BLASTX 1.5.4-Paracel [2003-06-05]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BE037825.f
(1489 letters)
Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
1,895,298 sequences; 629,712,918 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P38898|YH17_YEAST Hypothetical 17.1 kDa protein in PUR5 ... 43 0.021
dbj|BAB02319.1| transcription factor-like protein [Arabidop... 39 0.30
ref|NP_566467.2| myb family transcription factor (MYB26) [A... 39 0.30
pir||S54157 extensin-like protein - cowpea (fragment) 38 0.68
gb|EAA51059.1| predicted protein [Magnaporthe grisea 70-15] 38 0.68
gb|AAN63608.1| ligand-independent activating molecule for e... 37 1.5
ref|NP_060063.2| BMP-2 inducible kinase isoform b [Homo sap... 36 2.0
dbj|BAC11515.1| unnamed protein product [Homo sapiens] 36 2.0
pir||T46347 hypothetical protein DKFZp434K0614.1 - human (f... 36 2.0
pir||T46364 hypothetical protein DKFZp434P0116.1 - human (f... 36 2.0
>sp|P38898|YH17_YEAST Hypothetical 17.1 kDa protein in PUR5
3'region|gi|626712|pir||S48998 hypothetical protein
YHR217c - yeast (Saccharomyces
cerevisiae)|gi|551324|gb|AAB69740.1| Yhr217cp
[Saccharomyces cerevisiae]
Length = 153
Score = 42.7 bits (99), Expect = 0.021
Identities = 30/91 (32%), Positives = 34/91 (36%), Gaps = 9/91 (9%)
Frame = +3
Query: 336 HSH---HAHRLLILALPSPHPHLXYRQALPTSLCWSFLYHRSSQPTPAQSHQPTNFIS-- 500
H H H H P PHPH + PT PTP +H P +S
Sbjct: 29 HPHTPTHTHPHTPTPTPHPHPHTPHPHTTPT-------------PTPHHTHTPHTTLSNL 75
Query: 501 ----PSHLPLSPTASLTHLLPPLSRLILTST 581
PSH P SP +L H PL I ST
Sbjct: 76 SLNLPSHYPTSPLVTLPHSTIPLPTTIHLST 106
>dbj|BAB02319.1| transcription factor-like protein [Arabidopsis
thaliana]|gi|41619248|gb|AAS10058.1| MYB transcription
factor [Arabidopsis thaliana]
Length = 358
Score = 38.9 bits (89), Expect = 0.30
Identities = 40/156 (25%), Positives = 56/156 (35%), Gaps = 16/156 (10%)
Frame = +3
Query: 336 HSHHAHRLLILALPSPHPHLXYRQALPTSLCWSFLYHRSSQPTPAQSHQPT--------- 488
H HH H H HL +L T+L YH PT
Sbjct: 119 HHHHGHH---------HHHLSSMASLLTNLP----YHNGFNPTTVDDESSRFMSNIITNT 165
Query: 489 --NFISPSHLPLSPTASLTHLLPPLSR-----LILTSTSTCLHQYSTLHLSYFSTLQYQY 647
NFI+PSHL L +T L+ P SR + T+ H + H + L
Sbjct: 166 NPNFITPSHLSLPSPHVMTPLMFPTSREGDFKFLTTNNPNQSHHHDNNHYNNLDILSPTP 225
Query: 648 RSLLYXPILLSSTMSHISTHYVALIDLPHSSITPYR 755
+ LSS + + AL D P S+I+ ++
Sbjct: 226 TINNHHQPSLSSCPHDNNLQWPALPDFPASTISGFQ 261
>ref|NP_566467.2| myb family transcription factor (MYB26) [Arabidopsis
thaliana]|gi|5823327|gb|AAD53102.1| putative
transcription factor [Arabidopsis thaliana]
Length = 367
Score = 38.9 bits (89), Expect = 0.30
Identities = 40/156 (25%), Positives = 56/156 (35%), Gaps = 16/156 (10%)
Frame = +3
Query: 336 HSHHAHRLLILALPSPHPHLXYRQALPTSLCWSFLYHRSSQPTPAQSHQPT--------- 488
H HH H H HL +L T+L YH PT
Sbjct: 128 HHHHGHH---------HHHLSSMASLLTNLP----YHNGFNPTTVDDESSRFMSNIITNT 174
Query: 489 --NFISPSHLPLSPTASLTHLLPPLSR-----LILTSTSTCLHQYSTLHLSYFSTLQYQY 647
NFI+PSHL L +T L+ P SR + T+ H + H + L
Sbjct: 175 NPNFITPSHLSLPSPHVMTPLMFPTSREGDFKFLTTNNPNQSHHHDNNHYNNLDILSPTP 234
Query: 648 RSLLYXPILLSSTMSHISTHYVALIDLPHSSITPYR 755
+ LSS + + AL D P S+I+ ++
Sbjct: 235 TINNHHQPSLSSCPHDNNLQWPALPDFPASTISGFQ 270
>pir||S54157 extensin-like protein - cowpea (fragment)
Length = 279
Score = 37.7 bits (86), Expect = 0.68
Identities = 25/74 (33%), Positives = 37/74 (49%), Gaps = 8/74 (10%)
Frame = +1
Query: 1087 LLXSFTILFYSHY-----SSHISLLIYIPTSHASYHHLLPISSHYYSFSHLLP---PSTT 1242
LL ++F SH+ H+ + I H +HHLL +SH+ HLLP P T
Sbjct: 19 LLHHHLLMFTSHHLLHLLPHHLHMCISRHHHHLLHHHLLMFTSHH--LLHLLPHHLPMFT 76
Query: 1243 LIHSPLLLPSYIPL 1284
+H LLP ++P+
Sbjct: 77 SLHLLHLLPHHLPM 90
>gb|EAA51059.1| predicted protein [Magnaporthe grisea 70-15]
Length = 533
Score = 37.7 bits (86), Expect = 0.68
Identities = 39/135 (28%), Positives = 59/135 (42%), Gaps = 25/135 (18%)
Frame = +3
Query: 414 PTSLCWSFLYHRSSQPTPAQSHQP---TNFISPSHLPLS-------------------PT 527
P S+ +FL+ RS+ P P QP ++ ++P P S PT
Sbjct: 204 PPSIRRAFLHPRSASPAPGPGPQPMTKSSILTPPETPNSYRSNAFPPIVNAGDSIHRYPT 263
Query: 528 ASLTHLLP-PLSRLILTSTSTCLHQYSTLHLSYFSTLQYQYRSLLYXP--ILLSSTMSHI 698
+ L P P S STS+ + LS +T + SLLY P I SS S++
Sbjct: 264 QAPFGLPPTPTSLRSSRSTSSLQLSHQLSRLSTAATQAPRSLSLLYSPHGISTSSLSSYV 323
Query: 699 STHYVALIDLPHSSI 743
++H VA LP +++
Sbjct: 324 TSHLVAEAALPLTAL 338
>gb|AAN63608.1| ligand-independent activating molecule for estrogen receptor
[Rattus norvegicus]
Length = 242
Score = 36.6 bits (83), Expect = 1.5
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Frame = +3
Query: 339 SHHAHRLLILALPSPHPHLXYRQALPTSLCWS-------FLYHRS---SQPTPAQS-HQP 485
SHH H+ L+ +P P + TS+C S F +HR + P P + H
Sbjct: 3 SHHHHQCLLF---TPPPPVSALHTTTTSVCSSHHHQCLLFNHHRCLLFTPPPPVSALHTT 59
Query: 486 TNFISPSHLPLSPTASLTHLLPPLSRL---ILTSTSTCLHQYSTLHLSYFSTLQYQYRSL 656
T + SH L PPLS L T+TS C H +++ S+ + ++ L
Sbjct: 60 TTSVCSSH----HHHCLLFTPPPLSALHTTTTTTTSVCFHTITSVCSSH-----HHHQCL 110
Query: 657 LYXPILLS---STMSHISTHY 710
L+ P LS +T + S+H+
Sbjct: 111 LFTPPPLSALHTTTTVCSSHH 131
Score = 33.9 bits (76), Expect = 9.8
Identities = 36/129 (27%), Positives = 50/129 (37%), Gaps = 5/129 (3%)
Frame = +3
Query: 339 SHHAHRLLILALPSPHPHLXYRQALPTSLCWSFLYH--RSSQPTPAQSHQPTNFISPSHL 512
SHH H LL P L TS+C S +H + P P + T + SH
Sbjct: 129 SHHHHCLLFTP-----PPLSALHTTTTSVCSSHHHHCLLFTPPPPVSALHTTTSVCSSH- 182
Query: 513 PLSPTASLTHLLPPLSRLILTSTSTCLHQYSTLHLSYFSTLQYQYRSLLYXP---ILLSS 683
L PPLS L T+TS C + + ++ LL+ P L +
Sbjct: 183 ---HHQCLLFTPPPLSALHTTTTSVC-------------SSHHHHQCLLFTPPPVSALHT 226
Query: 684 TMSHISTHY 710
T S S+H+
Sbjct: 227 TTSVCSSHH 235
>ref|NP_060063.2| BMP-2 inducible kinase isoform b [Homo sapiens]
Length = 662
Score = 36.2 bits (82), Expect = 2.0
Identities = 32/112 (28%), Positives = 45/112 (39%), Gaps = 13/112 (11%)
Frame = +3
Query: 333 YHSHHAHRLLILALPSPHPHLXYRQALPTSLCWSFLYHRSSQPTPAQSHQPTNF------ 494
+H HH H LL A + H +Q + L FL H QP P+ S PT
Sbjct: 487 HHHHHHHHLLQDAYMQQYQHATQQQQM---LQQQFLMHSVYQPQPSASQYPTMMPQYQQA 543
Query: 495 -----ISPSHLPLSPTASLTHLLPP--LSRLILTSTSTCLHQYSTLHLSYFS 629
+ H P AS +L P S +++ TS+ Q T+ S +S
Sbjct: 544 FFQQQMLAQHQPSQQQASPEYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYS 595
>dbj|BAC11515.1| unnamed protein product [Homo sapiens]
Length = 429
Score = 36.2 bits (82), Expect = 2.0
Identities = 32/112 (28%), Positives = 45/112 (39%), Gaps = 13/112 (11%)
Frame = +3
Query: 333 YHSHHAHRLLILALPSPHPHLXYRQALPTSLCWSFLYHRSSQPTPAQSHQPTNF------ 494
+H HH H LL A + H +Q + L FL H QP P+ S PT
Sbjct: 254 HHHHHHHHLLQDAYMQQYQHATQQQQM---LQQQFLMHSVYQPQPSASQYPTMMPQYQQA 310
Query: 495 -----ISPSHLPLSPTASLTHLLPP--LSRLILTSTSTCLHQYSTLHLSYFS 629
+ H P AS +L P S +++ TS+ Q T+ S +S
Sbjct: 311 FFQQQMLAQHQPSQQQASPEYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYS 362
>pir||T46347 hypothetical protein DKFZp434K0614.1 - human
(fragment)|gi|6807726|emb|CAB70673.1| hypothetical
protein [Homo sapiens]
Length = 853
Score = 36.2 bits (82), Expect = 2.0
Identities = 32/112 (28%), Positives = 45/112 (39%), Gaps = 13/112 (11%)
Frame = +3
Query: 333 YHSHHAHRLLILALPSPHPHLXYRQALPTSLCWSFLYHRSSQPTPAQSHQPTNF------ 494
+H HH H LL A + H +Q + L FL H QP P+ S PT
Sbjct: 179 HHHHHHHHLLQDAYMQQYQHATQQQQM---LQQQFLMHSVYQPQPSASQYPTMMPQYQQA 235
Query: 495 -----ISPSHLPLSPTASLTHLLPP--LSRLILTSTSTCLHQYSTLHLSYFS 629
+ H P AS +L P S +++ TS+ Q T+ S +S
Sbjct: 236 FFQQQMLAQHQPSQQQASPEYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYS 287
>pir||T46364 hypothetical protein DKFZp434P0116.1 - human
(fragments)|gi|6807781|emb|CAB70863.1| hypothetical
protein [Homo sapiens]
Length = 661
Score = 36.2 bits (82), Expect = 2.0
Identities = 32/112 (28%), Positives = 45/112 (39%), Gaps = 13/112 (11%)
Frame = +3
Query: 333 YHSHHAHRLLILALPSPHPHLXYRQALPTSLCWSFLYHRSSQPTPAQSHQPTNF------ 494
+H HH H LL A + H +Q + L FL H QP P+ S PT
Sbjct: 486 HHHHHHHHLLQDAYMQQYQHATQQQQM---LQQQFLMHSVYQPQPSASQYPTMMPQYQQA 542
Query: 495 -----ISPSHLPLSPTASLTHLLPP--LSRLILTSTSTCLHQYSTLHLSYFS 629
+ H P AS +L P S +++ TS+ Q T+ S +S
Sbjct: 543 FFQQQMLAQHQPSQQQASPEYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYS 594
Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
Posted date: Jul 5, 2004 10:54 PM
Number of letters in database: 629,712,918
Number of sequences in database: 1,895,298
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 130
effective length of database: 383,324,178
effective search space used: 139913324970
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)