Seed Cluster Table

Back to Top Page
missmath polyA/T blast hit
Key Words Search
Start Record

total hit 35462
Id No 0 to 19 [Next 20]

NoCluster IdContig IdFragmentshomology search resultscoree-valueconsensus lengthover view
20545
9486
PTA.sd.9486.C2
148
ref|NP_566875.1| lipoxygenase AtLOX2; protein id: At3g45140.1, supported by cDNA: gi_17065069, supported by cDNA: gi_431257 [Arabidopsis thaliana]|gi|585421|sp|P38418|LOXC_ARATH Lipoxygenase, chloroplast precursor|gi|541879|pir||JQ2391 lipoxygenase (EC 1.13.11.12) Lox2 - Arabidopsis thaliana|gi|431258|gb|AAA32749.1| lipoxygenase18090.02836
18080
8117
PTA.sd.8117.C1
143
ref|NP_187819.1| omega-6 fatty acid desaturase, endoplasmic reticulum (FAD2)(delta-12 desaturase); protein id: At3g12120.1 [Arabidopsis thaliana]|gi|1169598|sp|P46313|FD6E_ARATH Omega-6 fatty acid desaturase, endoplasmic reticulum (Delta-12 desaturase)|gi|438451|gb|AAA32782.1| delta-12 desaturase|gi|9294109|dbj|BAB01960.1| omega-6 fatty acid desaturase, endoplasmic reticulum (delta-12 desaturase) [Arabidopsis thaliana]|gi|12322004|gb|AAG51042.1|AC069473_4 omega-6 fatty acid desaturase, endoplasmic reticulum (FAD2); 20389-21540 [Arabidopsis thaliana]|gi|14517474|gb|AAK62627.1| AT3g12120/T21B14_107 [Arabidopsis thaliana]|gi|22655458|gb|AAM98321.1| At3g12120/T21B14_107 [Arabidopsis thaliana]7980.01547
17447
7863
PTA.sd.7863.C2
140
ref|NP_187470.1| adenylate translocator; protein id: At3g08580.2, supported by cDNA: 36818., supported by cDNA: gi_14334483, supported by cDNA: gi_14596052, supported by cDNA: gi_15809959, supported by cDNA: gi_18491188 [Arabidopsis thaliana]|gi|19883932|sp|P31167|ADT1_ARATH ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP translocase 1) (Adenine nucleotide translocator 1) (ANT 1)|gi|12322734|gb|AAG51358.1|AC012562_19 adenylate translocator; 17953-16629 [Arabidopsis thaliana]|gi|14334484|gb|AAK59440.1| putative adenylate translocator protein [Arabidopsis thaliana]|gi|14596053|gb|AAK68754.1| adenylate translocator [Arabidopsis thaliana]|gi|15809960|gb|AAL06907.1| AT3g08580/F17O14_5 [Arabidopsis thaliana]|gi|18491189|gb|AAL69497.1| putative adenylate translocator protein [Arabidopsis thaliana]|gi|23198346|gb|AAN15700.1| adenylate translocator [Arabidopsis thaliana]|gi|27311563|gb|AAO00747.1| adenylate translocator [Arabidopsis thaliana]7160.01572
28163
13371
PTA.sd.13371.C1
140
ref|NP_568049.1| putative fructose-bisphosphate aldolase; protein id: At4g38970.1, supported by cDNA: gi_16226652 [Arabidopsis thaliana]7830.01497
14564
6373
PTA.sd.6373.C1
132
ref|NP_181192.1| enolase (2-phospho-D-glycerate hydroylase); protein id: At2g36530.1, supported by cDNA: gi_15809969, supported by cDNA: gi_15983457, supported by cDNA: gi_16226234, supported by cDNA: gi_18175727, supported by cDNA: gi_20260173 [Arabidopsis thaliana]|gi|119350|sp|P25696|ENO_ARATH Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase)|gi|81608|pir||JQ1187 phosphopyruvate hydratase (EC 4.2.1.11) - Arabidopsis thaliana|gi|16271|emb|CAA41114.1| enolase [Arabidopsis thaliana]|gi|4581151|gb|AAD24635.1| enolase (2-phospho-D-glycerate hydroylase) [Arabidopsis thaliana]|gi|15983458|gb|AAL11597.1|AF424603_1 At2g36530/F1O11.16 [Arabidopsis thaliana]|gi|23297411|gb|AAN12963.1| enolase (2-phospho-D-glycerate hydroylase) [Arabidopsis thaliana]8830.01740
16745
7402
PTA.sd.7402.C1
131
ref|NP_186896.1| S-adenosylmethionine decarboxylase; protein id: At3g02470.1, supported by cDNA: gi_14596072, supported by cDNA: gi_15809835, supported by cDNA: gi_16226704 [Arabidopsis thaliana]|gi|19864681|sp|Q96286|DCA1_ARATH S-adenosylmethionine decarboxylase proenzyme 1 (AdoMetDC 1) (SamDC 1) [Contains: S-adenosylmethionine decarboxylase 1 alpha chain; S-adenosylmethionine decarboxylase 1 beta chain]|gi|6957710|gb|AAF32454.1| S-adenosylmethionine decarboxylase [Arabidopsis thaliana]|gi|14596073|gb|AAK68764.1| S-adenosylmethionine decarboxylase [Arabidopsis thaliana]|gi|16226705|gb|AAL16237.1|AF428468_1 AT3g02470/F16B3_10 [Arabidopsis thaliana]|gi|20148235|gb|AAM10008.1| S-adenosylmethionine decarboxylase [Arabidopsis thaliana]6700.01881
21357
10001
PTA.sd.10001.C1
131
ref|NP_190861.1| fructose bisphosphate aldolase - like protein; protein id: At3g52930.1, supported by cDNA: 3447., supported by cDNA: gi_15450682, supported by cDNA: gi_16323104, supported by cDNA: gi_17380609 [Arabidopsis thaliana]|gi|11268083|pir||T47550 fructose bisphosphate aldolase-like protein - Arabidopsis thaliana|gi|7529717|emb|CAB86897.1| fructose bisphosphate aldolase-like protein [Arabidopsis thaliana]|gi|15450683|gb|AAK96613.1| AT3g52930/F8J2_100 [Arabidopsis thaliana]|gi|16323105|gb|AAL15287.1| AT3g52930/F8J2_100 [Arabidopsis thaliana]|gi|17380610|gb|AAL36068.1| AT3g52930/F8J2_100 [Arabidopsis thaliana]|gi|21592946|gb|AAM64896.1| fructose bisphosphate aldolase-like protein [Arabidopsis thaliana]7100.01473
16980
7515
PTA.sd.7515.C1
130
ref|NP_197294.1| 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; protein id: At5g17920.1, supported by cDNA: gi_13877642, supported by cDNA: gi_15081617, supported by cDNA: gi_15810168, supported by cDNA: gi_15982742, supported by cDNA: gi_15982784, supported by cDNA: gi_17978929, supported by cDNA: gi_17979546, supported by cDNA: gi_20147148, supported by cDNA: gi_2738247 [Arabidopsis thaliana]|gi|8134566|sp|O50008|METE_ARATH 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (Vitamin-B12-independent methionine synthase isozyme) (Cobalamin-independent methionine synthase isozyme)|gi|2738248|gb|AAC50037.1| cobalamin-independent methionine synthase [Arabidopsis thaliana]|gi|10177894|dbj|BAB11226.1| cobalamin-independent methionine synthase [Arabidopsis thaliana]|gi|13877643|gb|AAK43899.1|AF370522_1 cobalamin-independent methionine synthase [Arabidopsis thaliana]|gi|15081618|gb|AAK82464.1| AT5g17920/MPI7_60 [Arabidopsis thaliana]|gi|15810169|gb|AAL06986.1| AT5g17920/MPI7_60 [Arabidopsis thaliana]|gi|15982785|gb|AAL09740.1| AT5g17920/MPI7_60 [Arabidopsis thaliana]|gi|17978930|gb|AAL47432.1| AT5g17920/MPI7_60 [Arabidopsis thaliana]|gi|17979547|gb|AAL50108.1| AT5g17920/MPI7_60 [Arabidopsis thaliana]|gi|20147149|gb|AAM10291.1| AT5g17920/MPI7_60 [Arabidopsis thaliana]14570.02658
357
214
PTA.sd.214.C1
129
ref|NP_171884.1| putative cruciferin 12S seed storage protein; protein id: At1g03880.1, supported by cDNA: gi_20260211 [Arabidopsis thaliana]|gi|21542382|sp|P15456|12S2_ARATH 12S seed storage protein precursor|gi|25296169|pir||E86169 12S seed storage protein [imported] - Arabidopsis thaliana|gi|4204299|gb|AAD10680.1| 12S seed storage protein [Arabidopsis thaliana]|gi|20260212|gb|AAM13004.1| 12S seed storage protein [Arabidopsis thaliana]8340.01630
19963
9169
PTA.sd.9169.C1
129
ref|NP_189283.1| gamma tonoplast intrinsic protein; protein id: At3g26520.1, supported by cDNA: gi_16226820, supported by cDNA: gi_16930518, supported by cDNA: gi_19310528, supported by cDNA: gi_3688798 [Arabidopsis thaliana]|gi|9293929|dbj|BAB01832.1| salt-stress induced tonoplast intrinsic protein [Arabidopsis thaliana]|gi|16226821|gb|AAL16271.1|AF428341_1 AT3g26520/MFE16_3 [Arabidopsis thaliana]|gi|16930519|gb|AAL31945.1|AF419613_1 AT3g26520/MFE16_3 [Arabidopsis thaliana]|gi|19310529|gb|AAL84998.1| AT3g26520/MFE16_3 [Arabidopsis thaliana]476e-1331149
34016
16514
PTA.sd.16514.C1
127
ref|NP_200238.1| light-harvesting chlorophyll a/b binding protein, putative; protein id: At5g54270.1, supported by cDNA: gi_13605753, supported by cDNA: gi_13926338, supported by cDNA: gi_16323261, supported by cDNA: gi_4741951, supported by cDNA: gi_5002209 [Arabidopsis thaliana]|gi|25299027|pir||T52318 chlorophyll a/b-binding protein type III [imported] - Arabidopsis thaliana|gi|4741952|gb|AAD28773.1|AF134126_1 Lhcb3 protein [Arabidopsis thaliana]|gi|5002210|gb|AAD37362.1|AF143691_1 type III chlorophyll a/b binding protein [Arabidopsis thaliana]|gi|9759500|dbj|BAB10750.1| Lhcb3 chlorophyll a/b binding protein [Arabidopsis thaliana]|gi|13605754|gb|AAK32870.1|AF361858_1 AT5g54270/MDK4_9 [Arabidopsis thaliana]|gi|13926339|gb|AAK49633.1|AF372917_1 AT5g54270/MDK4_9 [Arabidopsis thaliana]|gi|16323262|gb|AAL15365.1| AT5g54270/MDK4_9 [Arabidopsis thaliana]546e-1541078
15231
6623
PTA.sd.6623.C1
124
ref|NP_565913.1| auxin-regulated protein; protein id: At2g39730.1, supported by cDNA: 7114., supported by cDNA: gi_13358237, supported by cDNA: gi_15450378, supported by cDNA: gi_15810187 [Arabidopsis thaliana]|gi|12643259|sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast precursor (RuBisCO activase) (RA)|gi|7438143|pir||T01002 ribulose-bisphosphate carboxylase activase (EC 6.3.4.-) At2g39730, splice form 1 - Arabidopsis thaliana|gi|166834|gb|AAA20202.1| ribulose bisphosphate carboxylase/oxygenase activase|gi|2642155|gb|AAB87122.1| expressed protein [Arabidopsis thaliana]|gi|11762250|gb|AAG40401.1|AF325049_1 At2g39730 [Arabidopsis thaliana]|gi|15810188|gb|AAL06995.1| At2g39730/T5I7.3_ [Arabidopsis thaliana]|gi|21594581|gb|AAM66023.1| unknown [Arabidopsis thaliana]9310.01809
12370
4915
PTA.sd.4915.C1
122
ref|NP_178969.1| alanine-glyoxylate aminotransferase; protein id: At2g13360.1, supported by cDNA: 8306., supported by cDNA: gi_12082306, supported by cDNA: gi_20465424, supported by cDNA: gi_21281088, supported by cDNA: gi_3288820 [Arabidopsis thaliana]|gi|25287370|pir||T52250 probable alanine-glyoxylate transaminase (EC 2.6.1.44) [imported] - Arabidopsis thaliana|gi|3288821|gb|AAC26854.1| alanine:glyoxylate aminotransferase; transaminase [Arabidopsis thaliana]|gi|4733989|gb|AAD28669.1| alanine-glyoxylate aminotransferase [Arabidopsis thaliana]|gi|12082307|dbj|BAB20811.1| serine glyoxylate aminotransferase [Arabidopsis thaliana]|gi|20465425|gb|AAM20136.1| putative alanine-glyoxylate aminotransferase [Arabidopsis thaliana]|gi|21281089|gb|AAM45058.1| putative alanine-glyoxylate aminotransferase [Arabidopsis thaliana]7770.01494
25122
12028
PTA.sd.12028.C1
122
pir||T05478 peroxidase (EC 1.11.1.7) prxr1 - Arabidopsis thaliana|gi|2894574|emb|CAA17163.1| peroxidase prxr1 [Arabidopsis thaliana]|gi|7269041|emb|CAB79151.1| peroxidase prxr1 [Arabidopsis thaliana]6570.01444
2936
1122
PTA.sd.1122.C1
121
ref|NP_173021.1| inorganic pyrophosphatase, putative; protein id: At1g15690.1, supported by cDNA: gi_166633, supported by cDNA: gi_18086403, supported by cDNA: gi_19310432 [Arabidopsis thaliana]|gi|399091|sp|P31414|AVP3_ARATH Pyrophosphate-energized vacuolar membrane proton pump (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase)|gi|282878|pir||A38230 inorganic diphosphatase (EC 3.6.1.1), H+-translocating pyrophosphate-energized - Arabidopsis thaliana|gi|166634|gb|AAA32754.1| vacuolar H+-phosphatase|gi|8927648|gb|AAF82139.1|AC034256_3 Identical to Vacuolar proton pyrophosphatase (AVP3) from Arabidopsis thaliana gb|AB015138 and gb|M81892. ESTs gb|AA006922, gb|AA586042, gb|AA651053, gb|AA712863, gb|AA394384, gb|AA605347, gb|AA006474, gb|AA006772, gb|AA650817, gb|AA042538, gb|AA006217, gb|AW004149, gb|H36252, gb|H36659, gb|R30444, gb|W43600, gb|W43886, gb|W43517, gb|W43127, gb|N96656, gb|T14167, gb|T76140, gb|T21188, gb|Z17694, gb|Z17695 come from this gene|gi|27311751|gb|AAO00841.1| Unknown protein [Arabidopsis thaliana]13920.02703
24030
11468
PTA.sd.11468.C1
121
ref|NP_193130.1| adenosylhomocysteinase; protein id: At4g13940.1, supported by cDNA: 16846., supported by cDNA: gi_13358226, supported by cDNA: gi_14596156, supported by cDNA: gi_15146275, supported by cDNA: gi_19699157, supported by cDNA: gi_20148278, supported by cDNA: gi_3088578 [Arabidopsis thaliana]|gi|6174970|sp|O23255|SAHH_ARATH Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)|gi|7435510|pir||C71400 adenosylhomocysteinase (EC 3.3.1.1) [similarity] - Arabidopsis thaliana|gi|2244750|emb|CAB10173.1| adenosylhomocysteinase [Arabidopsis thaliana]|gi|3088579|gb|AAC14714.1| S-adenosyl-L-homocysteine hydrolase [Arabidopsis thaliana]|gi|7268098|emb|CAB78436.1| adenosylhomocysteinase [Arabidopsis thaliana]|gi|11762222|gb|AAG40389.1|AF325037_1 AT4g13940 [Arabidopsis thaliana]|gi|14596157|gb|AAK68806.1| adenosylhomocysteinase [Arabidopsis thaliana]|gi|15146276|gb|AAK83621.1| AT4g13940/dl3010w [Arabidopsis thaliana]|gi|19699158|gb|AAL90945.1| AT4g13940/dl3010w [Arabidopsis thaliana]|gi|20148279|gb|AAM10030.1| adenosylhomocysteinase [Arabidopsis thaliana]|gi|27311597|gb|AAO00764.1| adenosylhomocysteinase [Arabidopsis thaliana]9560.01867
2997
1134
PTA.sd.1134.C1
120
pir||T52314 chlorophyll a/b-binding protein Lhcb6 [imported] - Arabidopsis thaliana|gi|4741960|gb|AAD28777.1|AF134130_1 Lhcb6 protein [Arabidopsis thaliana]494e-1391111
30031
14347
PTA.sd.14347.C1
118
ref|NP_196867.1| cobalamin biosynthesis protein; protein id: At5g13630.1, supported by cDNA: gi_17978957, supported by cDNA: gi_18958006 [Arabidopsis thaliana]|gi|9758028|dbj|BAB08689.1| cobalamin biosynthesis protein [Arabidopsis thaliana]|gi|17978958|gb|AAL47483.1| AT5g13630/MSH12_9 [Arabidopsis thaliana]|gi|25141227|gb|AAN73308.1| At5g13630/MSH12_9 [Arabidopsis thaliana]27310.04467
949
493
PTA.sd.493.C1
117
pir||S20866 L-ascorbate peroxidase (EC 1.11.1.11) precursor - Arabidopsis thaliana (fragment)477e-1331119
3606
1470
PTA.sd.1470.C2
117
ref|NP_564120.1| catalase 3; protein id: At1g20620.1, supported by cDNA: 35868., supported by cDNA: gi_15912338, supported by cDNA: gi_16604411 [Arabidopsis thaliana]|gi|21903384|sp|Q42547|CAT3_ARATH Catalase 3|gi|15912339|gb|AAL08303.1| At1g20620/F5M15_4 [Arabidopsis thaliana]|gi|16604412|gb|AAL24212.1| At1g20620/F5M15_4 [Arabidopsis thaliana]10370.01779
[Next 20]