BLASTN 2.2.3 [Apr-24-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 10658.F
         (580 letters)

Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa 
           29,161 sequences; 44,058,232 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g52975.1  68418.m06577 expressed protein                      1132   0.0  
At5g52965.1  68418.m06573 hypothetical protein                    531   e-150
At2g27315.1  68415.m03283 hypothetical protein                    293   8e-79
At4g35165.1  68417.m04999 hypothetical protein                     74   1e-12
At5g54062.1  68418.m06725 hypothetical protein                     62   6e-09
>At5g52975.1 68418.m06577 expressed protein
          Length = 579

 Score = 1132 bits (571), Expect = 0.0
 Identities = 577/579 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atccaaacatctaaaccaaaaaggaaacaaaacatatcaaagggttaacaaagaaagatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atccaaacatctaaaccaaaaaggaaacaaaacatatcaaagggttaacaaagaaagatg 60

                                                                       
Query: 61  ggaagcaaaactattctctcagtcattttgattgtttccctttgtgttgccatttttgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggaagcaaaactattctctcagtcattttgattgtttccctttgtgttgccatttttgtc 120

                                                                       
Query: 121 actcaaggagtagctcatatgcaaacaccaccgacgacggttccaggacttttcccacct 180
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 actcaaggagtagctcatatgcaaacaccaccgacgacggttccaggaattttcccacct 180

                                                                       
Query: 181 ggcttacctattgatcttgtaaaatgttggtcgtctctcttcaatgttgaaggatgtgtg 240
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcttacctattgatctggtaaaatgttggtcgtctctcttcaatgttgaaggatgtgtg 240

                                                                       
Query: 241 ctcgagatcgccaaatcaattttctctggaaaattcgaaaatgtcgaagccgcatgttgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcgagatcgccaaatcaattttctctggaaaattcgaaaatgtcgaagccgcatgttgc 300

                                                                       
Query: 301 aaggcgttttcgaccttagatgctaactgttggcctcacatgtttccgttgaatccgttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggcgttttcgaccttagatgctaactgttggcctcacatgtttccgttgaatccgttc 360

                                                                       
Query: 361 ttccctcctctcctcaaggatagctgcgctcgtattgtccccaactcccctacacacaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttccctcctctcctcaaggatagctgcgctcgtattgtccccaactcccctacacacaac 420

                                                                       
Query: 421 taagagcaagaatggttgttgatctacacttttaaattagtagttagcttcagagtaata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taagagcaagaatggttgttgatctacacttttaaattagtagttagcttcagagtaata 480

                                                                       
Query: 481 acctaagttttatagttaaattctatgttggcaaaatgtgaactcatattttatgagacc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acctaagttttatagttaaattctatgttggcaaaatgtgaactcatattttatgagacc 540

                                                  
Query: 541 tctttataggttttctcaataaagtagcaatattcatcg 579
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctttataggttttctcaataaagtagcaatattcatcg 579
>At5g52965.1 68418.m06573 hypothetical protein
          Length = 363

 Score =  531 bits (268), Expect = e-150
 Identities = 336/358 (93%), Gaps = 3/358 (0%)
 Strand = Plus / Plus

                                                                       
Query: 66  caaaactattctctcagtcattttgattgtttccctttgtgttgccatttttgtcactca 125
           ||||||| |||||||| ||  ||| || ||||||||||||| ||||||||||||| ||||
Sbjct: 9   caaaacttttctctcaatctctttaatggtttccctttgtgctgccatttttgtctctca 68

                                                                       
Query: 126 aggagtagctcatatgcaaacaccaccgacgacggttccaggacttttcccacctggctt 185
           ||||||||||||||||||||||||||| |||   |||||||||||| ||| |||||||||
Sbjct: 69  aggagtagctcatatgcaaacaccaccaacg---gttccaggacttctcctacctggctt 125

                                                                       
Query: 186 acctattgatcttgtaaaatgttggtcgtctctcttcaatgttgaaggatgtgtgctcga 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 acctattgatcttgtaaaatgttggtcgtctctcttcaatgttgaaggatgtgtgctcga 185

                                                                       
Query: 246 gatcgccaaatcaattttctctggaaaattcgaaaatgtcgaagccgcatgttgcaaggc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gatcgccaaatcaattttctctggaaaattcgaaaatgtcgaagccgcatgttgcaaggc 245

                                                                       
Query: 306 gttttcgaccttagatgctaactgttggcctcacatgtttccgttgaatccgttcttccc 365
           |||||| ||||||||||||||||||||||| || ||||||||||||||||| || |||||
Sbjct: 246 gttttcaaccttagatgctaactgttggccccatatgtttccgttgaatccatttttccc 305

                                                                     
Query: 366 tcctctcctcaaggatagctgcgctcgtattgtccccaactcccctacacacaactaa 423
           ||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 306 tcctctcctcaaggacaactgcgctcgcattgtccccaactcccctacacacaactaa 363
>At2g27315.1 68415.m03283 hypothetical protein
          Length = 363

 Score =  293 bits (148), Expect = 8e-79
 Identities = 312/366 (85%), Gaps = 3/366 (0%)
 Strand = Plus / Plus

                                                                       
Query: 58  atgggaagcaaaactattctctcagtcattttgattgtttccctttgtgttgccattttt 117
           |||||||||||| ||||| | |||||| | || || |  |||||||||| | ||||||||
Sbjct: 1   atgggaagcaaagctattgtatcagtcttgttaatggcatccctttgtggtaccattttt 60

                                                                       
Query: 118 gtcactcaaggagtagctcatatgcaaacaccaccgacgacggttccaggacttttccca 177
           || || |||||||||||| | |||||||  ||||||| |    ||||||||||||||| |
Sbjct: 61  gttacacaaggagtagctgaaatgcaaaagccaccgatgt---ttccaggacttttccaa 117

                                                                       
Query: 178 cctggcttacctattgatcttgtaaaatgttggtcgtctctcttcaatgttgaaggatgt 237
           || |||| |||  |||||||||||||||||  ||||||||||| ||| ||||||||||||
Sbjct: 118 ccaggctcacccgttgatcttgtaaaatgtatgtcgtctctctccaacgttgaaggatgt 177

                                                                       
Query: 238 gtgctcgagatcgccaaatcaattttctctggaaaattcgaaaatgtcgaagccgcatgt 297
           |||||||| ||| | |||||||||||||| || ||||| |||||| | |||| |||||||
Sbjct: 178 gtgctcgaaatctctaaatcaattttctccggcaaatttgaaaatattgaaggcgcatgt 237

                                                                       
Query: 298 tgcaaggcgttttcgaccttagatgctaactgttggcctcacatgtttccgttgaatccg 357
           ||||||||||||||| |||||||||| |||||||||||  | ||||||||||||||||||
Sbjct: 238 tgcaaggcgttttcggccttagatgccaactgttggcccgaaatgtttccgttgaatccg 297

                                                                       
Query: 358 ttcttccctcctctcctcaaggatagctgcgctcgtattgtccccaactcccctacacac 417
           || ||||||||||||||||||||||  || || ||||||||||| || || |||||||| 
Sbjct: 298 tttttccctcctctcctcaaggatatttgtgcacgtattgtcccaaaatctcctacacat 357

                 
Query: 418 aactaa 423
           ||||||
Sbjct: 358 aactaa 363
>At4g35165.1 68417.m04999 hypothetical protein
          Length = 363

 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                       
Query: 292 gcatgttgcaaggcgttttcgaccttagatgctaactgttggcctcacatgtttccgttg 351
           ||||||||||| || || |||||| |||||||||||||||||||||| ||||| ||| | 
Sbjct: 235 gcatgttgcaaagcattgtcgaccatagatgctaactgttggcctcatatgttcccgctt 294

                                        
Query: 352 aatccgttcttccctcctctcctcaagga 380
           || |||||||| || ||||| || |||||
Sbjct: 295 aacccgttctttccacctctgcttaagga 323
>At5g54062.1 68418.m06725 hypothetical protein
          Length = 624

 Score = 61.9 bits (31), Expect = 6e-09
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 319 gatgctaactgttggcctcacatgtttccgttgaatccgttcttccctcctctcctcaag 378
           ||||| || ||||||||  | ||||||||||||||||| || ||||||||||| ||||||
Sbjct: 256 gatgcaaagtgttggccaaaaatgtttccgttgaatccattattccctcctcttctcaag 315

              
Query: 379 gat 381
           |||
Sbjct: 316 gat 318

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 319 gatgctaactgttggcctcacatgtttccgttgaatccgttcttccctcctctcctcaa 377
           ||||| || ||||||||  | ||||||||  | ||||||||||||||||||||||||||
Sbjct: 520 gatgcaaaatgttggccaaaaatgtttccactaaatccgttcttccctcctctcctcaa 578
  Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
    Posted date:  Jun 25, 2004 12:58 PM
  Number of letters in database: 44,058,232
  Number of sequences in database:  29,161
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,197
Number of Sequences: 29161
Number of extensions: 18197
Number of successful extensions: 1484
Number of sequences better than 10.0: 46
length of query: 580
length of database: 44,058,232
effective HSP length: 17
effective length of query: 563
effective length of database: 43,562,495
effective search space: 24525684685
effective search space used: 24525684685
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)