| No | Cluster Id | Contig Id | Fragments | homology search result | score | e-value | consensus length | over view | | |
|---|
| 34149 | 15458 | PTA.sd.15458.C1 | 9 | At5g23110.1 68418.m02703 zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) | 27990 | 0.0 | 14284 |  |
| 17315 | 7554 | PTA.sd.7554.C1 | 17 | At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly identical to auxin transport protein; BIG [Arabidopsis thaliana] GI:21779966; contains Pfam profiles PF02207: Putative zinc finger in N-recognin, PF00569: Zinc finger ZZ type | 25230 | 0.0 | 15423 |  |
| 7435 | 3042 | PTA.sd.3042.C1 | 18 | At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly identical to ubiquitin-protein ligase 1 [Arabidopsis thaliana] GI:7108521; E3, HECT-domain protein family; similar to GI:7108521, GB:AAF36454 from [Arabidopsis thaliana] | 23740 | 0.0 | 12017 |  |
| 22419 | 9898 | PTA.sd.9898.C1 | 3 | At3g48190.1 68416.m05257 ataxia-telangiectasia mutated protein (Atm) identical to ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana] GI:7529272; contains Pfam profile PF00855: PWWP domain; contains GA donor splice site at exon 73 | 23140 | 0.0 | 11703 |  |
| 12366 | 5223 | PTA.sd.5223.C1 | 5 | At2g17930.1 68415.m02076 FAT domain-containing protein / phosphatidylinositol 3- and 4-kinase family protein contains Pfam profiles PF02259 FAT domain, PF00454 Phosphatidylinositol 3- and 4-kinase, PF02260: FATC domain | 22730 | 0.0 | 11467 |  |
| 277 | 161 | PTA.sd.161.C1 | 4 | At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related similar to BEIGE (GI:3928547) [Rattus norvegicus]; Similar to gb|U70015 lysosomal trafficking regulator from Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta repeats. ESTs gb|T43386 and gb|AA395236 come from this gene | 22210 | 0.0 | 11220 |  |
| 10032 | 3887 | PTA.sd.3887.C1 | 20 | At1g70320.1 68414.m08090 ubiquitin-protein ligase 2 (UPL2) nearly identical to ubiquitin-protein ligase 2 [Arabidopsis thaliana] GI:7108523; E3, HECT-domain protein family; similar to ubiquitin-protein ligase 2 GI:7108523 from [Arabidopsis thaliana] | 21630 | 0.0 | 11197 |  |
| 34336 | 15587 | PTA.sd.15587.C1 | 3 | At5g24740.1 68418.m02920 expressed protein | 19720 | 0.0 | 10045 |  |
| 6653 | 2554 | PTA.sd.2554.C1 | 7 | At1g48090.2 68414.m05363 C2 domain-containing protein contains Pfam profile: PF00168 C2 domain | 19700 | 0.0 | 12300 |  |
| 24923 | 11271 | PTA.sd.11271.C1 | 2 | At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related contains Pfam PF00400: WD domain, G-beta repeat; similar to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal trafficking regulator - Bos taurus, EMBL: AF114785 | 19700 | 0.0 | 10469 |  |
| 22642 | 10051 | PTA.sd.10051.C1 | 10 | At3g50380.1 68416.m05511 expressed protein | 18370 | 0.0 | 9288 |  |
| 16622 | 7220 | PTA.sd.7220.C1 | 17 | At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related contains Pfam PF02138: Beige/BEACH domain; contains Pfam PF00400: WD domain, G-beta repeat (3 copies) | 18290 | 0.0 | 9228 |  |
| 36037 | 16088 | PTA.sd.16088.C1 | 11 | At5g40450.1 68418.m04905 expressed protein | 17320 | 0.0 | 8898 |  |
| 10251 | 4037 | PTA.sd.4037.C1 | 3 | At1g72270.1 68414.m08355 expressed protein | 16520 | 0.0 | 8334 |  |
| 7678 | 3140 | PTA.sd.3140.C1 | 7 | At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:719291) [Arabidopsis thaliana] | 16190 | 0.0 | 8223 |  |
| 11385 | 4646 | PTA.sd.4646.C1 | 30 | At1g80070.1 68414.m09373 splicing factor, putative strong similarity to splicing factor Prp8 [Homo sapiens] GI:3661610; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family | 14610 | 0.0 | 7386 |  |
| 34295 | 15559 | PTA.sd.15559.C1 | 2 | At5g24350.1 68418.m02870 expressed protein weak similarity to neuroblastoma-amplified protein [Homo sapiens] GI:4337460 | 14420 | 0.0 | 7280 |  |
| 16249 | 6968 | PTA.sd.6968.C1 | 7 | At2g42270.1 68415.m05232 U5 small nuclear ribonucleoprotein helicase, putative | 13680 | 0.0 | 6907 |  |
| 17170 | 7484 | PTA.sd.7484.C1 | 12 | At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG binding domain-containing protein contains Pfam profiles PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG binding domain | 13660 | 0.0 | 6933 |  |
| 30643 | 13757 | PTA.sd.13757.C1 | 2 | At4g38780.1 68417.m05491 splicing factor, putative strong similarity to splicing factor Prp8 [Homo sapiens] GI:3661610; contains Pfam profile PF01398: Mov34/MPN/PAD-1 family | 13280 | 0.0 | 7123 |  |
