BLASTX 1.5.4-Paracel [2003-06-05]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CF774407.x
(278 letters)
Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
1,895,298 sequences; 629,712,918 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193130.1| adenosylhomocysteinase / S-adenosyl-L-homo... 30 0.009
gb|AAM62888.1| adenosylhomocysteinase [Arabidopsis thaliana] 30 0.024
emb|CAB09795.1| S-adenosyl-L-homocysteine hydrolase [Arabid... 30 0.040
dbj|BAA03710.1| cytokinin binding protein CBP57 [Nicotiana ... 30 0.031
gb|AAL09400.1| cytokinin binding protein [Petunia x hybrida] 29 0.24
gb|AAK92718.1| putative S-adenosyl-L-homocysteinas protein ... 28 0.23
ref|NP_189023.1| adenosylhomocysteinase, putative / S-adeno... 28 0.23
gb|AAM19782.1| AT3g23810/MYM9_15 [Arabidopsis thaliana] 28 0.23
gb|AAL16259.1| AT3g23810/MYM9_15 [Arabidopsis thaliana] 28 0.23
gb|AAO89238.1| adenosylhomocysteinase [Medicago truncatula] 28 0.23
>ref|NP_193130.1| adenosylhomocysteinase / S-adenosyl-L-homocysteine hydrolase /
AdoHcyase (SAHH) [Arabidopsis
thaliana]|gi|6174970|sp|O23255|SAHH_ARATH
Adenosylhomocysteinase (S-adenosyl-L-homocysteine
hydrolase) (AdoHcyase)|gi|7435510|pir||C71400
adenosylhomocysteinase (EC 3.3.1.1) [similarity] -
Arabidopsis thaliana|gi|2244750|emb|CAB10173.1|
adenosylhomocysteinase [Arabidopsis
thaliana]|gi|3088579|gb|AAC14714.1|
S-adenosyl-L-homocysteine hydrolase [Arabidopsis
thaliana]|gi|7268098|emb|CAB78436.1|
adenosylhomocysteinase [Arabidopsis
thaliana]|gi|11762222|gb|AAG40389.1| AT4g13940
[Arabidopsis thaliana]|gi|14596157|gb|AAK68806.1|
adenosylhomocysteinase [Arabidopsis
thaliana]|gi|15146276|gb|AAK83621.1| AT4g13940/dl3010w
[Arabidopsis thaliana]|gi|19699158|gb|AAL90945.1|
AT4g13940/dl3010w [Arabidopsis
thaliana]|gi|20148279|gb|AAM10030.1|
adenosylhomocysteinase [Arabidopsis
thaliana]|gi|27311597|gb|AAO00764.1|
adenosylhomocysteinase [Arabidopsis thaliana]
Length = 485
Score = 30.0 bits (66), Expect(2) = 0.009
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 57 IEGPYKXPHYRY 92
IEGPYK PHYRY
Sbjct: 474 IEGPYKPPHYRY 485
Score = 29.6 bits (65), Expect(2) = 0.009
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +1
Query: 1 LGARLTKLSKDXSPYV 48
LGARLTKLSKD S YV
Sbjct: 455 LGARLTKLSKDQSDYV 470
>gb|AAM62888.1| adenosylhomocysteinase [Arabidopsis thaliana]
Length = 485
Score = 30.0 bits (66), Expect(2) = 0.024
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 57 IEGPYKXPHYRY 92
IEGPYK PHYRY
Sbjct: 474 IEGPYKPPHYRY 485
Score = 28.1 bits (61), Expect(2) = 0.024
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1
Query: 1 LGARLTKLSKDXSPYV 48
LGARLTKLSKD YV
Sbjct: 455 LGARLTKLSKDQXDYV 470
>emb|CAB09795.1| S-adenosyl-L-homocysteine hydrolase [Arabidopsis thaliana]
Length = 467
Score = 30.0 bits (66), Expect(2) = 0.040
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +3
Query: 57 IEGPYKXPHYRY 92
IEGPYK PHYRY
Sbjct: 456 IEGPYKPPHYRY 467
Score = 27.3 bits (59), Expect(2) = 0.040
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +1
Query: 1 LGARLTKLSKDXSPYV 48
LGARL KLSKD S YV
Sbjct: 437 LGARLRKLSKDQSDYV 452
>dbj|BAA03710.1| cytokinin binding protein CBP57 [Nicotiana sylvestris]
Length = 450
Score = 29.6 bits (65), Expect(2) = 0.031
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 57 IEGPYKXPHYRY 92
+EGPYK PHYRY
Sbjct: 439 VEGPYKPPHYRY 450
Score = 28.1 bits (61), Expect(2) = 0.031
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 1 LGARLTKLSKDXSPYV 48
LGARLTKLSKD + Y+
Sbjct: 420 LGARLTKLSKDQADYI 435
>gb|AAL09400.1| cytokinin binding protein [Petunia x hybrida]
Length = 431
Score = 29.3 bits (64), Expect(2) = 0.24
Identities = 13/17 (76%), Positives = 14/17 (81%)
Frame = +1
Query: 1 LGARLTKLSKDXSPYVR 51
LGARLTKL KD S Y+R
Sbjct: 401 LGARLTKLRKDQSDYIR 417
Score = 25.4 bits (54), Expect(2) = 0.24
Identities = 8/12 (66%), Positives = 10/12 (82%)
Frame = +3
Query: 57 IEGPYKXPHYRY 92
++GPYK HYRY
Sbjct: 420 VQGPYKPAHYRY 431
>gb|AAK92718.1| putative S-adenosyl-L-homocysteinas protein [Arabidopsis thaliana]
Length = 485
Score = 28.5 bits (62), Expect(2) = 0.23
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 1 LGARLTKLSKDXSPYV 48
LGARLTKL+KD S YV
Sbjct: 455 LGARLTKLTKDQSDYV 470
Score = 26.2 bits (56), Expect(2) = 0.23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 57 IEGPYKXPHYRY 92
+EGPYK HYRY
Sbjct: 474 VEGPYKPVHYRY 485
>ref|NP_189023.1| adenosylhomocysteinase, putative / S-adenosyl-L-homocysteine
hydrolase, putative / AdoHcyase, putative [Arabidopsis
thaliana]|gi|9293955|dbj|BAB01858.1| S-adenosyl
L-homocystein hydrolase [Arabidopsis
thaliana]|gi|16649037|gb|AAL24370.1| S-adenosyl
L-homocystein hydrolase [Arabidopsis
thaliana]|gi|20260074|gb|AAM13384.1| S-adenosyl
L-homocystein hydrolase [Arabidopsis
thaliana]|gi|23297630|gb|AAN12996.1| putative
S-adenosyl-L-homocysteinase [Arabidopsis thaliana]
Length = 485
Score = 28.5 bits (62), Expect(2) = 0.23
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 1 LGARLTKLSKDXSPYV 48
LGARLTKL+KD S YV
Sbjct: 455 LGARLTKLTKDQSDYV 470
Score = 26.2 bits (56), Expect(2) = 0.23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 57 IEGPYKXPHYRY 92
+EGPYK HYRY
Sbjct: 474 VEGPYKPVHYRY 485
>gb|AAM19782.1| AT3g23810/MYM9_15 [Arabidopsis thaliana]
Length = 485
Score = 28.5 bits (62), Expect(2) = 0.23
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 1 LGARLTKLSKDXSPYV 48
LGARLTKL+KD S YV
Sbjct: 455 LGARLTKLTKDQSDYV 470
Score = 26.2 bits (56), Expect(2) = 0.23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 57 IEGPYKXPHYRY 92
+EGPYK HYRY
Sbjct: 474 VEGPYKPVHYRY 485
>gb|AAL16259.1| AT3g23810/MYM9_15 [Arabidopsis thaliana]
Length = 485
Score = 28.5 bits (62), Expect(2) = 0.23
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 1 LGARLTKLSKDXSPYV 48
LGARLTKL+KD S YV
Sbjct: 455 LGARLTKLTKDQSDYV 470
Score = 26.2 bits (56), Expect(2) = 0.23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 57 IEGPYKXPHYRY 92
+EGPYK HYRY
Sbjct: 474 VEGPYKPVHYRY 485
>gb|AAO89238.1| adenosylhomocysteinase [Medicago truncatula]
Length = 485
Score = 28.1 bits (61), Expect(2) = 0.23
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1
Query: 1 LGARLTKLSKDXSPYV 48
LGARLTKLSKD + Y+
Sbjct: 455 LGARLTKLSKDQADYI 470
Score = 26.6 bits (57), Expect(2) = 0.23
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3
Query: 57 IEGPYKXPHYRY 92
+EGPYK HYRY
Sbjct: 474 VEGPYKPAHYRY 485
Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
Posted date: Jul 5, 2004 10:54 PM
Number of letters in database: 629,712,918
Number of sequences in database: 1,895,298
Lambda K H
0.316 0.131 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 68
effective length of database: 500,832,654
effective search space used: 12019983696
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)