Non Seed Cluster Table

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missmath polyA/T blast hit
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total hit 5469
Id No 1 to 20 [Next 20]

NoCluster IdContig IdFragmentshomology search resultscoree-valueconsensus lengthover view
271
244
PTA.244.C1
3
At5g58140.3 68418.m07277 protein kinase family protein / non phototropic hypocotyl 1-like protein (NPL1) contains Pfam domains, PF00069: Protein kinase domain and PF00785: PAC motif; similar to SP:O48963 Nonphototropic hypocotyl protein 1 (Phototropin) [Mouse-ear cress] {Arabidopsis thaliana}; identical to cDNA non phototropic hypocotyl 1-like (NPL1) GI:539144155740.02837
158
145
PTA.145.C1
7
At3g49670.1 68416.m05429 leucine-rich repeat transmembrane protein kinase, putative CLAVATA1 receptor kinase, Arabidopsis thaliana, EMBL:ATU9687954000.03539
1380
1144
PTA.1144.C1
7
At5g49665.1 68418.m06148 zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain47460.02395
145
132
PTA.132.C1
9
At5g65683.1 68418.m08265 zinc finger (C3HC4-type RING finger) family protein contains Pfam profiles PF00097: Zinc finger, C3HC4 type (RING finger), PF00092: von Willebrand factor type A domain46740.02411
1515
1266
PTA.1266.C1
14
At2g45000.1 68415.m05603 expressed protein contains Pfam profile: PF05064 Nsp1-like C-terminal region46660.02372
1267
1035
PTA.1035.C1
5
At2g30575.1 68415.m03725 glycosyl transferase family 8 protein contains Pfam profile: PF01501 glycosyl transferase family 845400.02305
1366
1130
PTA.1130.C1
3
At1g38131.1 68414.m04669 expressed protein contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as \'growth regulator -related\' based on similarity to axi 1 protein (GB:X80301) (GI:559920) from [Nicotiana tabacum], which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497.44940.02269
1206
979
PTA.979.C1
37
At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2) similar to importin alpha 2 [Capsicum annuum] GI:13752562; contains Pfam profiles PF01749: Importin beta binding domain, PF00514: Armadillo/beta-catenin-like repeat; non-consensus GG donor splice site at exon 1 and 6; CT acceptor splice site at exon 239390.02215
874
749
PTA.749.C1
6
At3g02065.1 68416.m00171 DEAD/DEAH box helicase family protein contains Pfam profile: PF00270 DEAD/DEAH box helicase37270.01924
653
555
PTA.555.C1
7
At5g21482.1 68418.m02536 cytokinin oxidase, putative (CKX5) contains Pfam profile: PF01565 FAD binding domain; identical to cytokinin oxidase (CKX5) [Arabidopsis thaliana] gi|11120514|gb|AAG30908; similar to Swiss-Prot:Q9LTS3 cytokinin oxidase 3 precursor (CKO 3)[Arabidopsis thaliana]36630.01874
1174
951
PTA.951.C2
10
At5g25754.1 68418.m03054 expressed protein36520.01887
96
86
PTA.86.C1
11
At5g66675.1 68418.m08405 expressed protein36000.01847
892
764
PTA.764.C1
15
At4g39090.1 68417.m05535 cysteine proteinase RD19a (RD19A) / thiol protease identical to cysteine proteinase RD19a, thiol protease SP:P43296, GI:435618 from [Arabidopsis thaliana]35290.01816
507
453
PTA.453.C1
7
At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat family protein contains 7 WD-40 repeats (PF00400); similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo sapiens]35130.01776
817
699
PTA.699.C1
9
At5g21326.1 68418.m02534 protein kinase family protein / NAF domain-containing protein contains Pfam profiles: PF00069 protein kinase domain, PF03822 NAF domain35090.01796
915
785
PTA.785.C1
101
At3g02470.1 68416.m00235 adenosylmethionine decarboxylase family protein contains Pfam profile: PF01536 adenosylmethionine decarboxylase34710.01910
431
383
PTA.383.C1
4
At2g23093.1 68415.m02754 expressed protein34390.01743
285
256
PTA.256.C1
6
At5g49215.1 68418.m06092 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to polygalacturonase [Brassica napus] GI:1212786; contains PF00295: Glycosyl hydrolases family 2834270.01787
1324
1091
PTA.1091.C1
12
At1g45201.2 68414.m05185 lipase class 3 family protein Since this genomic sequence region is unfinished, the annotated gene may be missing a stop codon or start codon33640.01698
966
806
PTA.806.C1
47
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha identical to SWISS-PROT:P13905 elongation factor 1-alpha (EF-1-alpha) [Arabidopsis thaliana]33300.01751
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