BLASTX 1.5.4-Paracel [2003-06-05]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BE039522.f
(1438 letters)
Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
1,895,298 sequences; 629,712,918 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAF92970.1| unnamed protein product [Tetraodon nigrovir... 39 0.29
ref|NP_592924.1| hypothetical 65.9 kd protein. [Schizosacch... 39 0.29
gb|AAQ72829.1| CD45 [Ictalurus punctatus] 39 0.38
gb|AAF61746.1| fruitless [Drosophila mimica] 37 1.1
ref|XP_215127.2| similar to secreted gel-forming mucin [Rat... 37 1.1
gb|AAF82296.1| putative transcription factor FRUITLESS [Dro... 37 1.1
ref|XP_405236.1| hypothetical protein AN1099.2 [Aspergillus... 36 1.9
ref|XP_129595.2| similar to Ifi204 protein [Mus musculus] 36 2.5
dbj|BAC87330.1| unnamed protein product [Homo sapiens] 35 3.2
ref|XP_291816.4| otogelin [Homo sapiens] 35 3.2
>emb|CAF92970.1| unnamed protein product [Tetraodon nigroviridis]
Length = 867
Score = 38.9 bits (89), Expect = 0.29
Identities = 32/89 (35%), Positives = 41/89 (45%), Gaps = 1/89 (1%)
Frame = -2
Query: 921 PPANAVGTPQTYSVADPTA-AHRHPRSSATTSDSPGVTRTVRRAGTPEXATLRRPDHRVR 745
PP +VG TYSV+ A + R PR +A+ S G RR AT P
Sbjct: 646 PPQRSVGGASTYSVSSAAASSERFPRGTASRSTFHGGQLRERR-----TATYNGPP--AS 698
Query: 744 PRLAYRDPGALTSMRTRVRLRTYSNCTSR 658
P L++ DP AL+ R R +S TSR
Sbjct: 699 PSLSH-DPAALSQSRARGSTNLFSKLTSR 726
>ref|NP_592924.1| hypothetical 65.9 kd protein. [Schizosaccharomyces
pombe]|gi|1175406|sp|Q09729|YA4C_SCHPO Hypothetical
protein C31A2.12 in chromosome I|gi|2130423|pir||S58106
hypothetical 65.9 kd protein - fission yeast
(Schizosaccharomyces pombe)|gi|914890|emb|CAA90470.1|
SPAC31A2.12 [Schizosaccharomyces pombe]
Length = 596
Score = 38.9 bits (89), Expect = 0.29
Identities = 25/95 (26%), Positives = 43/95 (44%), Gaps = 6/95 (6%)
Frame = -3
Query: 1202 TYATARYDRVYINMRYTLTPTTFDNTAYNVTRLPRSSASLPPTARTTSSSLRHILIPLRT 1023
+Y + YDR+Y + Y+ T + A PR S+ PT + + R ++ L
Sbjct: 346 SYQNSMYDRLYDGLSYSNLDTPLPSGATT----PRRRDSMEPTYASNEAHRRQLIAGLTE 401
Query: 1022 LIPQ------SPSTAGPATHPLASPPAYGV*GHPA 936
L Q SP+ P+ HP PP++ + +P+
Sbjct: 402 LALQQQPQGRSPNEHSPSNHPEDFPPSFSLGSNPS 436
>gb|AAQ72829.1| CD45 [Ictalurus punctatus]
Length = 287
Score = 38.5 bits (88), Expect = 0.38
Identities = 38/128 (29%), Positives = 53/128 (40%), Gaps = 1/128 (0%)
Frame = -3
Query: 1361 VSPPLAHAS*RWPRRRAHSPLRXTSHSHTAQIRPITTHRRGIHXDHTGSLTHETYATARY 1182
+SPPL ++ +P R +SHS+ +T T H+++ T
Sbjct: 76 ISPPLTTST-ATGNNDTGTPARNSSHSNITTAGAVTEMNITGFPPSTTEHQHQSHTTLNE 134
Query: 1181 DRVYINMRYTLTPT-TFDNTAYNVTRLPRSSASLPPTARTTSSSLRHILIPLRTLIPQSP 1005
Y+ T TP+ NT VT SSAS +AR TSS + I PL T
Sbjct: 135 RENYMTGLPTNTPSHQHPNTTVTVTTAENSSASTSDSAR-TSSPMNPISPPLTTSTATEN 193
Query: 1004 STAGPATH 981
TAG T+
Sbjct: 194 YTAGLPTN 201
>gb|AAF61746.1| fruitless [Drosophila mimica]
Length = 337
Score = 37.0 bits (84), Expect = 1.1
Identities = 37/153 (24%), Positives = 64/153 (41%)
Frame = -3
Query: 1376 HTRAXVSPPLAHAS*RWPRRRAHSPLRXTSHSHTAQIRPITTHRRGIHXDHTGSLTHETY 1197
+ RA + PP H P+ T +S+T + + + R I + + + +
Sbjct: 64 YRRAIIYPPPHHDEDMPPQDL------YTDNSYTCEYKCRERNMRAIRCNRQPHYSQQQH 117
Query: 1196 ATARYDRVYINMRYTLTPTTFDNTAYNVTRLPRSSASLPPTARTTSSSLRHILIPLRTLI 1017
+ + +++ + T T + ++ L + AS PT T SSS R L +
Sbjct: 118 DQSLHPQLHNHQMATAPQTALNLGRHSTETLCAAEASHSPTPTTASSSYREQQPHLSYAL 177
Query: 1016 PQSPSTAGPATHPLASPPAYGV*GHPARSPTFH 918
QSP+ + + H L +YG GH A SP H
Sbjct: 178 QQSPTQS--SIHQLELAHSYGHHGHHA-SPQHH 207
>ref|XP_215127.2| similar to secreted gel-forming mucin [Rattus norvegicus]
Length = 2806
Score = 37.0 bits (84), Expect = 1.1
Identities = 42/166 (25%), Positives = 61/166 (36%), Gaps = 32/166 (19%)
Frame = -3
Query: 1388 HSAPHTRAXVSPPLAHAS*RWPRRR-AHSPLRXTSHSHTAQIRP----ITTHRRGIHXDH 1224
HS P T A PPL S P ++P S S A P + T G H
Sbjct: 2151 HSGPQTSASTQPPLISTSAVTPTTEILNTPTGQHSVSPAATSTPPRTVLPTTLEGTRPPH 2210
Query: 1223 T----------GSLTHETYATARYDRVYINMRYTLTPT-----------------TFDNT 1125
T + T + +T R +++ +TPT T T
Sbjct: 2211 TTVPVIYTTSATTSTKGSLSTHRTSTAHLSESSAMTPTQSTSILATTNSLKPTTETASVT 2270
Query: 1124 AYNVTRLPRSSASLPPTARTTSSSLRHILIPLRTLIPQSPSTAGPA 987
A+ T +P +S S+ PT +T + + H T PQ+P T P+
Sbjct: 2271 AHGSTSMPATSNSIKPTVSSTGTPVIH-TTSATTSGPQTPRTTHPS 2315
>gb|AAF82296.1| putative transcription factor FRUITLESS [Drosophila mimica]
Length = 337
Score = 37.0 bits (84), Expect = 1.1
Identities = 37/153 (24%), Positives = 64/153 (41%)
Frame = -3
Query: 1376 HTRAXVSPPLAHAS*RWPRRRAHSPLRXTSHSHTAQIRPITTHRRGIHXDHTGSLTHETY 1197
+ RA + PP H P+ T +S+T + + + R I + + + +
Sbjct: 66 YRRAIIYPPPHHDEDMPPQDL------YTDNSYTCEYKCRERNMRAIRCNRQPHYSQQQH 119
Query: 1196 ATARYDRVYINMRYTLTPTTFDNTAYNVTRLPRSSASLPPTARTTSSSLRHILIPLRTLI 1017
+ + +++ + T T + ++ L + AS PT T SSS R L +
Sbjct: 120 DQSLHPQLHNHQMATAPQTALNLGRHSTETLCAAEASHSPTPTTASSSYREQQPHLSYAL 179
Query: 1016 PQSPSTAGPATHPLASPPAYGV*GHPARSPTFH 918
QSP+ + + H L +YG GH A SP H
Sbjct: 180 QQSPTQS--SIHQLELAHSYGHHGHHA-SPQHH 209
>ref|XP_405236.1| hypothetical protein AN1099.2 [Aspergillus nidulans FGSC
A4]|gi|40747061|gb|EAA66217.1| hypothetical protein
AN1099.2 [Aspergillus nidulans FGSC A4]
Length = 721
Score = 36.2 bits (82), Expect = 1.9
Identities = 37/151 (24%), Positives = 58/151 (37%), Gaps = 9/151 (5%)
Frame = -3
Query: 1388 HSAPHTRAXVSPPLAHAS*RWPRRRAHS---PLRXTSHSHTAQIRPITTHRRGIHXDHTG 1218
HS +R+ +P + S P R P R TS Q + + + + T
Sbjct: 420 HSGELSRSSPTPKTSMESVSSPEARPTKQAGPSRQTSKLQKQQ-QEVAQPKESLEQKETA 478
Query: 1217 SLTHETYATARY------DRVYINMRYTLTPTTFDNTAYNVTRLPRSSASLPPTARTTSS 1056
H+ T R + + + P + + N R+P S S PT+ T+ S
Sbjct: 479 LREHQRDQTIRQVVLDEVEEISGSGSSRSRPYEVEQSQSNTVRVP--SPSRKPTSPTSPS 536
Query: 1055 SLRHILIPLRTLIPQSPSTAGPATHPLASPP 963
S + P+ Q P + GP TH + SPP
Sbjct: 537 SPTSPVSPIGIANRQPPQSQGPYTHSVTSPP 567
>ref|XP_129595.2| similar to Ifi204 protein [Mus musculus]
Length = 978
Score = 35.8 bits (81), Expect = 2.5
Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 6/148 (4%)
Frame = -3
Query: 1310 HSPLRXTSHSHTAQIRPITTHRRGIHXDHTGSLTHETYATARYDRVYINMRYTLTP-TTF 1134
H+ L TS + A ++T + H S T + A + L P T
Sbjct: 632 HATLSTTSSNLLAPHATLSTTSSNLLAPHATSSTASSNLLAPQATLSTPSNSLLAPHATL 691
Query: 1133 DNTAYNV-----TRLPRSSASLPPTARTTSSSLRHILIPLRTLIPQSPSTAGPATHPLAS 969
T+ N+ T SS L P A T+S++ ++L P TL S + P P+ +
Sbjct: 692 STTSSNLLAPHATSSTASSNLLAPHA-TSSTASSNLLAPHATLPTASSNLLAPQLCPVTA 750
Query: 968 PPAYGV*GHPARSPTFHQRTRWAPRKHT 885
A P S T H W PR+ T
Sbjct: 751 SRALSA--IPVPSATVHSSPSWTPRRGT 776
>dbj|BAC87330.1| unnamed protein product [Homo sapiens]
Length = 1508
Score = 35.4 bits (80), Expect = 3.2
Identities = 29/80 (36%), Positives = 40/80 (49%), Gaps = 5/80 (6%)
Frame = -3
Query: 1094 SASLPPTAR----TTSSSLR-HILIPLRTLIPQSPSTAGPATHPLASPPAYGV*GHPARS 930
S+ PP R T + ++R H +P+RT PQ TA P++ P+ASP G +RS
Sbjct: 622 SSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPPQPSLTASPSSRPVASP------GAISRS 675
Query: 929 PTFHQRTRWAPRKHTAWLTP 870
PT + H A LTP
Sbjct: 676 PT-------SSGSHKAVLTP 688
>ref|XP_291816.4| otogelin [Homo sapiens]
Length = 1508
Score = 35.4 bits (80), Expect = 3.2
Identities = 29/80 (36%), Positives = 40/80 (49%), Gaps = 5/80 (6%)
Frame = -3
Query: 1094 SASLPPTAR----TTSSSLR-HILIPLRTLIPQSPSTAGPATHPLASPPAYGV*GHPARS 930
S+ PP R T + ++R H +P+RT PQ TA P++ P+ASP G +RS
Sbjct: 622 SSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPPQPSLTASPSSRPVASP------GAISRS 675
Query: 929 PTFHQRTRWAPRKHTAWLTP 870
PT + H A LTP
Sbjct: 676 PT-------SSGSHKAVLTP 688
Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
Posted date: Jul 5, 2004 10:54 PM
Number of letters in database: 629,712,918
Number of sequences in database: 1,895,298
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 130
effective length of database: 383,324,178
effective search space used: 133396813944
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)