Seed Cluster Table

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missmath polyA/T blast hit
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total hit 35462
Id No 0 to 19 [Next 20]

NoCluster IdContig IdFragmentshomology search resultscoree-valueconsensus lengthover view
1
1
PTA.sd.1.C1
4
ref|NP_171612.1| DEAD/DEAH box helicase carpel factory (CAF); protein id: At1g01040.1, supported by cDNA: gi_11559644, supported by cDNA: gi_6102609 [Arabidopsis thaliana]|gi|11559645|gb|AAG38019.1|AF292940_1 short integuments 1 [Arabidopsis thaliana]|gi|11559647|gb|AAG38020.1|AF292941_1 short integuments 1 [Arabidopsis thaliana]27210.05818
4
3
PTA.sd.3.C1
19
ref|NP_171614.1| DNA-binding protein, putative; protein id: At1g01060.1 [Arabidopsis thaliana]10440.02538
5
4
PTA.sd.4.C1
3
ref|NP_563617.1| expressed protein; protein id: At1g01070.1, supported by cDNA: 20749. [Arabidopsis thaliana]6790.01310
8
6
PTA.sd.6.C1
37
ref|NP_171617.1| pyruvate dehydrogenase E1 alpha subunit; protein id: At1g01090.1, supported by cDNA: gi_15450706, supported by cDNA: gi_17380621, supported by cDNA: gi_2454181 [Arabidopsis thaliana]|gi|2454182|gb|AAB86803.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana]|gi|15450707|gb|AAK96625.1| At1g01090/T25K16_8 [Arabidopsis thaliana]|gi|17380622|gb|AAL36074.1| At1g01090/T25K16_8 [Arabidopsis thaliana]7940.01594
9
6
AY063724.f
1
ref|NP_171617.1| pyruvate dehydrogenase E1 alpha subunit; protein id: At1g01090.1, supported by cDNA: gi_15450706, supported by cDNA: gi_17380621, supported by cDNA: gi_2454181 [Arabidopsis thaliana]|gi|2454182|gb|AAB86803.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana]|gi|15450707|gb|AAK96625.1| At1g01090/T25K16_8 [Arabidopsis thaliana]|gi|17380622|gb|AAL36074.1| At1g01090/T25K16_8 [Arabidopsis thaliana]7940.01287
12
8
PTA.sd.8.C1
2
gb|AAF26462.1|AC007323_3 T25K16.10 [Arabidopsis thaliana]8880.01775
13
9
PTA.sd.9.C1
21
ref|NP_171620.2| fatty acid elongase 3-ketoacyl-CoA synthase 1; protein id: At1g01120.1, supported by cDNA: gi_18377663, supported by cDNA: gi_20465992 [Arabidopsis thaliana]|gi|25406715|pir||F86141 protein T25K16.11 [imported] - Arabidopsis thaliana|gi|6715643|gb|AAF26470.1|AC007323_11 T25K16.11 [Arabidopsis thaliana]|gi|18377664|gb|AAL66982.1| putative fatty acid elongase 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]|gi|20465993|gb|AAM20218.1| putative fatty acid elongase 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]10000.01901
14
10
PTA.sd.10.C1
14
gb|AAK62444.1|AF386999_1 similar to wpk4 protein kinase [Arabidopsis thaliana]|gi|20259788|gb|AAM13241.1| similar to wpk4 protein kinase [Arabidopsis thaliana]8220.01689
20
13
At1g01180.f
1
ref|NP_171626.1| hypothetical protein; protein id: At1g01180.1 [Arabidopsis thaliana]|gi|25406717|pir||A86142 protein T25K16.17 [imported] - Arabidopsis thaliana|gi|6715637|gb|AAF26464.1|AC007323_5 T25K16.17 [Arabidopsis thaliana]9460.01437
26
16
PTA.sd.16.C1
2
ref|NP_563620.1| hypothetical protein; protein id: At1g01220.1 [Arabidopsis thaliana]20630.03849
31
20
PTA.sd.20.C1
9
ref|NP_171634.1| bHLH protein; protein id: At1g01260.1, supported by cDNA: gi_18026973, supported by cDNA: gi_19310466, supported by cDNA: gi_20127008 [Arabidopsis thaliana]|gi|25350156|pir||H86142 F6F3.7 protein - Arabidopsis thaliana|gi|9665138|gb|AAF97322.1|AC023628_3 Similar to transcription factors [Arabidopsis thaliana]|gi|18026974|gb|AAL55720.1|AF251698_1 putative transcription factor BHLH13 [Arabidopsis thaliana]|gi|19310467|gb|AAL84968.1| At1g01260/F6F3_25 [Arabidopsis thaliana]|gi|21539515|gb|AAM53310.1| transcription factor MYC7E, putative [Arabidopsis thaliana]9960.02578
32
21
PTA.sd.21.C1
3
ref|NP_171635.1| cytochrome p450 family; protein id: At1g01280.1 [Arabidopsis thaliana]|gi|25282580|pir||A86143 probable cytochrome P450 [imported] - Arabidopsis thaliana|gi|9665139|gb|AAF97323.1|AC023628_4 Putative cytochrome P450 [Arabidopsis thaliana]8820.01579
33
22
PTA.sd.22.C1
27
ref|NP_171637.1| chloroplast nucleoid DNA binding protein, putative; protein id: At1g01300.1, supported by cDNA: 7567. [Arabidopsis thaliana]|gi|25518405|pir||C86143 hypothetical protein F6F3.10 - Arabidopsis thaliana|gi|9665144|gb|AAF97328.1|AC023628_9 Unknown protein [Arabidopsis thaliana]|gi|22135930|gb|AAM91547.1| chloroplast nucleoid DNA binding protein, putative [Arabidopsis thaliana]8120.01847
34
23
PTA.sd.23.C1
14
ref|NP_171639.1| hypothetical protein; protein id: At1g01320.1 [Arabidopsis thaliana]18980.03512
35
24
PTA.sd.24.C1
4
gb|AAM97072.1| putative protein [Arabidopsis thaliana]|gi|23198042|gb|AAN15548.1| putative protein [Arabidopsis thaliana]6740.01995
39
27
PTA.sd.27.C1
6
ref|NP_171646.1| flavonol 3-o-glucosyltransferase, putative; protein id: At1g01390.1, supported by cDNA: gi_17065183 [Arabidopsis thaliana]|gi|17065184|gb|AAL32746.1| Putative UTP-glucose glucosyltransferase [Arabidopsis thaliana]|gi|27311947|gb|AAO00939.1| Putative UTP-glucose glucosyltransferase [Arabidopsis thaliana]9390.01688
40
28
PTA.sd.28.C1
10
ref|NP_171650.1| hypothetical protein; protein id: At1g01430.1 [Arabidopsis thaliana]|gi|25518737|pir||H86144 hypothetical protein F6F3.23 [imported] - Arabidopsis thaliana|gi|9665154|gb|AAF97338.1|AC023628_19 Unknown protein [Arabidopsis thaliana]8850.01481
44
30
PTA.sd.30.C1
8
ref|NP_171655.1| 1-aminocyclopropane-1-carboxylate synthase (ACC synthase); protein id: At1g01480.1, supported by cDNA: gi_12248010, supported by cDNA: gi_166579 [Arabidopsis thaliana]|gi|543712|sp|Q06402|1A12_ARATH 1-aminocyclopropane-2-carboxylate synthase 2 (ACC synthase 2) (S-adenosyl-L-methionine methylthioadenosine-lyase 2)|gi|476924|pir||A47199 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) - Arabidopsis thaliana|gi|16148|emb|CAA78260.1| 1-aminocyclopropane 1-carboxylate synthase [Arabidopsis thaliana]|gi|166580|gb|AAB59298.1| 1-aminocyclopropane-1-carboxylate synthase|gi|2505881|emb|CAA73310.1| ACC-synthase [Arabidopsis thaliana]|gi|8920586|gb|AAF81308.1|AC061957_4 Identical to 1-aminocyclopropane-1-carboxylate synthase (ASC2) from Arabidopsis thaliana gb|M95594 and contains an aminotransferases class-I PF|00155 domain. EST gb|BE038138 comes from this gene|gi|12248011|gb|AAG50097.1|AF334719_1 1-aminocyclopropane-1-carboxylate synthase ACS2 [Arabidopsis thaliana]8840.01736
45
30
At1g01480.f
1
ref|NP_171655.1| 1-aminocyclopropane-1-carboxylate synthase (ACC synthase); protein id: At1g01480.1, supported by cDNA: gi_12248010, supported by cDNA: gi_166579 [Arabidopsis thaliana]|gi|543712|sp|Q06402|1A12_ARATH 1-aminocyclopropane-2-carboxylate synthase 2 (ACC synthase 2) (S-adenosyl-L-methionine methylthioadenosine-lyase 2)|gi|476924|pir||A47199 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) - Arabidopsis thaliana|gi|16148|emb|CAA78260.1| 1-aminocyclopropane 1-carboxylate synthase [Arabidopsis thaliana]|gi|166580|gb|AAB59298.1| 1-aminocyclopropane-1-carboxylate synthase|gi|2505881|emb|CAA73310.1| ACC-synthase [Arabidopsis thaliana]|gi|8920586|gb|AAF81308.1|AC061957_4 Identical to 1-aminocyclopropane-1-carboxylate synthase (ASC2) from Arabidopsis thaliana gb|M95594 and contains an aminotransferases class-I PF|00155 domain. EST gb|BE038138 comes from this gene|gi|12248011|gb|AAG50097.1|AF334719_1 1-aminocyclopropane-1-carboxylate synthase ACS2 [Arabidopsis thaliana]10030.01491
46
30
AF334719.1|.x
1
ref|NP_171655.1| 1-aminocyclopropane-1-carboxylate synthase (ACC synthase); protein id: At1g01480.1, supported by cDNA: gi_12248010, supported by cDNA: gi_166579 [Arabidopsis thaliana]|gi|543712|sp|Q06402|1A12_ARATH 1-aminocyclopropane-2-carboxylate synthase 2 (ACC synthase 2) (S-adenosyl-L-methionine methylthioadenosine-lyase 2)|gi|476924|pir||A47199 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14) - Arabidopsis thaliana|gi|16148|emb|CAA78260.1| 1-aminocyclopropane 1-carboxylate synthase [Arabidopsis thaliana]|gi|166580|gb|AAB59298.1| 1-aminocyclopropane-1-carboxylate synthase|gi|2505881|emb|CAA73310.1| ACC-synthase [Arabidopsis thaliana]|gi|8920586|gb|AAF81308.1|AC061957_4 Identical to 1-aminocyclopropane-1-carboxylate synthase (ASC2) from Arabidopsis thaliana gb|M95594 and contains an aminotransferases class-I PF|00155 domain. EST gb|BE038138 comes from this gene|gi|12248011|gb|AAG50097.1|AF334719_1 1-aminocyclopropane-1-carboxylate synthase ACS2 [Arabidopsis thaliana]10030.01491
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