BLASTX 1.5.4-Paracel [2003-06-05]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= CF774417.x
         (180 letters)

Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr 
           1,895,298 sequences; 629,712,918 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_683492.1|  expressed protein [Arabidopsis thaliana]        108   3e-23
gb|AAM98162.1|  unknown protein [Arabidopsis thaliana]|gi|48...   108   3e-23
emb|CAG10790.1|  unnamed protein product [Tetraodon nigrovir...    33   1.6  
ref|NP_440341.1|  glucose dehydrogenase-B [Synechocystis sp....    31   8.0  

>ref|NP_683492.1| expressed protein [Arabidopsis thaliana]
          Length = 192

 Score =  108 bits (270), Expect = 3e-23
 Identities = 51/58 (87%), Positives = 52/58 (88%)
 Frame = -3

Query: 175 NPPSQIVINXEDGDRPVVNT*FRGDPKDAPKFAIKDLPGLVXDPFGGKKWDGLGFFVQ 2
           NPPSQIVIN EDGDR VVNT FRGDPKDAPKFAIKDLPGL  DPF G+KWDGLGFFVQ
Sbjct: 55  NPPSQIVINDEDGDRTVVNTRFRGDPKDAPKFAIKDLPGLEPDPFEGEKWDGLGFFVQ 112



>gb|AAM98162.1| unknown protein [Arabidopsis thaliana]|gi|48310646|gb|AAT41859.1|
           At1g73885 [Arabidopsis thaliana]
          Length = 212

 Score =  108 bits (270), Expect = 3e-23
 Identities = 51/58 (87%), Positives = 52/58 (88%)
 Frame = -3

Query: 175 NPPSQIVINXEDGDRPVVNT*FRGDPKDAPKFAIKDLPGLVXDPFGGKKWDGLGFFVQ 2
           NPPSQIVIN EDGDR VVNT FRGDPKDAPKFAIKDLPGL  DPF G+KWDGLGFFVQ
Sbjct: 87  NPPSQIVINDEDGDRTVVNTRFRGDPKDAPKFAIKDLPGLEPDPFEGEKWDGLGFFVQ 144



>emb|CAG10790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1776

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 20/48 (41%), Positives = 23/48 (47%)
 Frame = +3

Query: 15  PRPSHFXPPKGSXTSPGRSLIANFGASFGSPLNQVFTTGLSPSSXLIT 158
           PR S F  P  S TSP  SL  +    + SP     + GLSP   LIT
Sbjct: 722 PRTSLFSSPPRSSTSPLLSLQNSASPVWSSPPQSGISAGLSPQQGLIT 769



>ref|NP_440341.1| glucose dehydrogenase-B [Synechocystis sp. PCC
           6803]|gi|3025187|sp|P73001|YG08_SYNY3 Hypothetical
           protein slr1608|gi|7429317|pir||S74981 glucose
           dehydrogenase-B - Synechocystis sp. (strain PCC
           6803)|gi|1652096|dbj|BAA17021.1| glucose dehydrogenase-B
           [Synechocystis sp. PCC 6803]
          Length = 412

 Score = 30.8 bits (68), Expect = 8.0
 Identities = 18/49 (36%), Positives = 26/49 (52%), Gaps = 3/49 (6%)
 Frame = -3

Query: 163 QIVINXEDGDRPVVNT*FRGDPKDAPK---FAIKDLPGLVXDPFGGKKW 26
           +I+   +DG  P  N  FR DPK AP+   +  +++ GL  DP   K W
Sbjct: 227 KIIRINDDGTVPADNP-FRNDPKAAPEVWSYGHRNIQGLAYDPVTQKVW 274



  Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
    Posted date:  Jul 5, 2004 10:54 PM
  Number of letters in database: 629,712,918
  Number of sequences in database:  1,895,298
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 35
effective length of database: 563,377,488
effective search space used: 13521059712
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)