Seed Cluster Table

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missmath polyA/T blast hit
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total hit 40046
Id No 1 to 20 [Next 20]

NoCluster IdContig IdFragmentshomology search resultscoree-valueconsensus lengthover view
6
5
AY132012.F
1
At1g01080.1 68414.m00010 33 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putative similar to 33 KDA RIBONUCLEOPROTEIN GB:P19684 from [Nicotiana sylvestris]17480.0882
8
6
AY063724.F
1
At1g01090.1 68414.m00011 pyruvate dehydrogenase E1 component alpha subunit, chloroplast identical to pyruvate dehydrogenase E1 alpha subunit GB:AAB86803 GI:2454182 from [Arabidopsis thaliana]; identical to cDNA pyruvate dehydrogenase E1 alpha subunit mRNA, nuclear gene encoding plastid protein GI:245418125510.01287
14
11
AV821553_RAFL04_13_H
1
At1g01160.1 68414.m00026 SSXT protein-related / transcription co-activator-related similar to SYT/SSX4 fusion protein (GI:11127695) [Homo sapiens]; supporting cDNA gi|21539891|gb|AY102640.1|; contains Pfam profile PF05030: SSXT protein (N-terminal region)577e-164364
15
11
AY102133.F
1
At1g01160.1 68414.m00026 SSXT protein-related / transcription co-activator-related similar to SYT/SSX4 fusion protein (GI:11127695) [Homo sapiens]; supporting cDNA gi|21539891|gb|AY102640.1|; contains Pfam profile PF05030: SSXT protein (N-terminal region)11660.0588
17
13
At1g01180.F
1
At1g01180.1 68414.m00030 expressed protein28490.01437
18
13
AU227148_RAFL14_83_E
1
At1g01180.1 68414.m00030 expressed protein6320.0437
19
13
AU236273_RAFL14_83_E
1
At1g01180.1 68414.m00030 expressed protein6700.0496
29
21
BT004517.F
1
At1g01260.1 68414.m00043 basic helix-loop-helix (bHLH) family protein contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain35150.01773
33
24
BT006619.F
1
At1g01300.1 68414.m00046 aspartyl protease family protein contains Pfam domain, PF00026: eukaryotic aspartyl protease28900.01458
37
27
BT006399.F
1
At1g01360.1 68414.m00051 expressed protein similar to hypothetical protein GB:CAB45785 GI:5262156 from [Arabidopsis thaliana]11180.0564
41
30
At1g01430.F
1
At1g01430.1 68414.m00058 expressed protein similar to hypothetical protein GB:CAB80917 GI:7267605 from [Arabidopsis thaliana]20760.01329
42
31
At1g01440.F
1
At1g01440.1 68414.m00059 extra-large G-protein-related weak similarity to extra-large G-protein (AtXLG1) (GI:3201682) [Arabidopsis thaliana]39550.01995
43
31
BT010599.F
1
At1g01440.1 68414.m00059 extra-large G-protein-related weak similarity to extra-large G-protein (AtXLG1) (GI:3201682) [Arabidopsis thaliana]39550.01995
46
33
At1g01480.F
1
At1g01480.1 68414.m00063 1-aminocyclopropane-1-carboxylate synthase 2 / ACC synthase 2 (ACS2) (ACC1) identical to 1-aminocyclopropane-1-carboxylate synthase SP|Q06402 [GI:166578] from [Arabidopsis thaliana]29560.01491
47
33
AF334719.F
1
At1g01480.1 68414.m00063 1-aminocyclopropane-1-carboxylate synthase 2 / ACC synthase 2 (ACS2) (ACC1) identical to 1-aminocyclopropane-1-carboxylate synthase SP|Q06402 [GI:166578] from [Arabidopsis thaliana]29560.01491
50
35
BT008724.F
1
At1g01500.1 68414.m00066 expressed protein identical to cDNA unknown protein GI:1922247 embY10087.119510.0984
53
37
AF332429.F
1
At1g01540.2 68414.m00071 protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR00229028130.01419
59
42
N65332.x
1
At1g01620.1 68414.m00079 plasma membrane intrinsic protein 1C (PIP1C) / aquaporin PIP1.3 (PIP1.3) / transmembrane protein B (TMPB) identical to plasma membrane intrinsic protein 1c SP:Q08733 from [Arabidopsis thaliana]555e-157516
60
42
T45734.x
1
At1g01620.1 68414.m00079 plasma membrane intrinsic protein 1C (PIP1C) / aquaporin PIP1.3 (PIP1.3) / transmembrane protein B (TMPB) identical to plasma membrane intrinsic protein 1c SP:Q08733 from [Arabidopsis thaliana]7100.0509
61
42
AF348574.F
1
At1g01620.1 68414.m00079 plasma membrane intrinsic protein 1C (PIP1C) / aquaporin PIP1.3 (PIP1.3) / transmembrane protein B (TMPB) identical to plasma membrane intrinsic protein 1c SP:Q08733 from [Arabidopsis thaliana]17070.0861
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