
42
BE527162.f
1
gb|AAL14628.1|AF417575_1 growth-on protein GRO11 [Euphorbia esula]1098e-24269
67
44
At1g01680.f
1
ref|NP_171674.1| hypothetical protein; protein id: At1g01680.1 [Arabidopsis thaliana]546e-154849
68
44
BU635944.x
1
pir||F86147 hypothetical protein T1N6.5 [imported] - Arabidopsis thaliana|gi|8671835|gb|AAF78398.1|AC009273_4 Contains similarity to a putative protein T2J13.100 gi|6522560 from Arabidopsis thaliana BAC T2J13 gb|AL132967458e-130806
70
45
AV534454.r
1
pir||G86147 protein T1N6.6 [imported] - Arabidopsis thaliana|gi|8671857|gb|AAF78420.1|AC009273_26 T1N6.6 [Arabidopsis thaliana]1335e-31348
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