BLASTN 2.2.3 [Apr-24-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= CF774362.x
         (254 letters)

Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa 
           29,161 sequences; 44,058,232 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g54390.1  68418.m06773 inositol monophosphatase family pr...   504   e-142
At1g67120.1  68414.m07636 midasin-related similar to Midasin...    42   0.002
At5g53800.1  68418.m06685 expressed protein                        40   0.009
At5g67530.1  68418.m08515 peptidyl-prolyl cis-trans isomeras...    38   0.034
At3g01390.2  68416.m00062 vacuolar ATP synthase subunit G 1 ...    38   0.034

>At5g54390.1 68418.m06773 inositol monophosphatase family protein similar to
           SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC
           3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile
           PF00459: Inositol monophosphatase family; supporting
           cDNA gi|1354509|gb|U55205.1|ATU55205
          Length = 1588

 Score =  504 bits (254), Expect = e-142
 Identities = 254/254 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaccaaaatcagcgacggtgacaggggaatcatcgtctttagacttaacgtgaccaccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 acaccaaaatcagcgacggtgacaggggaatcatcgtctttagacttaacgtgaccaccg 240

                                                                       
Query: 61  ttaggaagatgaagcttctcttgaactttaacacagagagaagaagcgaggtggacaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ttaggaagatgaagcttctcttgaactttaacacagagagaagaagcgaggtggacaaca 180

                                                                       
Query: 121 cgcaccgccgtgtcaatctccgtttctaaggagtccaccgccatcgccggcgaaatctat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 cgcaccgccgtgtcaatctccgtttctaaggagtccaccgccatcgccggcgaaatctat 120

                                                                       
Query: 181 cggaggagaaaggaagaggaagagaaagagatatcaaaaagcttcacgctttttattcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 cggaggagaaaggaagaggaagagaaagagatatcaaaaagcttcacgctttttattcac 60

                         
Query: 241 atgctctctctcca 254
           ||||||||||||||
Sbjct: 59  atgctctctctcca 46



>At1g67120.1 68414.m07636 midasin-related similar to Midasin (MIDAS-containing
             protein) (Swiss-Prot:Q12019) [Saccharomyces cerevisiae];
             similar to Midasin (MIDAS-containing protein)
             (Swiss-Prot:Q9NU22) [Homo sapiens]; contains Prosite
             PS00017: ATP/GTP-binding site motif A (P-loop)
          Length = 16171

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 190   aaggaagaggaagagaaagag 210
             |||||||||||||||||||||
Sbjct: 13555 aaggaagaggaagagaaagag 13575



>At5g53800.1 68418.m06685 expressed protein
          Length = 1277

 Score = 40.1 bits (20), Expect = 0.009
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 192 ggaagaggaagagaaagaga 211
           ||||||||||||||||||||
Sbjct: 465 ggaagaggaagagaaagaga 484




 Score = 36.2 bits (18), Expect = 0.13
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 191 aggaagaggaagagaaag 208
           ||||||||||||||||||
Sbjct: 442 aggaagaggaagagaaag 459



>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyclophilin-type
            family protein contains Pfam domain, PF00160:
            peptidyl-prolyl cis-trans isomerase, cyclophilin-type
          Length = 2962

 Score = 38.2 bits (19), Expect = 0.034
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 193  gaagaggaagagaaagaga 211
            |||||||||||||||||||
Sbjct: 1594 gaagaggaagagaaagaga 1612



>At3g01390.2 68416.m00062 vacuolar ATP synthase subunit G 1 (VATG1) / V-ATPase G
           subunit 1 (VAG1) / vacuolar proton pump G subunit 1
           (VMA10) identical to SWISS-PROT:O82628 vacuolar ATP
           synthase subunit G 1 (V-ATPase G subunit 1, Vacuolar
           proton pump G subunit 1) [Arabidopsis thaliana]
          Length = 834

 Score = 38.2 bits (19), Expect = 0.034
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 190 aaggaagaggaagagaaagagat 212
           |||||||||| ||||||||||||
Sbjct: 355 aaggaagaggcagagaaagagat 377



  Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
    Posted date:  Jun 25, 2004 12:58 PM
  Number of letters in database: 44,058,232
  Number of sequences in database:  29,161
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,915
Number of Sequences: 29161
Number of extensions: 15915
Number of successful extensions: 1799
Number of sequences better than 10.0: 187
length of query: 254
length of database: 44,058,232
effective HSP length: 16
effective length of query: 238
effective length of database: 43,591,656
effective search space: 10374814128
effective search space used: 10374814128
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)