BLASTN 2.2.3 [Apr-24-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= orF136b.F
         (411 letters)

Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa 
           29,161 sequences; 44,058,232 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AtMg01310  orf136b#hypothetical protein                           815   0.0  
At2g07691.1  68415.m00941 hypothetical protein                    815   0.0  
At4g04490.1  68417.m00651 protein kinase family protein cont...    34   0.87 
At4g00955.1  68417.m00129 expressed protein                        34   0.87 
At3g05680.1  68416.m00634 expressed protein                        34   0.87 
>AtMg01310 orf136b#hypothetical protein
          Length = 411

 Score =  815 bits (411), Expect = 0.0
 Identities = 411/411 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctgaagagaaaattgaagcctaaacgacttcaattgcctcctcaggatgtcgtcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgctgaagagaaaattgaagcctaaacgacttcaattgcctcctcaggatgtcgtcttt 60

                                                                       
Query: 61  gaaggggaggcagctatgaatgagtatactttctatcgtaactgggtggaatcctggtta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaaggggaggcagctatgaatgagtatactttctatcgtaactgggtggaatcctggtta 120

                                                                       
Query: 121 cagcacatccgttcatactaccttcttttcattgatggagatccttctctttcaaagttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagcacatccgttcatactaccttcttttcattgatggagatccttctctttcaaagttc 180

                                                                       
Query: 181 tttgagattgagatatgtgcccactcttggaagcgttcgactttcgaccaacaggtcttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttgagattgagatatgtgcccactcttggaagcgttcgactttcgaccaacaggtcttt 240

                                                                       
Query: 241 aagtttggccttctatgggagtgtgtggatattgctcgctctagaacagtttattggcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagtttggccttctatgggagtgtgtggatattgctcgctctagaacagtttattggcaa 300

                                                                       
Query: 301 tgtgctttaggcacaggtcatatacaggaagataaggtatcggaggcaacaagccccttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtgctttaggcacaggtcatatacaggaagataaggtatcggaggcaacaagccccttt 360

                                                              
Query: 361 accgatgacagttgtaccaacagctgtttatcaaggatgactggacaataa 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accgatgacagttgtaccaacagctgtttatcaaggatgactggacaataa 411
>At2g07691.1 68415.m00941 hypothetical protein
          Length = 411

 Score =  815 bits (411), Expect = 0.0
 Identities = 411/411 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctgaagagaaaattgaagcctaaacgacttcaattgcctcctcaggatgtcgtcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgctgaagagaaaattgaagcctaaacgacttcaattgcctcctcaggatgtcgtcttt 60

                                                                       
Query: 61  gaaggggaggcagctatgaatgagtatactttctatcgtaactgggtggaatcctggtta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaaggggaggcagctatgaatgagtatactttctatcgtaactgggtggaatcctggtta 120

                                                                       
Query: 121 cagcacatccgttcatactaccttcttttcattgatggagatccttctctttcaaagttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagcacatccgttcatactaccttcttttcattgatggagatccttctctttcaaagttc 180

                                                                       
Query: 181 tttgagattgagatatgtgcccactcttggaagcgttcgactttcgaccaacaggtcttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttgagattgagatatgtgcccactcttggaagcgttcgactttcgaccaacaggtcttt 240

                                                                       
Query: 241 aagtttggccttctatgggagtgtgtggatattgctcgctctagaacagtttattggcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagtttggccttctatgggagtgtgtggatattgctcgctctagaacagtttattggcaa 300

                                                                       
Query: 301 tgtgctttaggcacaggtcatatacaggaagataaggtatcggaggcaacaagccccttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtgctttaggcacaggtcatatacaggaagataaggtatcggaggcaacaagccccttt 360

                                                              
Query: 361 accgatgacagttgtaccaacagctgtttatcaaggatgactggacaataa 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accgatgacagttgtaccaacagctgtttatcaaggatgactggacaataa 411
>At4g04490.1 68417.m00651 protein kinase family protein contains Pfam PF00069:
            Protein kinase domain
          Length = 1977

 Score = 34.2 bits (17), Expect = 0.87
 Identities = 20/21 (95%)
 Strand = Plus / Minus

                                 
Query: 162  tccttctctttcaaagttctt 182
            ||||||| |||||||||||||
Sbjct: 1644 tccttctgtttcaaagttctt 1624
>At4g00955.1 68417.m00129 expressed protein
          Length = 1161

 Score = 34.2 bits (17), Expect = 0.87
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 381 cagctgtttatcaagga 397
           |||||||||||||||||
Sbjct: 514 cagctgtttatcaagga 498
>At3g05680.1 68416.m00634 expressed protein
          Length = 6424

 Score = 34.2 bits (17), Expect = 0.87
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 238 tttaagtttggccttct 254
           |||||||||||||||||
Sbjct: 831 tttaagtttggccttct 847
  Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
    Posted date:  Jun 25, 2004 12:58 PM
  Number of letters in database: 44,058,232
  Number of sequences in database:  29,161
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,186
Number of Sequences: 29161
Number of extensions: 11186
Number of successful extensions: 847
Number of sequences better than 10.0: 18
length of query: 411
length of database: 44,058,232
effective HSP length: 17
effective length of query: 394
effective length of database: 43,562,495
effective search space: 17163623030
effective search space used: 17163623030
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)