BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BX839900.f
(938 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g20950.4 68415.m02474 expressed protein 1822 0.0
At2g20950.3 68415.m02473 expressed protein 1233 0.0
At2g20950.2 68415.m02472 expressed protein 1233 0.0
At2g20950.1 68415.m02471 expressed protein 1233 0.0
At4g38550.1 68417.m05458 expressed protein 149 5e-35
>At2g20950.4 68415.m02474 expressed protein
Length = 2260
Score = 1822 bits (919), Expect = 0.0
Identities = 928/931 (99%)
Strand = Plus / Minus
Query: 1 cgccaactccgtcactctctctctacattccttcgtttccttctctctccgccgcagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 cgccaactccgtcactctctctctacattccttcgtttccttctctctccgccgcagctc 1509
Query: 61 ctccctcatctcctccatctcttttttccccgccgtcatttccctatcgcactcctccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 ctccctcatctcctccatctcttttttccccgccgtcatttccctatcgcactcctccct 1449
Query: 121 cacaatcttcgccgtgtcgtacttcccgtagtactccaccgcctccgctagctccgtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 cacaatcttcgccgtgtcgtacttcccgtagtactccaccgcctccgctagctccgtcac 1389
Query: 181 cgctgttttgagccacgatacatcgattttcaccgaatccatgtccttcacgaccgccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 cgctgttttgagccacgatacatcgattttcaccgaatccatgtccttcacgaccgccgc 1329
Query: 241 gatttccgccactcgcgtcttcgtcagatctctcaacgccgttgatttcagttccattac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 gatttccgccactcgcgtcttcgtcagatctctcaacgccgttgatttcagttccattac 1269
Query: 301 tgctgcggctagggattcgagataaaacgacctcgttgaggtagattgtaacttcgacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 tgctgcggctagggattcgagataaaacgacctcgttgaggtagattgtaacttcgacga 1209
Query: 361 ggcggcgatgtcaccgtgtttgtcaatgatcgcttcgagcgtggcggcgatgctcatccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 ggcggcgatgtcaccgtgtttgtcaatgatcgcttcgagcgtggcggcgatgctcatccg 1149
Query: 421 taccttgtaattggcgacggagacgtaagtctcggatatcgctaattgtatctcttcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 taccttgtaattggcgacggagacgtaagtctcggatatcgctaattgtatctcttcctt 1089
Query: 481 tccgtagctttgaagtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 tccgtagctttgaagtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactc 1029
Query: 541 gtccggcagctccggcggctcgaattgcctctcctgctcgtaagtctctaccgatgtgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 gtccggcagctccggcggctcgaattgcctctcctgctcgtaagtctctaccgatgtgat 969
Query: 601 ctgatacttgtagtgaaccggctgcacaaaccaaagcaatttgaatttaagcattttctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 ctgatacttgtagtgaaccggctgcacaaaccaaagcaatttgaatttaagcattttctt 909
Query: 661 cacactttggtaaatagagacccgcgagagaaaaaaacgaaccgtgctgcttcctgaaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 cacactttggtaaatagagacccgcgagagaaaaaaacgaaccgtgctgcttcctgaaac 849
Query: 721 tcccctggaacgacgtccagtggcaatttctggaaagagataggtggaattgttgtcgtc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 tcccctggaacgacgtccagtggcaatttctggaaagagataggtggaattgttgtcgtc 789
Query: 781 ttcgtcgtcactggatgagtagaacggcggtggtggagagtagcttgtgtgttgatgaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 ttcgtcgtcactggatgagtagaacggcggtggtggagagtagcttgtgtgttgatgaac 729
Query: 841 aggactcatgggaggtctgttacgcggtgtgatatcggtatctgcctcgtacatcccctc 900
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 728 aggactcatgggagggctgttacgcggtgtgatatcggcatctgcctcgtacatcccctc 669
Query: 901 gaaattatcttttccgttgttgtatctctga 931
||||| |||||||||||||||||||||||||
Sbjct: 668 gaaatgatcttttccgttgttgtatctctga 638
>At2g20950.3 68415.m02473 expressed protein
Length = 2185
Score = 1233 bits (622), Expect = 0.0
Identities = 622/622 (100%)
Strand = Plus / Minus
Query: 1 cgccaactccgtcactctctctctacattccttcgtttccttctctctccgccgcagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1493 cgccaactccgtcactctctctctacattccttcgtttccttctctctccgccgcagctc 1434
Query: 61 ctccctcatctcctccatctcttttttccccgccgtcatttccctatcgcactcctccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1433 ctccctcatctcctccatctcttttttccccgccgtcatttccctatcgcactcctccct 1374
Query: 121 cacaatcttcgccgtgtcgtacttcccgtagtactccaccgcctccgctagctccgtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1373 cacaatcttcgccgtgtcgtacttcccgtagtactccaccgcctccgctagctccgtcac 1314
Query: 181 cgctgttttgagccacgatacatcgattttcaccgaatccatgtccttcacgaccgccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1313 cgctgttttgagccacgatacatcgattttcaccgaatccatgtccttcacgaccgccgc 1254
Query: 241 gatttccgccactcgcgtcttcgtcagatctctcaacgccgttgatttcagttccattac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1253 gatttccgccactcgcgtcttcgtcagatctctcaacgccgttgatttcagttccattac 1194
Query: 301 tgctgcggctagggattcgagataaaacgacctcgttgaggtagattgtaacttcgacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 tgctgcggctagggattcgagataaaacgacctcgttgaggtagattgtaacttcgacga 1134
Query: 361 ggcggcgatgtcaccgtgtttgtcaatgatcgcttcgagcgtggcggcgatgctcatccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 ggcggcgatgtcaccgtgtttgtcaatgatcgcttcgagcgtggcggcgatgctcatccg 1074
Query: 421 taccttgtaattggcgacggagacgtaagtctcggatatcgctaattgtatctcttcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 taccttgtaattggcgacggagacgtaagtctcggatatcgctaattgtatctcttcctt 1014
Query: 481 tccgtagctttgaagtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 tccgtagctttgaagtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactc 954
Query: 541 gtccggcagctccggcggctcgaattgcctctcctgctcgtaagtctctaccgatgtgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 gtccggcagctccggcggctcgaattgcctctcctgctcgtaagtctctaccgatgtgat 894
Query: 601 ctgatacttgtagtgaaccggc 622
||||||||||||||||||||||
Sbjct: 893 ctgatacttgtagtgaaccggc 872
Score = 436 bits (220), Expect = e-121
Identities = 232/236 (98%)
Strand = Plus / Minus
Query: 703 cgtgctgcttcctgaaactcccctggaacgacgtccagtggcaatttctggaaagagata 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 cgtgctgcttcctgaaactcccctggaacgacgtccagtggcaatttctggaaagagata 813
Query: 763 ggtggaattgttgtcgtcttcgtcgtcactggatgagtagaacggcggtggtggagagta 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ggtggaattgttgtcgtcttcgtcgtcactggatgagtagaacggcggtggtggagagta 753
Query: 823 gcttgtgtgttgatgaacaggactcatgggaggtctgttacgcggtgtgatatcggtatc 882
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 752 gcttgtgtgttgatgaacaggactcatgggagggctgttacgcggtgtgatatcggcatc 693
Query: 883 tgcctcgtacatcccctcgaaattatcttttccgttgttgtatctctgactctgca 938
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 692 tgcctcgtacatcccctcgaaatgatcttttccgttgttgtatctctgagtctgca 637
>At2g20950.2 68415.m02472 expressed protein
Length = 2179
Score = 1233 bits (622), Expect = 0.0
Identities = 622/622 (100%)
Strand = Plus / Minus
Query: 1 cgccaactccgtcactctctctctacattccttcgtttccttctctctccgccgcagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1487 cgccaactccgtcactctctctctacattccttcgtttccttctctctccgccgcagctc 1428
Query: 61 ctccctcatctcctccatctcttttttccccgccgtcatttccctatcgcactcctccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1427 ctccctcatctcctccatctcttttttccccgccgtcatttccctatcgcactcctccct 1368
Query: 121 cacaatcttcgccgtgtcgtacttcccgtagtactccaccgcctccgctagctccgtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1367 cacaatcttcgccgtgtcgtacttcccgtagtactccaccgcctccgctagctccgtcac 1308
Query: 181 cgctgttttgagccacgatacatcgattttcaccgaatccatgtccttcacgaccgccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1307 cgctgttttgagccacgatacatcgattttcaccgaatccatgtccttcacgaccgccgc 1248
Query: 241 gatttccgccactcgcgtcttcgtcagatctctcaacgccgttgatttcagttccattac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 gatttccgccactcgcgtcttcgtcagatctctcaacgccgttgatttcagttccattac 1188
Query: 301 tgctgcggctagggattcgagataaaacgacctcgttgaggtagattgtaacttcgacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1187 tgctgcggctagggattcgagataaaacgacctcgttgaggtagattgtaacttcgacga 1128
Query: 361 ggcggcgatgtcaccgtgtttgtcaatgatcgcttcgagcgtggcggcgatgctcatccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 ggcggcgatgtcaccgtgtttgtcaatgatcgcttcgagcgtggcggcgatgctcatccg 1068
Query: 421 taccttgtaattggcgacggagacgtaagtctcggatatcgctaattgtatctcttcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 taccttgtaattggcgacggagacgtaagtctcggatatcgctaattgtatctcttcctt 1008
Query: 481 tccgtagctttgaagtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 tccgtagctttgaagtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactc 948
Query: 541 gtccggcagctccggcggctcgaattgcctctcctgctcgtaagtctctaccgatgtgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 gtccggcagctccggcggctcgaattgcctctcctgctcgtaagtctctaccgatgtgat 888
Query: 601 ctgatacttgtagtgaaccggc 622
||||||||||||||||||||||
Sbjct: 887 ctgatacttgtagtgaaccggc 866
Score = 430 bits (217), Expect = e-120
Identities = 226/229 (98%)
Strand = Plus / Minus
Query: 703 cgtgctgcttcctgaaactcccctggaacgacgtccagtggcaatttctggaaagagata 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 cgtgctgcttcctgaaactcccctggaacgacgtccagtggcaatttctggaaagagata 807
Query: 763 ggtggaattgttgtcgtcttcgtcgtcactggatgagtagaacggcggtggtggagagta 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ggtggaattgttgtcgtcttcgtcgtcactggatgagtagaacggcggtggtggagagta 747
Query: 823 gcttgtgtgttgatgaacaggactcatgggaggtctgttacgcggtgtgatatcggtatc 882
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 746 gcttgtgtgttgatgaacaggactcatgggagggctgttacgcggtgtgatatcggcatc 687
Query: 883 tgcctcgtacatcccctcgaaattatcttttccgttgttgtatctctga 931
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 686 tgcctcgtacatcccctcgaaatgatcttttccgttgttgtatctctga 638
>At2g20950.1 68415.m02471 expressed protein
Length = 2230
Score = 1233 bits (622), Expect = 0.0
Identities = 622/622 (100%)
Strand = Plus / Minus
Query: 1 cgccaactccgtcactctctctctacattccttcgtttccttctctctccgccgcagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1538 cgccaactccgtcactctctctctacattccttcgtttccttctctctccgccgcagctc 1479
Query: 61 ctccctcatctcctccatctcttttttccccgccgtcatttccctatcgcactcctccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1478 ctccctcatctcctccatctcttttttccccgccgtcatttccctatcgcactcctccct 1419
Query: 121 cacaatcttcgccgtgtcgtacttcccgtagtactccaccgcctccgctagctccgtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1418 cacaatcttcgccgtgtcgtacttcccgtagtactccaccgcctccgctagctccgtcac 1359
Query: 181 cgctgttttgagccacgatacatcgattttcaccgaatccatgtccttcacgaccgccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 cgctgttttgagccacgatacatcgattttcaccgaatccatgtccttcacgaccgccgc 1299
Query: 241 gatttccgccactcgcgtcttcgtcagatctctcaacgccgttgatttcagttccattac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 gatttccgccactcgcgtcttcgtcagatctctcaacgccgttgatttcagttccattac 1239
Query: 301 tgctgcggctagggattcgagataaaacgacctcgttgaggtagattgtaacttcgacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 tgctgcggctagggattcgagataaaacgacctcgttgaggtagattgtaacttcgacga 1179
Query: 361 ggcggcgatgtcaccgtgtttgtcaatgatcgcttcgagcgtggcggcgatgctcatccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 ggcggcgatgtcaccgtgtttgtcaatgatcgcttcgagcgtggcggcgatgctcatccg 1119
Query: 421 taccttgtaattggcgacggagacgtaagtctcggatatcgctaattgtatctcttcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 taccttgtaattggcgacggagacgtaagtctcggatatcgctaattgtatctcttcctt 1059
Query: 481 tccgtagctttgaagtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 tccgtagctttgaagtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactc 999
Query: 541 gtccggcagctccggcggctcgaattgcctctcctgctcgtaagtctctaccgatgtgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 gtccggcagctccggcggctcgaattgcctctcctgctcgtaagtctctaccgatgtgat 939
Query: 601 ctgatacttgtagtgaaccggc 622
||||||||||||||||||||||
Sbjct: 938 ctgatacttgtagtgaaccggc 917
Score = 430 bits (217), Expect = e-120
Identities = 226/229 (98%)
Strand = Plus / Minus
Query: 703 cgtgctgcttcctgaaactcccctggaacgacgtccagtggcaatttctggaaagagata 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 cgtgctgcttcctgaaactcccctggaacgacgtccagtggcaatttctggaaagagata 858
Query: 763 ggtggaattgttgtcgtcttcgtcgtcactggatgagtagaacggcggtggtggagagta 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 ggtggaattgttgtcgtcttcgtcgtcactggatgagtagaacggcggtggtggagagta 798
Query: 823 gcttgtgtgttgatgaacaggactcatgggaggtctgttacgcggtgtgatatcggtatc 882
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 797 gcttgtgtgttgatgaacaggactcatgggagggctgttacgcggtgtgatatcggcatc 738
Query: 883 tgcctcgtacatcccctcgaaattatcttttccgttgttgtatctctga 931
||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 737 tgcctcgtacatcccctcgaaatgatcttttccgttgttgtatctctga 689
>At4g38550.1 68417.m05458 expressed protein
Length = 2227
Score = 149 bits (75), Expect = 5e-35
Identities = 219/267 (82%)
Strand = Plus / Minus
Query: 127 cttcgccgtgtcgtacttcccgtagtactccaccgcctccgctagctccgtcaccgctgt 186
||||||||||||||||| |||| | ||||||||||||||||| || ||||| ||||||||
Sbjct: 1736 cttcgccgtgtcgtactgcccgaaatactccaccgcctccgccagttccgttaccgctgt 1677
Query: 187 tttgagccacgatacatcgattttcaccgaatccatgtccttcacgaccgccgcgatttc 246
|| |||||||| || | |||||||||||| |||||||| ||||| ||||||||||| ||
Sbjct: 1676 ctttagccacgacacgttgattttcaccgactccatgtctttcaccaccgccgcgatctc 1617
Query: 247 cgccactcgcgtcttcgtcagatctctcaacgccgttgatttcagttccattactgctgc 306
|||||| ||||| ||||||| ||| |||| |||| |||||| ||||| || | ||
Sbjct: 1616 cgccacgcgcgttttcgtcaaatccctcagaaccgtctttttcagctccatcaccacagc 1557
Query: 307 ggctagggattcgagataaaacgacctcgttgaggtagattgtaacttcgacgaggcggc 366
|||||||||||| || ||| | |||| |||| | | ||| | |||||| ||||| ||
Sbjct: 1556 ggctagggattccaggtaataagaccgagttgccattgcttgcagcttcgaggaggctgc 1497
Query: 367 gatgtcaccgtgtttgtcaatgatcgc 393
|||||| ||||| ||||| ||||||||
Sbjct: 1496 gatgtcgccgtgcttgtcgatgatcgc 1470
Score = 85.7 bits (43), Expect = 6e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 494 agtccgcgcattctggcgatctcctgcatcgtgaagctctgtgactcgtccggcagctcc 553
||||| |||||| ||| ||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 1363 agtcctcgcattttggtaatctcctgcattgtgaagctttgtgactcgtcaggcagctcc 1304
Query: 554 ggcggctcgaa 564
|||||||||||
Sbjct: 1303 ggcggctcgaa 1293
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,250
Number of Sequences: 29161
Number of extensions: 26250
Number of successful extensions: 665
Number of sequences better than 10.0: 54
length of query: 938
length of database: 44,058,232
effective HSP length: 18
effective length of query: 920
effective length of database: 43,533,334
effective search space: 40050667280
effective search space used: 40050667280
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)