Seed Cluster Table

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missmath polyA/T blast hit
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total hit 35462
Id No 0 to 19 [Next 20]

NoCluster IdContig IdFragmentshomology search resultscoree-valueconsensus lengthover view
1
1
PTA.sd.1.C1
4
ref|NP_171612.1| DEAD/DEAH box helicase carpel factory (CAF); protein id: At1g01040.1, supported by cDNA: gi_11559644, supported by cDNA: gi_6102609 [Arabidopsis thaliana]|gi|11559645|gb|AAG38019.1|AF292940_1 short integuments 1 [Arabidopsis thaliana]|gi|11559647|gb|AAG38020.1|AF292941_1 short integuments 1 [Arabidopsis thaliana]27210.05818
2
2
PTA.sd.2.C1
23
ref|NP_171613.1| soluble inorganic pyrophosphatase, putative; protein id: At1g01050.1, supported by cDNA: 124537., supported by cDNA: gi_15450698, supported by cDNA: gi_16323128, supported by cDNA: gi_17473934, supported by cDNA: gi_20148452 [Arabidopsis thaliana]|gi|15450699|gb|AAK96621.1| At1g01050/T25K16_5 [Arabidopsis thaliana]|gi|16323129|gb|AAL15299.1| At1g01050/T25K16_5 [Arabidopsis thaliana]|gi|17473935|gb|AAL38377.1| putative inorganic pyrophosphatase [Arabidopsis thaliana]|gi|20148453|gb|AAM10117.1| putative inorganic pyrophosphatase [Arabidopsis thaliana]|gi|21537232|gb|AAM61573.1| soluble inorganic pyrophosphatase, putative [Arabidopsis thaliana]|gi|24797046|gb|AAN64535.1| At1g01050/T25K16_5 [Arabidopsis thaliana]431e-120960
3
2
PTA.sd.2.C2
6
ref|NP_192057.1| putative inorganic phosphatase; protein id: At4g01480.1, supported by cDNA: gi_15450871, supported by cDNA: gi_20148676 [Arabidopsis thaliana]|gi|7436033|pir||T01946 inorganic pyrophosphatase homolog F11O4.12 - Arabidopsis thaliana|gi|3695383|gb|AAC62786.1| similar to inorganic pyrophosphatase (Pfam: PF00719 Pyrophosphatase, E-value: 2.7e-88) [Arabidopsis thaliana]|gi|7268191|emb|CAB77718.1| putative inorganic phosphatase [Arabidopsis thaliana]|gi|15450872|gb|AAK96707.1| similar to inorganic pyrophosphatase [Arabidopsis thaliana]|gi|20148677|gb|AAM10229.1| similar to inorganic pyrophosphatase [Arabidopsis thaliana]441e-1221011
4
3
PTA.sd.3.C1
19
ref|NP_171614.1| DNA-binding protein, putative; protein id: At1g01060.1 [Arabidopsis thaliana]10440.02538
5
4
PTA.sd.4.C1
3
ref|NP_563617.1| expressed protein; protein id: At1g01070.1, supported by cDNA: 20749. [Arabidopsis thaliana]6790.01310
6
5
PTA.sd.5.C1
9
ref|NP_171616.1| chloroplast RNA-binding protein cp33, putative; protein id: At1g01080.1, supported by cDNA: 21739., supported by cDNA: gi_16930400 [Arabidopsis thaliana]|gi|16930401|gb|AAL31886.1|AF419554_1 At1g01080/T25K16_7 [Arabidopsis thaliana]|gi|21554268|gb|AAM63343.1| ribonucleoprotein, putative [Arabidopsis thaliana]|gi|22135777|gb|AAM91045.1| At1g01080/T25K16_7 [Arabidopsis thaliana]265e-1231272
7
5
AY132012.f
1
ref|NP_171616.1| chloroplast RNA-binding protein cp33, putative; protein id: At1g01080.1, supported by cDNA: 21739., supported by cDNA: gi_16930400 [Arabidopsis thaliana]|gi|16930401|gb|AAL31886.1|AF419554_1 At1g01080/T25K16_7 [Arabidopsis thaliana]|gi|21554268|gb|AAM63343.1| ribonucleoprotein, putative [Arabidopsis thaliana]|gi|22135777|gb|AAM91045.1| At1g01080/T25K16_7 [Arabidopsis thaliana]461e-129882
8
6
PTA.sd.6.C1
37
ref|NP_171617.1| pyruvate dehydrogenase E1 alpha subunit; protein id: At1g01090.1, supported by cDNA: gi_15450706, supported by cDNA: gi_17380621, supported by cDNA: gi_2454181 [Arabidopsis thaliana]|gi|2454182|gb|AAB86803.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana]|gi|15450707|gb|AAK96625.1| At1g01090/T25K16_8 [Arabidopsis thaliana]|gi|17380622|gb|AAL36074.1| At1g01090/T25K16_8 [Arabidopsis thaliana]7940.01594
9
6
AY063724.f
1
ref|NP_171617.1| pyruvate dehydrogenase E1 alpha subunit; protein id: At1g01090.1, supported by cDNA: gi_15450706, supported by cDNA: gi_17380621, supported by cDNA: gi_2454181 [Arabidopsis thaliana]|gi|2454182|gb|AAB86803.1| pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana]|gi|15450707|gb|AAK96625.1| At1g01090/T25K16_8 [Arabidopsis thaliana]|gi|17380622|gb|AAL36074.1| At1g01090/T25K16_8 [Arabidopsis thaliana]7940.01287
10
7
PTA.sd.7.C1
9
ref|NP_199581.1| 60S acidic ribosomal protein P1-like protein; protein id: At5g47700.1, supported by cDNA: 14401., supported by cDNA: gi_17979076, supported by cDNA: gi_20465332 [Arabidopsis thaliana]|gi|10177906|dbj|BAB11317.1| 60S acidic ribosomal protein P1-like protein [Arabidopsis thaliana]|gi|17979077|gb|AAL49806.1| putative 60S acidic ribosomal protein P1 [Arabidopsis thaliana]|gi|20465333|gb|AAM20070.1| putative 60S acidic ribosomal protein P1 [Arabidopsis thaliana]1562e-37643
11
7
PTA.sd.7.C2
13
gb|AAM64427.1| acidic ribosomal protein, putative [Arabidopsis thaliana]1617e-39611
12
8
PTA.sd.8.C1
2
gb|AAF26462.1|AC007323_3 T25K16.10 [Arabidopsis thaliana]8880.01775
13
9
PTA.sd.9.C1
21
ref|NP_171620.2| fatty acid elongase 3-ketoacyl-CoA synthase 1; protein id: At1g01120.1, supported by cDNA: gi_18377663, supported by cDNA: gi_20465992 [Arabidopsis thaliana]|gi|25406715|pir||F86141 protein T25K16.11 [imported] - Arabidopsis thaliana|gi|6715643|gb|AAF26470.1|AC007323_11 T25K16.11 [Arabidopsis thaliana]|gi|18377664|gb|AAL66982.1| putative fatty acid elongase 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]|gi|20465993|gb|AAM20218.1| putative fatty acid elongase 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]10000.01901
14
10
PTA.sd.10.C1
14
gb|AAK62444.1|AF386999_1 similar to wpk4 protein kinase [Arabidopsis thaliana]|gi|20259788|gb|AAM13241.1| similar to wpk4 protein kinase [Arabidopsis thaliana]8220.01689
15
11
PTA.sd.11.C1
13
ref|NP_563619.1| expressed protein; protein id: At1g01160.1, supported by cDNA: gi_15294231, supported by cDNA: gi_20857111 [Arabidopsis thaliana]|gi|25406716|pir||H86141 protein T25K16.15 [imported] - Arabidopsis thaliana|gi|6715636|gb|AAF26463.1|AC007323_4 T25K16.15 [Arabidopsis thaliana]|gi|15294232|gb|AAK95293.1|AF410307_1 At1g01160/F6F3_1 [Arabidopsis thaliana]|gi|20857112|gb|AAM26700.1| At1g01160/F6F3_1 [Arabidopsis thaliana]|gi|21539892|gb|AAM52882.1| putative transcription co-activator [Arabidopsis thaliana]2281e-581004
16
11
AY102133.f
1
ref|NP_563619.1| expressed protein; protein id: At1g01160.1, supported by cDNA: gi_15294231, supported by cDNA: gi_20857111 [Arabidopsis thaliana]|gi|25406716|pir||H86141 protein T25K16.15 [imported] - Arabidopsis thaliana|gi|6715636|gb|AAF26463.1|AC007323_4 T25K16.15 [Arabidopsis thaliana]|gi|15294232|gb|AAK95293.1|AF410307_1 At1g01160/F6F3_1 [Arabidopsis thaliana]|gi|20857112|gb|AAM26700.1| At1g01160/F6F3_1 [Arabidopsis thaliana]|gi|21539892|gb|AAM52882.1| putative transcription co-activator [Arabidopsis thaliana]2284e-59588
17
11
AV821553.f
1
ref|NP_563619.1| expressed protein; protein id: At1g01160.1, supported by cDNA: gi_15294231, supported by cDNA: gi_20857111 [Arabidopsis thaliana]|gi|25406716|pir||H86141 protein T25K16.15 [imported] - Arabidopsis thaliana|gi|6715636|gb|AAF26463.1|AC007323_4 T25K16.15 [Arabidopsis thaliana]|gi|15294232|gb|AAK95293.1|AF410307_1 At1g01160/F6F3_1 [Arabidopsis thaliana]|gi|20857112|gb|AAM26700.1| At1g01160/F6F3_1 [Arabidopsis thaliana]|gi|21539892|gb|AAM52882.1| putative transcription co-activator [Arabidopsis thaliana]321.9364
18
12
PTA.sd.12.C1
6
dbj|BAC42821.1| unknown protein [Arabidopsis thaliana]1757e-43737
19
12
At1g01170.f
1
gb|AAF26466.1|AC007323_7 T25K16.16 [Arabidopsis thaliana]2021e-51294
20
13
At1g01180.f
1
ref|NP_171626.1| hypothetical protein; protein id: At1g01180.1 [Arabidopsis thaliana]|gi|25406717|pir||A86142 protein T25K16.17 [imported] - Arabidopsis thaliana|gi|6715637|gb|AAF26464.1|AC007323_5 T25K16.17 [Arabidopsis thaliana]9460.01437
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