BLASTN 2.2.3 [Apr-24-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 10836.F
         (562 letters)

Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa 
           29,161 sequences; 44,058,232 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g21655.1  68415.m02576 expressed protein contains Pfam PF...  1098   0.0  
At5g47980.1  68418.m05927 transferase family protein similar...    40   0.020
At5g03040.1  68418.m00252 calmodulin-binding family protein ...    40   0.020
At3g55920.1  68416.m06214 peptidyl-prolyl cis-trans isomeras...    38   0.077
At3g55910.1  68416.m06213 expressed protein PA26, p53 regula...    38   0.077
>At2g21655.1 68415.m02576 expressed protein contains Pfam PF05617: Arabidopsis
           thaliana protein of unknown function (DUF784)
          Length = 562

 Score = 1098 bits (554), Expect = 0.0
 Identities = 560/562 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaaacaaagaaaatcaattaagaataaaatatcaaaatattttaaaatggagaataaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaaaacaaagaaaatcaattaagaataaaatatcaaaatattttaaaatggagaataaaa 60

                                                                       
Query: 61  caatgtttatgatattttctttgatcatggttttgctatcgttttctcatccaactttcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  caatgtttatgatattttctttgatcatggttttgctatcgttttctcatccaactttcg 120

                                                                       
Query: 121 gcaaagaaagcgataatgacaagccactcctcatttcagacgacgagtttgatgctatga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaaagaaagcgataatgacaagccactcctcatttcagacgacgagtttgatgctatga 180

                                                                       
Query: 181 tggcaagatctcctacatcggacaattataacgaaaatgttggtagtaaatattcaaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggcaagatctcctacatcggacaattataacgaaaatgttggtagtaaatattcaaaga 240

                                                                       
Query: 241 aacaaataaattatcttatgaactgcagtaaaaagatggccgtcccagataaatgtatag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacaaataaattatcttatgaactgcagtaaaaagatggccgtcccagataaatgtatag 300

                                                                       
Query: 301 aagaagtgatggctgaaattattcagaacaaaagtgcttcaagatattgttgtttgggga 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 301 aagaagtgatggctgaaattattcagaacaaaagtgcttcaagagattgttgtttgggga 360

                                                                       
Query: 361 tagtgaaagctggaaaggaatgtcacatggaatatatgaaattattttttcaaatgtatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagtgaaagctggaaaggaatgtcacatggaatatatgaaattattttttcaaatgtatg 420

                                                                       
Query: 421 aactcaggcgttttacttctaaaaggttttccaaaactaatgagatatggaacagatgtt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aactcaggcgttttacttctaaaaggttttccaaaactaatgagatatggaacagatgtt 480

                                                                       
Query: 481 ccaccgaaattggagttgtttcaccatattctggttaaaaaattgtaactaattttatta 540
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 481 ccaccgaaattggagttgtttcaccatattctggttaaaaaaatgtaactaattttatta 540

                                 
Query: 541 tttgaacaatactattatttcc 562
           ||||||||||||||||||||||
Sbjct: 541 tttgaacaatactattatttcc 562
>At5g47980.1 68418.m05927 transferase family protein similar to alcohol
            acyltransferase [Fragaria x
            ananassa][GI:10121328][PMID:10810141], deacetylvindoline
            4-O-acetyltransferase [Catharanthus
            roseus][GI:4091808][PMID:9681034]
          Length = 1589

 Score = 40.1 bits (20), Expect = 0.020
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 225  agtaaatattcaaagaaaca 244
            ||||||||||||||||||||
Sbjct: 1512 agtaaatattcaaagaaaca 1493
>At5g03040.1 68418.m00252 calmodulin-binding family protein similar to SF16
            protein [Helianthus annuus] GI:560150; contains Pfam
            profile PF00612: IQ calmodulin-binding motif
          Length = 1912

 Score = 40.1 bits (20), Expect = 0.020
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 227  taaatattcaaagaaacaaa 246
            ||||||||||||||||||||
Sbjct: 1815 taaatattcaaagaaacaaa 1796
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, putative /
           cyclophilin, putative / rotamase, putative similar to
           cyclophilin [Arabidopsis thaliana]
           gi|2443755|gb|AAB71401
          Length = 794

 Score = 38.2 bits (19), Expect = 0.077
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 1   aaaaacaaagaaaatcaat 19
           |||||||||||||||||||
Sbjct: 765 aaaaacaaagaaaatcaat 783
>At3g55910.1 68416.m06213 expressed protein PA26, p53 regulated PA26-T3 nuclear
           protein, Homo sapiens, EMBL:AF033121
          Length = 488

 Score = 38.2 bits (19), Expect = 0.077
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 1   aaaaacaaagaaaatcaat 19
           |||||||||||||||||||
Sbjct: 485 aaaaacaaagaaaatcaat 467
  Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
    Posted date:  Jun 25, 2004 12:58 PM
  Number of letters in database: 44,058,232
  Number of sequences in database:  29,161
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,053
Number of Sequences: 29161
Number of extensions: 21053
Number of successful extensions: 1757
Number of sequences better than 10.0: 42
length of query: 562
length of database: 44,058,232
effective HSP length: 17
effective length of query: 545
effective length of database: 43,562,495
effective search space: 23741559775
effective search space used: 23741559775
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)