BLASTN 2.2.3 [Apr-24-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= orF102.F
         (369 letters)

Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa 
           29,161 sequences; 44,058,232 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AtMg01250  orf102#hypothetical protein                            731   0.0  
At5g47950.1  68418.m05924 transferase family protein similar...    38   0.050
At3g04880.1  68416.m00530 DNA-damage-repair/toleration prote...    38   0.050
At3g04870.2  68416.m00529 zeta-carotene desaturase (ZDS1) / ...    38   0.050
At3g04870.1  68416.m00528 zeta-carotene desaturase (ZDS1) / ...    38   0.050

>AtMg01250 orf102#hypothetical protein
          Length = 369

 Score =  731 bits (369), Expect = 0.0
 Identities = 369/369 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggttatggagtgtgtcacttctatctcctattcattatcaatggagcccctcaaggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgggttatggagtgtgtcacttctatctcctattcattatcaatggagcccctcaaggt 60

                                                                       
Query: 61  ttagtcaccccatctcgaggtcttcgtcaaggagatccactttccccatacctctttatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttagtcaccccatctcgaggtcttcgtcaaggagatccactttccccatacctctttatc 120

                                                                       
Query: 121 ctatgtacggaggtgctctcaggattatgtcgaagagctcaggaacaaggacgtttgcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctatgtacggaggtgctctcaggattatgtcgaagagctcaggaacaaggacgtttgcct 180

                                                                       
Query: 181 ggtattagagtatcaaacaacagcccccgtatcaaccatctcctctttgcagatgacact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtattagagtatcaaacaacagcccccgtatcaaccatctcctctttgcagatgacact 240

                                                                       
Query: 241 tcttctgcaagatggatcccactagctgctcaaatctggccgatattctttctaagtatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcttctgcaagatggatcccactagctgctcaaatctggccgatattctttctaagtatg 300

                                                                       
Query: 301 aggctgtttcagggcaacccagtcaaccacccgatgtcgaacctttactttctcggctca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggctgtttcagggcaacccagtcaaccacccgatgtcgaacctttactttctcggctca 360

                    
Query: 361 cttccatga 369
           |||||||||
Sbjct: 361 cttccatga 369



>At5g47950.1 68418.m05924 transferase family protein similar to
           deacetylvindoline 4-O-acetyltransferase [Catharanthus
           roseus][GI:4091808][PMID:9681034],
           acetyl-CoA:benzylalcohol acetyltranferase [Clarkia
           concinna][GI:6166328][PMID:10588064]
          Length = 1516

 Score = 38.2 bits (19), Expect = 0.050
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 150 tcgaagagctcaggaacaa 168
           |||||||||||||||||||
Sbjct: 707 tcgaagagctcaggaacaa 725



>At3g04880.1 68416.m00530 DNA-damage-repair/toleration protein (DRT102)
           identical to DNA-damage-toleration protein DRT102
           SP:Q05212 from [Arabidopsis thaliana]; contains Pfam
           profile: PF02502 ribose/galactose isomerase
          Length = 1082

 Score = 38.2 bits (19), Expect = 0.050
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 75  tcgaggtcttcgtcaagga 93
           |||||||||||||||||||
Sbjct: 913 tcgaggtcttcgtcaagga 895



>At3g04870.2 68416.m00529 zeta-carotene desaturase (ZDS1) / carotene
            7,8-desaturase identical to SP|Q38893 Zeta-carotene
            desaturase, chloroplast precursor (EC 1.14.99.30)
            (Carotene 7,8-desaturase) {Arabidopsis thaliana}
          Length = 3055

 Score = 38.2 bits (19), Expect = 0.050
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 75   tcgaggtcttcgtcaagga 93
            |||||||||||||||||||
Sbjct: 2096 tcgaggtcttcgtcaagga 2114



>At3g04870.1 68416.m00528 zeta-carotene desaturase (ZDS1) / carotene
            7,8-desaturase identical to SP|Q38893 Zeta-carotene
            desaturase, chloroplast precursor (EC 1.14.99.30)
            (Carotene 7,8-desaturase) {Arabidopsis thaliana}
          Length = 3033

 Score = 38.2 bits (19), Expect = 0.050
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 75   tcgaggtcttcgtcaagga 93
            |||||||||||||||||||
Sbjct: 2074 tcgaggtcttcgtcaagga 2092



  Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
    Posted date:  Jun 25, 2004 12:58 PM
  Number of letters in database: 44,058,232
  Number of sequences in database:  29,161
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8934
Number of Sequences: 29161
Number of extensions: 8934
Number of successful extensions: 626
Number of sequences better than 10.0: 14
length of query: 369
length of database: 44,058,232
effective HSP length: 17
effective length of query: 352
effective length of database: 43,562,495
effective search space: 15333998240
effective search space used: 15333998240
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)