BLASTX 1.5.4-Paracel [2003-06-05]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= CF652752.f
         (1516 letters)

Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr 
           1,895,298 sequences; 629,712,918 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_996016.1|  CG33275-PA [Drosophila melanogaster]|gi|45...    35   3.5  
emb|CAC45075.1|  serine/threonine protein kinase [Leishmania...    35   4.5  
ref|NP_850008.2|  expressed protein [Arabidopsis thaliana]|g...    35   4.5  
emb|CAF94697.1|  unnamed protein product [Tetraodon nigrovir...    35   5.9  
emb|CAG05834.1|  unnamed protein product [Tetraodon nigrovir...    35   5.9  

>ref|NP_996016.1| CG33275-PA [Drosophila melanogaster]|gi|45446012|gb|AAS65060.1|
            CG33275-PA [Drosophila melanogaster]
          Length = 1876

 Score = 35.4 bits (80), Expect = 3.5
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = -1

Query: 1084 AEPPQPDKVEYGPPEGNHPXGRAPVAEATDLHRNHRGQAPSARDEEDSGLGPHE 923
            AE   P   +   P G  P G+ P  E+TD        AP ARD+ED   G  E
Sbjct: 80   AEILVPSDTQIDVPGGGIPGGQIPSLESTDRDMKEARAAPIARDDEDQEAGDPE 133



>emb|CAC45075.1| serine/threonine protein kinase [Leishmania major]
          Length = 2301

 Score = 35.0 bits (79), Expect = 4.5
 Identities = 37/128 (28%), Positives = 51/128 (38%)
 Frame = -2

Query: 1179 VGGGYEAASRERPAIPTCWCALH*RQ*TASKELSRHSLTKWSTGHQKVITXXGAHQWPRP 1000
            + GG+ AASR+ P IP            A+    R S+T  ST    V+T       P P
Sbjct: 1009 ISGGFTAASRQPPCIP------------AAPLRQRVSVTALST---TVLTST-----PTP 1048

Query: 999  PISTETTEGRPRQPEMRKTVD*DRTKGPTRGARAPVPMLQSVSTICAFPPRTRGGSVSYP 820
            P S      RP +P+M +        GP R + +  P   +     A    ++G S SYP
Sbjct: 1049 PAS------RPDKPQMAQD-----ASGPARPSPSLQPRGNADRQPTAVTAASKGASASYP 1097

Query: 819  EHMRSRDL 796
                S  L
Sbjct: 1098 RLFSSSSL 1105



>ref|NP_850008.2| expressed protein [Arabidopsis thaliana]|gi|30793903|gb|AAP40404.1|
            unknown protein [Arabidopsis
            thaliana]|gi|30794058|gb|AAP40474.1| unknown protein
            [Arabidopsis thaliana]
          Length = 520

 Score = 35.0 bits (79), Expect = 4.5
 Identities = 28/111 (25%), Positives = 40/111 (35%), Gaps = 16/111 (14%)
 Frame = -2

Query: 1083 LSRHSLTKWSTGHQKVITXXGAHQWPRPPISTETTEGRPRQPEMRKTVD*DRTKGPTRGA 904
            +S    T W    Q       +HQ  RPP+   +T  RPR+P+   T   + +  P R A
Sbjct: 58   ISDEQTTHWKPQQQASERIPNSHQ--RPPVYRYSTPERPREPDEDVTPRSNGSGSPFRSA 115

Query: 903  RAPVP----------------MLQSVSTICAFPPRTRGGSVSYPEHMRSRD 799
            R   P                M ++ + +  F P        Y  H R RD
Sbjct: 116  RTRTPDRRKRSSEITKELYERMYEADANVSPFHPFRSRSPAPYNTHERGRD 166



>emb|CAF94697.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 192

 Score = 34.7 bits (78), Expect = 5.9
 Identities = 40/139 (28%), Positives = 51/139 (35%), Gaps = 21/139 (15%)
 Frame = -2

Query: 1023 GAHQWPRPPISTETTEGR----PRQPEMRKTVD*DRTKG-----PTRGARAPVPMLQSVS 871
            GA  WPRPP     T  R    P  P    T    RT+      PT+   AP P L   +
Sbjct: 41   GAWTWPRPPRRWRPTSCRAATPPPGPCRTATTTSRRTRTAPPPPPTKTPTAPPPTLTRAT 100

Query: 870  TICAFP----------PRTRGGSVSYPEHMRSRDLV*SVAFLPQMDISARVDSCPA--WF 727
              CA P          P +RG ++  P   R            +   +AR D+  A  W+
Sbjct: 101  RTCASPPAPGVAPSPAPSSRGPALPCPSSRR------------RTARTARADAAWASRWW 148

Query: 726  DGVAPRAAARQSCGTHTCS 670
             G A R A   +C   T S
Sbjct: 149  TGAAARPA---TCSPTTAS 164



>emb|CAG05834.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 501

 Score = 34.7 bits (78), Expect = 5.9
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -3

Query: 989 PKPQRAGPVSPR*GRQWTRTARKARLEAHAPLYPCCRASVQYVPSRPVLVGDPSRILSTC 810
           P+ + AG + PR  R W             PL  CC A V Y+ ++  L+    + L TC
Sbjct: 336 PEGEGAGALVPRRSRYWLSVRVVRACVGLGPLTGCCPAGVAYLFAKAYLINKKPQYLDTC 395



  Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
    Posted date:  Jul 5, 2004 10:54 PM
  Number of letters in database: 629,712,918
  Number of sequences in database:  1,895,298
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 130
effective length of database: 383,324,178
effective search space used: 143363242572
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)