BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At3g42100.F
(5259 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g42100.1 68416.m04322 AT hook motif-containing protein-r... 1.043e+04 0.0
At5g32070.1 68418.m03689 hypothetical protein 484 e-135
At3g13250.1 68416.m01668 hypothetical protein low similarit... 305 2e-81
At1g35940.1 68414.m04463 AT hook motif-containing protein-r... 283 7e-75
At5g34960.1 68418.m04125 hypothetical protein includes At5g... 238 4e-61
>At3g42100.1 68416.m04322 AT hook motif-containing protein-related very low
similarity to SP|Q9UUA2 DNA repair and recombination
protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; weak hit to Pfam profile
PF02178: AT hook motif
Length = 5259
Score = 1.043e+04 bits (5259), Expect = 0.0
Identities = 5259/5259 (100%)
Strand = Plus / Plus
Query: 1 atgaaaaacaaacaagattcttcttctcctgaaacaaatattgattctaatccatcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaaaaacaaacaagattcttcttctcctgaaacaaatattgattctaatccatcaaag 60
Query: 61 aggacccgttttcagagcattgaaacaccacaaagtcaaataactcacagtactaccgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggacccgttttcagagcattgaaacaccacaaagtcaaataactcacagtactaccgcg 120
Query: 121 gatactaatgcaacagttcctcttacttcagcattctctagagtttttaaagatattaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatactaatgcaacagttcctcttacttcagcattctctagagtttttaaagatattaca 180
Query: 181 aaccttgggtatagctctgttggcagcttcttgacaccatctaacaatcaacaatcctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaccttgggtatagctctgttggcagcttcttgacaccatctaacaatcaacaatcctat 240
Query: 241 tctgcaaaaaaaactcactcaacaaatatagggtccactgttgtttctggacttgcttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctgcaaaaaaaactcactcaacaaatatagggtccactgttgtttctggacttgcttca 300
Query: 301 atggtccaagcaaactccagacatatgaagcaatctcaagctgttgtatttaaagacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggtccaagcaaactccagacatatgaagcaatctcaagctgttgtatttaaagacatg 360
Query: 361 accaaccttccctccatggggctttcgtctgcaactggaaaaggaaaagcgagccaaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accaaccttccctccatggggctttcgtctgcaactggaaaaggaaaagcgagccaaaac 420
Query: 421 gaaagtactacttcttgcatgttctttcacaaacagactactttgcagacagaaaaagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaagtactacttcttgcatgttctttcacaaacagactactttgcagacagaaaaagac 480
Query: 481 agattcccaaggaaaaatctccaaaatgactttgaaaatgccttccactctcctattact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agattcccaaggaaaaatctccaaaatgactttgaaaatgccttccactctcctattact 540
Query: 541 caaggtcaaagttcggccaccatcaataatgactttcattgtgaaatgtctgatgatgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caaggtcaaagttcggccaccatcaataatgactttcattgtgaaatgtctgatgatgaa 600
Query: 601 tccatgcctgatttcaactatgatagttcatcaaccaatgcaacagatgaggatcaacac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tccatgcctgatttcaactatgatagttcatcaaccaatgcaacagatgaggatcaacac 660
Query: 661 tactatctcagtccaactgaagatgatactgatgatgaatctactatttctattccagtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tactatctcagtccaactgaagatgatactgatgatgaatctactatttctattccagtt 720
Query: 721 gctgacccatcatctgacatctgccagaacaatgcaaacccgacagaacctacaacgcct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gctgacccatcatctgacatctgccagaacaatgcaaacccgacagaacctacaacgcct 780
Query: 781 catatcgccaaatgtgcagaacatgaaaaattcattgctactcttaagaaaacggctgca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 catatcgccaaatgtgcagaacatgaaaaattcattgctactcttaagaaaacggctgca 840
Query: 841 aaagcagcagcaaacccgaatttgccgcagccaaagaaaagaggaaggccacgattgaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aaagcagcagcaaacccgaatttgccgcagccaaagaaaagaggaaggccacgattgaat 900
Query: 901 aaagatacaaccaattcggctgagactgcaacaaaatcagcttaccttgatcatggtgat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aaagatacaaccaattcggctgagactgcaacaaaatcagcttaccttgatcatggtgat 960
Query: 961 gcaacatacaagtgcaactactgtggggcgttgatgtggtttgctgagcgtataaataag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gcaacatacaagtgcaactactgtggggcgttgatgtggtttgctgagcgtataaataag 1020
Query: 1021 aagcagcaaaacaaatctcctacgtttacactgtgttgtggaaaaggaaatgttaagtta 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 aagcagcaaaacaaatctcctacgtttacactgtgttgtggaaaaggaaatgttaagtta 1080
Query: 1081 ccacttcttaaagattcgcctgcgcttataaacaaccttcttaccggtgatgatgcgcta 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ccacttcttaaagattcgcctgcgcttataaacaaccttcttaccggtgatgatgcgcta 1140
Query: 1141 agcagaaatttcagagaaaatatccgaatctacaatatgatttttgcaatgacttcactt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 agcagaaatttcagagaaaatatccgaatctacaatatgatttttgcaatgacttcactt 1200
Query: 1201 ggtggaagagttgataactctatgccaaaaggtaaaggaccaaacatgtttagactacaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggtggaagagttgataactctatgccaaaaggtaaaggaccaaacatgtttagactacaa 1260
Query: 1261 ggaggaaactaccatttgattggcagcttgaagcctaatccgggtgattatgctaagtat 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ggaggaaactaccatttgattggcagcttgaagcctaatccgggtgattatgctaagtat 1320
Query: 1321 tcacaactttacatagttgatacagaaaacgaagttgataacagagctactgtcatcaac 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tcacaactttacatagttgatacagaaaacgaagttgataacagagctactgtcatcaac 1380
Query: 1381 aagggaaaaggtcgtcggaatacaccagcaaaacagaagctaaagaaagaagttattgaa 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 aagggaaaaggtcgtcggaatacaccagcaaaacagaagctaaagaaagaagttattgaa 1440
Query: 1441 gccctcattgaaatgctaaacaaagtcaacccttatgttgacaaattcagacaagctaga 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gccctcattgaaatgctaaacaaagtcaacccttatgttgacaaattcagacaagctaga 1500
Query: 1501 gagagaattcaagatgataatgatgaaccgtttcacatgcggattgttgcagatcgaaag 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gagagaattcaagatgataatgatgaaccgtttcacatgcggattgttgcagatcgaaag 1560
Query: 1561 ggtgttgataggaggacatacagtatgcctacatcatctgaggttgccgctttaatacct 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ggtgttgataggaggacatacagtatgcctacatcatctgaggttgccgctttaatacct 1620
Query: 1621 ggaggttttcagccatcgatgttcgaccgagatatagtccttgaagaaaagactacaggt 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ggaggttttcagccatcgatgttcgaccgagatatagtccttgaagaaaagactacaggt 1680
Query: 1681 catctaacacggataagtcagattcatatctcctacttggcattgcaatatcctcttatt 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 catctaacacggataagtcagattcatatctcctacttggcattgcaatatcctcttatt 1740
Query: 1741 ttgtgctatggcgaagatggttacactcctggtatagagaaatgcttgcccaattcagcc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ttgtgctatggcgaagatggttacactcctggtatagagaaatgcttgcccaattcagcc 1800
Query: 1801 aagaagaaaaagaaaaagtgtataagtatgcgtcaatggtttgctttcaggatacaagag 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 aagaagaaaaagaaaaagtgtataagtatgcgtcaatggtttgctttcaggatacaagag 1860
Query: 1861 agaccaaatgagtgtaaaaccttgacacgctcaaagaggttatttcaacaatttctctgt 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 agaccaaatgagtgtaaaaccttgacacgctcaaagaggttatttcaacaatttctctgt 1920
Query: 1921 gatgcttatacaactattgaatctaaccggctttcttatatcaagtttaaacaatcaaag 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gatgcttatacaactattgaatctaaccggctttcttatatcaagtttaaacaatcaaag 1980
Query: 1981 ctacgatgtgagaactacaacagtttgaaaaaggcctctgaagctggaactacctctatg 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ctacgatgtgagaactacaacagtttgaaaaaggcctctgaagctggaactacctctatg 2040
Query: 2041 aatgaagaaggtaaccaggttttaattccatcttccctcactggaggaccacgctatatg 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 aatgaagaaggtaaccaggttttaattccatcttccctcactggaggaccacgctatatg 2100
Query: 2101 gtccagaactactatgatgcaatggccatctgcaagcattacggtttccctgaccttttc 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gtccagaactactatgatgcaatggccatctgcaagcattacggtttccctgaccttttc 2160
Query: 2161 ataacctttacatgtaatccaaagtggcctgagataactagacattgccaagcaagaggt 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 ataacctttacatgtaatccaaagtggcctgagataactagacattgccaagcaagaggt 2220
Query: 2221 ctttctgttgatgatagacctgatattgttgcaaggatattcaaaatcaagcttgattct 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 ctttctgttgatgatagacctgatattgttgcaaggatattcaaaatcaagcttgattct 2280
Query: 2281 ctaatgaaagatttgacagatgggaaaatgctgggaaagacagttgcctctatgcatacc 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 ctaatgaaagatttgacagatgggaaaatgctgggaaagacagttgcctctatgcatacc 2340
Query: 2341 gttgaatttcagaaaagaggattaccccatgctcatatcctgttattcatggatgctaaa 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 gttgaatttcagaaaagaggattaccccatgctcatatcctgttattcatggatgctaaa 2400
Query: 2401 agtaagcttccaacagctgatgatatcgataagattatttctgcagagatcccagataaa 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 agtaagcttccaacagctgatgatatcgataagattatttctgcagagatcccagataaa 2460
Query: 2461 gataaagaacccgagctttatgaagtaatcaagaattcaatgattcatggtccatgtggt 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 gataaagaacccgagctttatgaagtaatcaagaattcaatgattcatggtccatgtggt 2520
Query: 2521 gctgcaaatatgaattccccatgtatggttgaaggtaaatgttctaaacaatacccaaag 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 gctgcaaatatgaattccccatgtatggttgaaggtaaatgttctaaacaatacccaaag 2580
Query: 2581 aaacatcaggatattaccaaagttggtaaggatggttatcccatctatcgaaggaggatg 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 aaacatcaggatattaccaaagttggtaaggatggttatcccatctatcgaaggaggatg 2640
Query: 2641 acagaagactatattgagaagggtggttttaaatgtgataatggttatgttgtcccttat 2700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 acagaagactatattgagaagggtggttttaaatgtgataatggttatgttgtcccttat 2700
Query: 2701 aataagaagctgtcacttcgatatcaagctcatatcaacgtggaatggtgtaaccagagt 2760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 aataagaagctgtcacttcgatatcaagctcatatcaacgtggaatggtgtaaccagagt 2760
Query: 2761 ggttctatcaaatacttatttaagtatatcaacaaaggagcagatcgtgttgtatttatt 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 ggttctatcaaatacttatttaagtatatcaacaaaggagcagatcgtgttgtatttatt 2820
Query: 2821 gtagagccagtcaaccaggacaaaacaacagagaatgcgacctctggagaacctccaaat 2880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 gtagagccagtcaaccaggacaaaacaacagagaatgcgacctctggagaacctccaaat 2880
Query: 2881 tctactgagaaaaaaaaggatgagatcaaagattggtttgactgcaggtacgtatccgcg 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 tctactgagaaaaaaaaggatgagatcaaagattggtttgactgcaggtacgtatccgcg 2940
Query: 2941 tcggaagctgtttggaggatttacaaatttccacttcaggatcgatctacagcagttcaa 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 tcggaagctgtttggaggatttacaaatttccacttcaggatcgatctacagcagttcaa 3000
Query: 3001 agactatctttccatgatgaagggaagcaacctgtttatgccaaaccagatgctgatatt 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 agactatctttccatgatgaagggaagcaacctgtttatgccaaaccagatgctgatatt 3060
Query: 3061 gaagatgtcctcgaacgtataagcaatgaagattcaatgttcatggcttggttgactttg 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 gaagatgtcctcgaacgtataagcaatgaagattcaatgttcatggcttggttgactttg 3120
Query: 3121 aataagaataatgatgttggaaaaaatggtaaacgtgctagagaacttctatattctcaa 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 aataagaataatgatgttggaaaaaatggtaaacgtgctagagaacttctatattctcaa 3180
Query: 3181 atccctgcctattttacttgggatggaaagaataagcagtgggttaagagaattagagga 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 atccctgcctattttacttgggatggaaagaataagcagtgggttaagagaattagagga 3240
Query: 3241 ttttctttgggtcgtattaactacgtgtgtaggaaaatggaagttgaatactatcttcga 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 ttttctttgggtcgtattaactacgtgtgtaggaaaatggaagttgaatactatcttcga 3300
Query: 3301 gtgcttctcaacatagtcaaagggcctatgagttatgatgacatcaagacatttaatggt 3360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 gtgcttctcaacatagtcaaagggcctatgagttatgatgacatcaagacatttaatggt 3360
Query: 3361 gtcgtatatccatcattcaaagaagcatgttttgcaagaggaattctggatgatgatcaa 3420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 gtcgtatatccatcattcaaagaagcatgttttgcaagaggaattctggatgatgatcaa 3420
Query: 3421 gtttatatagatggtctacatgaagccagtcagttctgttttggagattacttgagaaat 3480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 gtttatatagatggtctacatgaagccagtcagttctgttttggagattacttgagaaat 3480
Query: 3481 ttttttgctatgttgcttctatcagattctctcgcaagacccgagcacgtatggtcagaa 3540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3481 ttttttgctatgttgcttctatcagattctctcgcaagacccgagcacgtatggtcagaa 3540
Query: 3541 acatggcaccttttggcagaggatattgagaacaagaaaagagaagactttaagaatcca 3600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3541 acatggcaccttttggcagaggatattgagaacaagaaaagagaagactttaagaatcca 3600
Query: 3601 gatctgaaacttacactggctgaaattaggaactacactctgcaagaaattgagaagatt 3660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3601 gatctgaaacttacactggctgaaattaggaactacactctgcaagaaattgagaagatt 3660
Query: 3661 atgttacgtaacggtgcaacactcaaagaaattcaggattttccacagccttctagagaa 3720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3661 atgttacgtaacggtgcaacactcaaagaaattcaggattttccacagccttctagagaa 3720
Query: 3721 ggtattgataactccaaccgtttagttgttgatgagctgagatataacatagattctaac 3780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3721 ggtattgataactccaaccgtttagttgttgatgagctgagatataacatagattctaac 3780
Query: 3781 ttgaaagaaaagcatgatgagtggtttcaaatgctaaatacggagcagagaggcatatat 3840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3781 ttgaaagaaaagcatgatgagtggtttcaaatgctaaatacggagcagagaggcatatat 3840
Query: 3841 gatgagataaccggtgctgttttcaatgatttgggaggtgttttttttatttatggtttt 3900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3841 gatgagataaccggtgctgttttcaatgatttgggaggtgttttttttatttatggtttt 3900
Query: 3901 ggaggaactggaaaaacttttatctggaagacattagcagctgctgttagatctagagga 3960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3901 ggaggaactggaaaaacttttatctggaagacattagcagctgctgttagatctagagga 3960
Query: 3961 cagattgtgcttaatgtagcctccagcggcattgcgtctttgttgttagaaggtggacgg 4020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3961 cagattgtgcttaatgtagcctccagcggcattgcgtctttgttgttagaaggtggacgg 4020
Query: 4021 acagcacattcaaggtttgctatcccactaaatcctgacgagttttctgtttgcaagatc 4080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4021 acagcacattcaaggtttgctatcccactaaatcctgacgagttttctgtttgcaagatc 4080
Query: 4081 acaccaaaatctgatcttgctaatttgattaaagaagcatctcttattatttgggatgaa 4140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4081 acaccaaaatctgatcttgctaatttgattaaagaagcatctcttattatttgggatgaa 4140
Query: 4141 gcgccaatgatgagcaaattctgttttgagtctttagataaaagcttctacgatatactc 4200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4141 gcgccaatgatgagcaaattctgttttgagtctttagataaaagcttctacgatatactc 4200
Query: 4201 aataacaaagacaacaaagtttttggtggaaaggtagttgtttttggcggtgattttaga 4260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4201 aataacaaagacaacaaagtttttggtggaaaggtagttgtttttggcggtgattttaga 4260
Query: 4261 caagtacttccggttattaatggtgcagggagagtagaaattgtgatgtcttcactcaat 4320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4261 caagtacttccggttattaatggtgcagggagagtagaaattgtgatgtcttcactcaat 4320
Query: 4321 gcctcatacctttgggaccactgcaaggttctgaaattaacaaagaacatgcgactccta 4380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4321 gcctcatacctttgggaccactgcaaggttctgaaattaacaaagaacatgcgactccta 4380
Query: 4381 tcaggcggtttaagtagcgaggaagctaaagagatacaacagttttctgattggttattg 4440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4381 tcaggcggtttaagtagcgaggaagctaaagagatacaacagttttctgattggttattg 4440
Query: 4441 gctgtcggtgatggtaggattaatgagcctaatgatggagaggcacttattgatattcca 4500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4441 gctgtcggtgatggtaggattaatgagcctaatgatggagaggcacttattgatattcca 4500
Query: 4501 gaggaattgttgattaaagaagcaggaaacccaatagaagctatcagtaaggaaatttat 4560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4501 gaggaattgttgattaaagaagcaggaaacccaatagaagctatcagtaaggaaatttat 4560
Query: 4561 ggggatccgtcagaactgcatatgataaatgatcctaagtttttccaaaggagagctatt 4620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4561 ggggatccgtcagaactgcatatgataaatgatcctaagtttttccaaaggagagctatt 4620
Query: 4621 ttagcaccaaccaatgaagacgtcaatactataaaccagtatatgctggaacatttgaaa 4680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4621 ttagcaccaaccaatgaagacgtcaatactataaaccagtatatgctggaacatttgaaa 4680
Query: 4681 agtgaagaacggatctatttaagtgctgatagcattgacccaacagattcggactcactc 4740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4681 agtgaagaacggatctatttaagtgctgatagcattgacccaacagattcggactcactc 4740
Query: 4741 gccaatcctgtaattactccagattttttgaacagtatacagctgacaggtatgcctcac 4800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4741 gccaatcctgtaattactccagattttttgaacagtatacagctgacaggtatgcctcac 4800
Query: 4801 cacgctttacggttgaaggttggtgctcctgttatgttgcttaggaatcttgatccaaaa 4860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4801 cacgctttacggttgaaggttggtgctcctgttatgttgcttaggaatcttgatccaaaa 4860
Query: 4861 ggaggcctttgtaatgggactaggctacagattacacaacttgccaaacaagttgttcaa 4920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4861 ggaggcctttgtaatgggactaggctacagattacacaacttgccaaacaagttgttcaa 4920
Query: 4921 gccaaagtaataactcgagatagaattggtgacatcgtgttgattcctctaattaacctt 4980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4921 gccaaagtaataactcgagatagaattggtgacatcgtgttgattcctctaattaacctt 4980
Query: 4981 acaccttcagatacaaagctgccattcaagatgcgcagaaggcaatttccactgtcagtt 5040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 acaccttcagatacaaagctgccattcaagatgcgcagaaggcaatttccactgtcagtt 5040
Query: 5041 gcttttgctatgaccatcaataagagtcagggtcaatcactcgagcaagttggactctac 5100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 gcttttgctatgaccatcaataagagtcagggtcaatcactcgagcaagttggactctac 5100
Query: 5101 ttgcctaaacctgtattctcccatggccaactctatgttgctttgtccagggttacctcc 5160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5101 ttgcctaaacctgtattctcccatggccaactctatgttgctttgtccagggttacctcc 5160
Query: 5161 aaaaaaggtttgaaaatcctaatactagacaaagacggaaacatgcaaaaacaaacaaca 5220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5161 aaaaaaggtttgaaaatcctaatactagacaaagacggaaacatgcaaaaacaaacaaca 5220
Query: 5221 aacgttgttttcaaggaggttttccaaaacatagtttga 5259
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5221 aacgttgttttcaaggaggttttccaaaacatagtttga 5259
>At5g32070.1 68418.m03689 hypothetical protein
Length = 1020
Score = 484 bits (244), Expect = e-135
Identities = 349/384 (90%)
Strand = Plus / Plus
Query: 3633 ctacactctgcaagaaattgagaagattatgttacgtaacggtgcaacactcaaagaaat 3692
|||||||||||||||||||||||||||||||||| ||| ||||| |||| | |||| ||
Sbjct: 18 ctacactctgcaagaaattgagaagattatgttatttaatggtgctacacaccaagatat 77
Query: 3693 tcaggattttccacagccttctagagaaggtattgataactccaaccgtttagttgttga 3752
|||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 78 tcaggattccccgcagccttctagagaaggtattgataactctaaccgtttagttgttga 137
Query: 3753 tgagctgagatataacatagattctaacttgaaagaaaagcatgatgagtggtttcaaat 3812
|||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||| ||
Sbjct: 138 tgagctgagacataacctagattctaacttgcaagaaaagcatgacgagtggtttcagat 197
Query: 3813 gctaaatacggagcagagaggcatatatgatgagataaccggtgctgttttcaatgattt 3872
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 198 gctaaatattgagcagagaggcatatatgatgagatcaccggtgctgttttcaatgattt 257
Query: 3873 gggaggtgttttttttatttatggttttggaggaactggaaaaacttttatctggaagac 3932
|| |||||||||| | ||||||||||| |||| ||||| |||| |||||| ||||||||
Sbjct: 258 ggaaggtgtttttggtttttatggttttagagggactgggaaaatttttatgtggaagac 317
Query: 3933 attagcagctgctgttagatctagaggacagattgtgcttaatgtagcctccagcggcat 3992
||||||||||||| |||||| ||||||||| |||||||||||||| ||||| || |||||
Sbjct: 318 attagcagctgctattagatgtagaggacatattgtgcttaatgtcgcctcgagtggcat 377
Query: 3993 tgcgtctttgttgttagaaggtgg 4016
|||||||||||||||| |||||||
Sbjct: 378 tgcgtctttgttgttaaaaggtgg 401
Score = 375 bits (189), Expect = e-102
Identities = 306/345 (88%)
Strand = Plus / Plus
Query: 4897 caacttgccaaacaagttgttcaagccaaagtaataactcgagatagaattggtgacatc 4956
|||||| ||||||||||||| |||| | |||||||||| |||||||||||||||| ||
Sbjct: 631 caacttaccaaacaagttgtgcaagtgagagtaataactggagatagaattggtgaaatt 690
Query: 4957 gtgttgattcctctaattaaccttacaccttcagatacaaagctgccattcaagatgcgc 5016
|| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 691 gtcttgattcctctaatcaaccttacaccttcagatatgaagctgccattcaagatgcga 750
Query: 5017 agaaggcaatttccactgtcagttgcttttgctatgaccatcaataagagtcagggtcaa 5076
||||| || ||| ||||||| ||||| |||||||| || ||||||||||| ||||| |||
Sbjct: 751 agaagacagttttcactgtcggttgcatttgctataacaatcaataagagccagggacaa 810
Query: 5077 tcactcgagcaagttggactctacttgcctaaacctgtattctcccatggccaactctat 5136
||||| ||||||||||| || |||||||||||||| || ||||| | ||||||||| |||
Sbjct: 811 tcacttgagcaagttggtctttacttgcctaaacccgtcttctctcttggccaactgtat 870
Query: 5137 gttgctttgtccagggttacctccaaaaaaggtttgaaaatcctaatactagacaaagac 5196
||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 871 gttgcattgtctagggttacctcgaaaaagggtttgaaaatcctaatactagacaaagac 930
Query: 5197 ggaaacatgcaaaaacaaacaacaaacgttgttttcaaggaggtt 5241
|||||||| ||||| |||||||||||| |||||||| | ||||||
Sbjct: 931 ggaaacattcaaaagcaaacaacaaacattgttttctacgaggtt 975
Score = 131 bits (66), Expect = 7e-29
Identities = 129/150 (86%)
Strand = Plus / Plus
Query: 4682 gtgaagaacggatctatttaagtgctgatagcattgacccaacagattcggactcactcg 4741
|||||||| |||| || |||||||||||||||||||| ||||||||||| || |||||||
Sbjct: 470 gtgaagaaaggatttacttaagtgctgatagcattgatccaacagattcagattcactcg 529
Query: 4742 ccaatcctgtaattactccagattttttgaacagtatacagctgacaggtatgcctcacc 4801
| ||| |||||||||| |||||||| ||||| |||||| |||| | ||| || |||| |
Sbjct: 530 ctaattctgtaattaccccagatttcttgaatagtataaagctctcgggtttggctcatc 589
Query: 4802 acgctttacggttgaaggttggtgctcctg 4831
| |||||| | |||||||||||||||||||
Sbjct: 590 atgctttatgtttgaaggttggtgctcctg 619
Score = 119 bits (60), Expect = 3e-25
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 4384 ggcggtttaagtagcgaggaagctaaagagatacaacagttttctgattggttattggct 4443
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggcggtttaagtagcgaggaagccaaagagatacaacagttttctgattggttattggct 459
Query: 4444 gtcggtgatggt 4455
| |||||||||
Sbjct: 460 attggtgatggt 471
>At3g13250.1 68416.m01668 hypothetical protein low similarity to SP|P07271 DNA
repair and recombination protein PIF1, mitochondrial
precursor {Saccharomyces cerevisiae}
Length = 4260
Score = 305 bits (154), Expect = 2e-81
Identities = 405/486 (83%), Gaps = 2/486 (0%)
Strand = Plus / Plus
Query: 3862 ttcaatgatttgggaggtgttttttttatttatggttttggaggaactggaaaaactttt 3921
|||||||| |||||||| ||||||||| ||||||| ||||||||||| || ||||| |||
Sbjct: 2866 ttcaatgacttgggaggagttttttttgtttatggctttggaggaacagggaaaacattt 2925
Query: 3922 atctggaagacattagcagctgctgttagatctagaggacagat-tgtgcttaatgtagc 3980
|| ||||| ||| |||| ||||| || ||||||| ||||||||| ||| |||||||| ||
Sbjct: 2926 atttggaaaacactagctgctgcagtaagatctaaaggacagatatgt-cttaatgtcgc 2984
Query: 3981 ctccagcggcattgcgtctttgttgttagaaggtggacggacagcacattcaaggtttgc 4040
||| || ||||| || ||||||||||||||||| || | ||||||||||| |||||| |
Sbjct: 2985 ctcaagtggcatagcttctttgttgttagaaggaggtagaacagcacattctaggttttc 3044
Query: 4041 tatcccactaaatcctgacgagttttctgtttgcaagatcacaccaaaatctgatcttgc 4100
||| || | ||||| ||||| ||||| ||||| || |||| ||||||||| ||| | ||
Sbjct: 3045 tatacctttgaatccagacgaattttcagtttgtaaaatcaaaccaaaatcagatttagc 3104
Query: 4101 taatttgattaaagaagcatctcttattatttgggatgaagcgccaatgatgagcaaatt 4160
| || | ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct: 3105 tgatcttattaaagaagcatctctcattatttgggatgaagctccaatgatgagcaagtt 3164
Query: 4161 ctgttttgagtctttagataaaagcttctacgatatactcaataacaaagacaacaaagt 4220
|||||||| | |||||||||||||||| |||||| |||| |||||| || ||
Sbjct: 3165 ttgttttgaagcattagataaaagcttctctgatataatcaagcgtgtagacaataaggt 3224
Query: 4221 ttttggtggaaaggtagttgtttttggcggtgattttagacaagtacttccggttattaa 4280
|||||||||||| || | || || || |||||||| |||||||| || || || |||||
Sbjct: 3225 ttttggtggaaaagttatggtgttcggaggtgatttcagacaagtgctaccagtaattaa 3284
Query: 4281 tggtgcagggagagtagaaattgtgatgtcttcactcaatgcctcatacctttgggacca 4340
|||||||||||||| ||||||||| ||||| || || ||||| ||||| |||||||| ||
Sbjct: 3285 tggtgcagggagagcagaaattgttatgtcatctctaaatgcttcatatctttgggatca 3344
Query: 4341 ctgcaa 4346
||||||
Sbjct: 3345 ctgcaa 3350
Score = 272 bits (137), Expect = 3e-71
Identities = 485/601 (80%)
Strand = Plus / Plus
Query: 2229 tgatgatagacctgatattgttgcaaggatattcaaaatcaagcttgattctctaatgaa 2288
|||||||||||| || ||||| || | || |||||||||||| | |||||| |||||||
Sbjct: 1233 tgatgatagaccggacattgtcgcccgtattttcaaaatcaagttagattctttaatgaa 1292
Query: 2289 agatttgacagatgggaaaatgctgggaaagacagttgcctctatgcataccgttgaatt 2348
|||||| ||||| || | | || ||||| |||||||| |||||| | || || |||||
Sbjct: 1293 agatttaacagaaaggcatctccttggaaaaacagttgcatctatgtacacagtcgaatt 1352
Query: 2349 tcagaaaagaggattaccccatgctcatatcctgttattcatggatgctaaaagtaagct 2408
||||||||||||||||| |||||||| || || |||| |||| ||||| ||||| ||
Sbjct: 1353 ccagaaaagaggattacctcatgctcacatacttctatttatggcggctaatagtaaact 1412
Query: 2409 tccaacagctgatgatatcgataagattatttctgcagagatcccagataaagataaaga 2468
||||||||||| || ||||| ||||| || ||||| ||||| || | ||||| |||||
Sbjct: 1413 accaacagctgacgacatcgacaagataatatctgcggagattcctaacaaagacaaaga 1472
Query: 2469 acccgagctttatgaagtaatcaagaattcaatgattcatggtccatgtggtgctgcaaa 2528
||| ||||| ||||| || ||||| || || ||||| ||||| ||||||||| | |||||
Sbjct: 1473 acctgagctctatgaggttatcaaaaactctatgatgcatggaccatgtggttcagcaaa 1532
Query: 2529 tatgaattccccatgtatggttgaaggtaaatgttctaaacaatacccaaagaaacatca 2588
|| | ||| || ||||||||||| ||| | ||||| || | ||| ||||| ||||||||
Sbjct: 1533 taccagttctccgtgtatggttgatggtcagtgttcaaagctatatccaaaaaaacatca 1592
Query: 2589 ggatattaccaaagttggtaaggatggttatcccatctatcgaaggaggatgacagaaga 2648
|| || || ||||| ||| ||||||||||| |||||| | || || | ||||| ||
Sbjct: 1593 agaaatcactaaagtgggtgctgatggttatccaatctataggagaagactcacagacga 1652
Query: 2649 ctatattgagaagggtggttttaaatgtgataatggttatgttgtcccttataataagaa 2708
|||||| || ||||| ||| |||||||||| ||| | |||||||| || |||||||||||
Sbjct: 1653 ctatatagaaaaggggggtgttaaatgtgacaataggtatgttgtgccctataataagaa 1712
Query: 2709 gctgtcacttcgatatcaagctcatatcaacgtggaatggtgtaaccagagtggttctat 2768
||| || | |||| |||||||||||||| || |||||||||||||||| ||||||||
Sbjct: 1713 gctatctttaagataccaagctcatatcaatgtcgaatggtgtaaccagaacggttctat 1772
Query: 2769 caaatacttatttaagtatatcaacaaaggagcagatcgtgttgtatttattgtagagcc 2828
|||||||||||||| || ||||||||||| | || ||||| || |||||||| |||||
Sbjct: 1773 aaaatacttatttaaatacatcaacaaaggtccggaccgtgtagtttttattgttgagcc 1832
Query: 2829 a 2829
|
Sbjct: 1833 a 1833
Score = 222 bits (112), Expect = 2e-56
Identities = 256/304 (84%)
Strand = Plus / Plus
Query: 4937 gagatagaattggtgacatcgtgttgattcctctaattaaccttacaccttcagatacaa 4996
||||||| ||||| | ||||||| ||||||||||| ||| | ||||||||||||||||
Sbjct: 3941 gagataggattgggcagatcgtgtatattcctctaataaacatcacaccttcagatacaa 4000
Query: 4997 agctgccattcaagatgcgcagaaggcaatttccactgtcagttgcttttgctatgacca 5056
| || |||||||||||||| |||||||| ||||| || || ||||| |||| ||||||||
Sbjct: 4001 aactaccattcaagatgcgtagaaggcagtttcctctctctgttgcatttgttatgacca 4060
Query: 5057 tcaataagagtcagggtcaatcactcgagcaagttggactctacttgcctaaacctgtat 5116
| || ||||||||||| ||||| || |||||||| ||| | ||||||||||||||||| |
Sbjct: 4061 taaacaagagtcagggacaatctcttgagcaagtaggattgtacttgcctaaacctgttt 4120
Query: 5117 tctcccatggccaactctatgttgctttgtccagggttacctccaaaaaaggtttgaaaa 5176
|||| ||||| ||||| |||||||| ||||| |||||||| || || | ||| |||||||
Sbjct: 4121 tctctcatggtcaactatatgttgcgttgtctagggttacttctaagacagggttgaaaa 4180
Query: 5177 tcctaatactagacaaagacggaaacatgcaaaaacaaacaacaaacgttgttttcaagg 5236
| ||||| || |||||||| ||||| || ||||| ||||| || || || ||||||||||
Sbjct: 4181 tactaattctcgacaaagagggaaagatacaaaagcaaactaccaatgtggttttcaagg 4240
Query: 5237 aggt 5240
||||
Sbjct: 4241 aggt 4244
Score = 196 bits (99), Expect = 1e-48
Identities = 393/491 (80%)
Strand = Plus / Plus
Query: 4402 gaagctaaagagatacaacagttttctgattggttattggctgtcggtgatggtaggatt 4461
||||||||||| || ||| | ||||| ||||||||||||||||| |||||||| ||| |
Sbjct: 3406 gaagctaaagaaatccaagaattttccgattggttattggctgttggtgatggaagggtc 3465
Query: 4462 aatgagcctaatgatggagaggcacttattgatattccagaggaattgttgattaaagaa 4521
||||||||||||||||| |||| | |||||||| || || |||||||||||| |||||
Sbjct: 3466 aatgagcctaatgatggtgaggtgataattgatatacctgaagaattgttgattcaagaa 3525
Query: 4522 gcaggaaacccaatagaagctatcagtaaggaaatttatggggatccgtcagaactgcat 4581
|||| || || ||||||||||| |||| ||||||||||| ||||| | |||||||
Sbjct: 3526 gcagataatcctatagaagctattagtagagaaatttatggagatccaactaaactgcac 3585
Query: 4582 atgataaatgatcctaagtttttccaaaggagagctattttagcaccaaccaatgaagac 4641
|| | |||||| || || || || |||||||||||| |||| || | ||||| ||
Sbjct: 3586 gaaatcagtgatccaaaattctttcagaggagagctattctagctccgaaaaatgaggat 3645
Query: 4642 gtcaatactataaaccagtatatgctggaacatttgaaaagtgaagaacggatctattta 4701
|| || || ||||| ||||||||||| || ||| | | ||||||||| | |||||| ||
Sbjct: 3646 gttaacacaataaatcagtatatgctagagcatctcgatagtgaagaaagaatctatcta 3705
Query: 4702 agtgctgatagcattgacccaacagattcggactcactcgccaatcctgtaattactcca 4761
|||||||| || || || | |||||||||||||| |||||||| || ||||||
Sbjct: 3706 tcagctgatagtatagatccttcggattcggactcactaaaaaatcctgttatcactcca 3765
Query: 4762 gattttttgaacagtatacagctgacaggtatgcctcaccacgctttacggttgaaggtt 4821
||||| || |||||||| || | |||||||||| ||||| |||| || |||||||||
Sbjct: 3766 gatttcttaaacagtattaaggtatcaggtatgccacaccattctttgcgtttgaaggtt 3825
Query: 4822 ggtgctcctgttatgttgcttaggaatcttgatccaaaaggaggcctttgtaatgggact 4881
|| |||||||||||||| ||||| ||| | ||||| ||||| || ||||||||||| ||
Sbjct: 3826 ggggctcctgttatgttacttagaaatttagatcctaaaggtggtctttgtaatggaaca 3885
Query: 4882 aggctacagat 4892
|||||||||||
Sbjct: 3886 aggctacagat 3896
Score = 135 bits (68), Expect = 4e-30
Identities = 365/464 (78%)
Strand = Plus / Plus
Query: 3104 tggcttggttgactttgaataagaataatgatgttggaaaaaatggtaaacgtgctagag 3163
|||| ||||||||||||||| ||| |||| ||||||||| ||||| ||||||||| |||
Sbjct: 2108 tggcatggttgactttgaatcggaaaaatgctgttggaaagaatgggaaacgtgctcgag 2167
Query: 3164 aacttctatattctcaaatccctgcctattttacttgggatggaaagaataagcagtggg 3223
| ||||||| || ||||||| || |||||||| ||||||||| | || || || |
Sbjct: 2168 actgtctatatgctgaaatcccagcatattttacatgggatggagaaaacaaacaattta 2227
Query: 3224 ttaagagaattagaggattttctttgggtcgtattaactacgtgtgtaggaaaatggaag 3283
||||||| |||||| || ||||||||||||||||| ||||| | |||||||||||||
Sbjct: 2228 aaaagagaactagaggtttctctttgggtcgtattaattacgtttccaggaaaatggaag 2287
Query: 3284 ttgaatactatcttcgagtgcttctcaacatagtcaaagggcctatgagttatgatgaca 3343
||||| ||| | ||||| | || ||||| || | ||| || ||| || ||||| |
Sbjct: 2288 acgaatattatttgagagtgttacttaacattgtgagaggtccacagagctacgatgata 2347
Query: 3344 tcaagacatttaatggtgtcgtatatccatcattcaaagaagcatgttttgcaagaggaa 3403
| || ||| |||| ||||| || |||||||| | |||| ||| ||||||||| | ||||
Sbjct: 2348 taaaaacagttaacggtgttgtttatccatcttacaaactagcctgttttgcacgtggaa 2407
Query: 3404 ttctggatgatgatcaagtttatatagatggtctacatgaagccagtcagttctgttttg 3463
|||| ||||| || || |||||||| ||||| | |||||| |||||| |||||||
Sbjct: 2408 ttctagatgacgaccaggtttatatcaatggtttgattgaagcatctcagttttgttttg 2467
Query: 3464 gagattacttgagaaatttttttgctatgttgcttctatcagattctctcgcaagacccg 3523
||||||| |||||||||||||| | ||| || | || || |||||||| || ||||| |
Sbjct: 2468 gagattatttgagaaattttttctcaatgatgttgctgtctgattctcttgctagaccag 2527
Query: 3524 agcacgtatggtcagaaacatggcaccttttggcagaggatatt 3567
| || || ||||||||||| ||||| ||||| |||| ||||||
Sbjct: 2528 aacatgtttggtcagaaacttggcatcttttatcagaagatatt 2571
Score = 95.6 bits (48), Expect = 4e-18
Identities = 159/196 (81%)
Strand = Plus / Plus
Query: 1174 aatatgatttttgcaatgacttcacttggtggaagagttgataactctatgccaaaaggt 1233
|||||||||||||| |||||||| |||||||| | || || || |||||||| |||||
Sbjct: 181 aatatgatttttgctatgacttctcttggtggtaaggtggacaaatctatgcctaaaggg 240
Query: 1234 aaaggaccaaacatgtttagactacaaggaggaaactaccatttgattggcagcttgaag 1293
| |||||| |||||| | | ||||||||||||||||| ||||||||| || ||
Sbjct: 241 agaggacctgctatgtttcgtttgcaaggaggaaactaccaccagattggcagtttaaaa 300
Query: 1294 cctaatccgggtgattatgctaagtattcacaactttacatagttgatacagaaaacgaa 1353
|| || ||||||||||||||||||||||||||||| || || ||||| ||||| |||
Sbjct: 301 ccgaaagatggtgattatgctaagtattcacaactttatattgtggatactgaaaatgaa 360
Query: 1354 gttgataacagagcta 1369
||||| ||||| ||||
Sbjct: 361 gttgaaaacagggcta 376
Score = 93.7 bits (47), Expect = 1e-17
Identities = 95/111 (85%)
Strand = Plus / Plus
Query: 1891 tcaaagaggttatttcaacaatttctctgtgatgcttatacaactattgaatctaaccgg 1950
||||| ||||| |||||||| ||||| |||||||| ||||||||||||||||| ||| |
Sbjct: 895 tcaaaaaggttgtttcaacagtttctatgtgatgcatatacaactattgaatcaaacaga 954
Query: 1951 ctttcttatatcaagtttaaacaatcaaagctacgatgtgagaactacaac 2001
||| |||||||||| || || ||||| ||||| |||||||||||| ||||
Sbjct: 955 cttgcttatatcaaattcaatcaatctaagctgagatgtgagaacttcaac 1005
Score = 85.7 bits (43), Expect = 4e-15
Identities = 79/91 (86%)
Strand = Plus / Plus
Query: 1691 ggataagtcagattcatatctcctacttggcattgcaatatcctcttattttgtgctatg 1750
||||||||||||||||||| ||||| |||||| | ||||| || | ||||| |||||||
Sbjct: 698 ggataagtcagattcatatatcctatttggcactacaatacccattaattttttgctatg 757
Query: 1751 gcgaagatggttacactcctggtatagagaa 1781
| |||||||||||||||||||| || |||||
Sbjct: 758 gtgaagatggttacactcctggaattgagaa 788
Score = 83.8 bits (42), Expect = 1e-14
Identities = 120/146 (82%)
Strand = Plus / Plus
Query: 2887 gagaaaaaaaaggatgagatcaaagattggtttgactgcaggtacgtatccgcgtcggaa 2946
|||||||| |||||||| || || |||||||| || ||||| || ||||||||||| ||
Sbjct: 1891 gagaaaaagaaggatgaaataaaggattggttcgattgcagatatgtatccgcgtcagag 1950
Query: 2947 gctgtttggaggatttacaaatttccacttcaggatcgatctacagcagttcaaagacta 3006
||| | ||||| || | |||||||||| ||||| || |||| ||| | ||||| | ||||
Sbjct: 1951 gctatatggagaatattcaaatttccaattcagcatagatcaacacctgttcagaaacta 2010
Query: 3007 tctttccatgatgaagggaagcaacc 3032
||||| |||||| ||||||| |||||
Sbjct: 2011 tcttttcatgataaagggaaacaacc 2036
Score = 38.2 bits (19), Expect = 0.74
Identities = 37/43 (86%)
Strand = Plus / Plus
Query: 3698 attttccacagccttctagagaaggtattgataactccaaccg 3740
||||||| ||||||| ||||| ||||||||||| || |||||
Sbjct: 2702 attttcctaagccttcaagagagggtattgataattcaaaccg 2744
>At1g35940.1 68414.m04463 AT hook motif-containing protein-related very low
similarity to SP|Q9UUA2 DNA repair and recombination
protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; contains weak hit to
PF02178: AT hook motif
Length = 5037
Score = 283 bits (143), Expect = 7e-75
Identities = 445/543 (81%), Gaps = 2/543 (0%)
Strand = Plus / Plus
Query: 2263 aaaatcaagcttgattctctaatgaaagatttgacagatgggaaa-atgctgggaaagac 2321
|||||||| || |||||||||||||| ||||| || | || ||| ||||| || |||||
Sbjct: 2293 aaaatcaaactggattctctaatgaatgatttaactg-tgaaaaagatgcttgggaagac 2351
Query: 2322 agttgcctctatgcataccgttgaatttcagaaaagaggattaccccatgctcatatcct 2381
||||| || ||| |||| ||||| |||||||||||||| || || ||||| || || ||
Sbjct: 2352 tgttgcatcgatgtatactgttgagtttcagaaaagaggcttgcctcatgcacacattct 2411
Query: 2382 gttattcatggatgctaaaagtaagcttccaacagctgatgatatcgataagattatttc 2441
||||||||| ||||||| || || | |||||||| || || || ||||| |||||||
Sbjct: 2412 cttattcatgcatgctaagagcaaattaccaacagcagacgacattgataaacttatttc 2471
Query: 2442 tgcagagatcccagataaagataaagaacccgagctttatgaagtaatcaagaattcaat 2501
||| ||||| || || ||||| |||||||| || || || ||||| ||||| || || ||
Sbjct: 2472 tgctgagattcctgacaaagaaaaagaaccagatctatacgaagttatcaaaaactccat 2531
Query: 2502 gattcatggtccatgtggtgctgcaaatatgaattccccatgtatggttgaaggtaaatg 2561
|||||| |||||||||||| | |||||| | ||||| |||||||||||||| || ||||
Sbjct: 2532 gattcacggtccatgtggttcagcaaatgtcaattctccatgtatggttgatggagaatg 2591
Query: 2562 ttctaaacaatacccaaagaaacatcaggatattaccaaagttggtaaggatggttatcc 2621
|||||||| || || || |||||||| ||||| ||||| |||||| |||||||||||
Sbjct: 2592 ttctaaactttatcccaaaaaacatcaagatataaccaagattggtagtgatggttatcc 2651
Query: 2622 catctatcgaaggaggatgacagaagactatattgagaagggtggttttaaatgtgataa 2681
|| ||| |||| || | || || |||||| |||||||||||||| |||||||||| ||
Sbjct: 2652 tatttatagaagaagaaaaactgatgactatgttgagaagggtggtattaaatgtgacaa 2711
Query: 2682 tggttatgttgtcccttataataagaagctgtcacttcgatatcaagctcatatcaacgt 2741
| | |||||||| |||||||| |||||||| || ||||| ||| | ||||||||||| ||
Sbjct: 2712 taggtatgttgtgccttataacaagaagctttctcttcgttataatgctcatatcaatgt 2771
Query: 2742 ggaatggtgtaaccagagtggttctatcaaatacttatttaagtatatcaacaaaggagc 2801
|||||||||||||||| ||| || || ||||||||||| |||||||||||||||||| |
Sbjct: 2772 cgaatggtgtaaccagaatggctccattaaatacttattcaagtatatcaacaaaggacc 2831
Query: 2802 aga 2804
|||
Sbjct: 2832 aga 2834
Score = 264 bits (133), Expect = 7e-69
Identities = 421/517 (81%)
Strand = Plus / Plus
Query: 4743 caatcctgtaattactccagattttttgaacagtatacagctgacaggtatgcctcacca 4802
||||||||| || |||||||||||||| |||||||| || | ||||| ||||| ||||
Sbjct: 4521 caatcctgttatcactccagattttttaaacagtatcaagttaccaggtttgcctaacca 4580
Query: 4803 cgctttacggttgaaggttggtgctcctgttatgttgcttaggaatcttgatccaaaagg 4862
|||| | || ||||| ||||||||||||||||| || | ||| | ||||| |||||
Sbjct: 4581 ttctttgtgtttaaaggtcggtgctcctgttatgttactacgaaatttggatcctaaagg 4640
Query: 4863 aggcctttgtaatgggactaggctacagattacacaacttgccaaacaagttgttcaagc 4922
|| || || ||||| |||||||| |||||||| || || | || ||||| ||||
Sbjct: 4641 tggtctatgcaatggcactaggcttcagattacgcagctatgtactcagattgttgaagc 4700
Query: 4923 caaagtaataactcgagatagaattggtgacatcgtgttgattcctctaattaaccttac 4982
||||| || || |||| ||||||||| |||| || ||||||||| | | || |||||
Sbjct: 4701 taaagttattacaggagacagaattggtaacatagttttgattcctacagtgaatcttac 4760
Query: 4983 accttcagatacaaagctgccattcaagatgcgcagaaggcaatttccactgtcagttgc 5042
|||| |||| || || || |||||||||||||| ||||| || |||||||| || |||||
Sbjct: 4761 acctacagacaccaaacttccattcaagatgcgtagaagacagtttccactctctgttgc 4820
Query: 5043 ttttgctatgaccatcaataagagtcagggtcaatcactcgagcaagttggactctactt 5102
|| |||||||| || ||||||||||| |||||||| || || || | ||||| |||||
Sbjct: 4821 attcgctatgactataaataagagtcaaggtcaatctctagaacatataggactttactt 4880
Query: 5103 gcctaaacctgtattctcccatggccaactctatgttgctttgtccagggttacctccaa 5162
||| ||||| || ||||||||||| || || |||||||||||||| ||||||||||| ||
Sbjct: 4881 gcccaaaccagtgttctcccatggtcagctttatgttgctttgtctagggttacctctaa 4940
Query: 5163 aaaaggtttgaaaatcctaatactagacaaagacggaaacatgcaaaaacaaacaacaaa 5222
||| ||||||||||||||||||||||||||||| || || | || || |||||||| ||
Sbjct: 4941 aaagggtttgaaaatcctaatactagacaaagatggtaaacttcagaagcaaacaaccaa 5000
Query: 5223 cgttgttttcaaggaggttttccaaaacatagtttga 5259
||||||||||||||| |||||||||||||||| ||||
Sbjct: 5001 cgttgttttcaaggaagttttccaaaacatagattga 5037
Score = 159 bits (80), Expect = 3e-37
Identities = 182/216 (84%)
Strand = Plus / Plus
Query: 1174 aatatgatttttgcaatgacttcacttggtggaagagttgataactctatgccaaaaggt 1233
|||||| |||| |||||||| || ||||||| | ||| ||||| |||||||| ||||||
Sbjct: 1204 aatatggttttcgcaatgacctcctttggtggtaaagtagataaatctatgcctaaaggt 1263
Query: 1234 aaaggaccaaacatgtttagactacaaggaggaaactaccatttgattggcagcttgaag 1293
| ||| ||| |||||||||| | ||||| ||||| |||||||||||||| || || ||
Sbjct: 1264 agagggccagccatgtttagattgcaaggtggaaattaccatttgattggtagtttaaaa 1323
Query: 1294 cctaatccgggtgattatgctaagtattcacaactttacatagttgatacagaaaacgaa 1353
| || ||| || ||||| ||||||||||| ||||| ||||| ||||||| || ||||||
Sbjct: 1324 cttactcctggagattacgctaagtattcccaactatacattattgatactgagaacgaa 1383
Query: 1354 gttgataacagagctactgtcatcaacaagggaaaa 1389
||||| ||||||||||||||||||||||||||||||
Sbjct: 1384 gttgaaaacagagctactgtcatcaacaagggaaaa 1419
Score = 133 bits (67), Expect = 2e-29
Identities = 121/139 (87%)
Strand = Plus / Plus
Query: 4211 acaacaaagtttttggtggaaaggtagttgtttttggcggtgattttagacaagtacttc 4270
||||||| ||||||||||||||||| ||||||||||| |||||||| ||||| || ||||
Sbjct: 3989 acaacaaggtttttggtggaaaggttgttgtttttggtggtgatttcagacaggtgcttc 4048
Query: 4271 cggttattaatggtgcagggagagtagaaattgtgatgtcttcactcaatgcctcatacc 4330
| || ||||||||||||||||||| |||||| || ||||| || || ||||| || || |
Sbjct: 4049 cagtaattaatggtgcagggagagcagaaatagtaatgtcatcgcttaatgcttcgtatc 4108
Query: 4331 tttgggaccactgcaaggt 4349
||||||| |||||||||||
Sbjct: 4109 tttgggatcactgcaaggt 4127
Score = 119 bits (60), Expect = 3e-25
Identities = 174/212 (82%)
Strand = Plus / Plus
Query: 3859 gttttcaatgatttgggaggtgttttttttatttatggttttggaggaactggaaaaact 3918
||||| ||| |||| || || ||||||||| | || ||||||||||| || || || |||
Sbjct: 3736 gtttttaataatttaggtggagttttttttgtgtacggttttggaggtacagggaagact 3795
Query: 3919 tttatctggaagacattagcagctgctgttagatctagaggacagattgtgcttaatgta 3978
||||| ||||| || | | |||||| |||||| |||||| ||||| || ||||| ||
Sbjct: 3796 tttatttggaaaactctgtctgctgctattagatgtagaggtcagatagttcttaacgtc 3855
Query: 3979 gcctccagcggcattgcgtctttgttgttagaaggtggacggacagcacattcaaggttt 4038
||||| || |||||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 3856 gcctctagtggcattgcctctttgttgttagaaggtggtcggactgcacattcaaggttt 3915
Query: 4039 gctatcccactaaatcctgacgagttttctgt 4070
| ||| ||| | |||| ||| ||||| |||||
Sbjct: 3916 ggtattccattgaatcatgatgagttctctgt 3947
Score = 111 bits (56), Expect = 6e-23
Identities = 245/308 (79%)
Strand = Plus / Plus
Query: 1891 tcaaagaggttatttcaacaatttctctgtgatgcttatacaactattgaatctaaccgg 1950
||||||||||| || || || | |||||||||||||||||| ||||||||||||||| |
Sbjct: 1921 tcaaagaggttgttccagcagtgtctctgtgatgcttataccactattgaatctaacaga 1980
Query: 1951 ctttcttatatcaagtttaaacaatcaaagctacgatgtgagaactacaacagtttgaaa 2010
| |||||||||||||| || || || || |||||||| ||||||| | | |||
Sbjct: 1981 ttaaactatatcaagtttaatcagtcgaaacttcgatgtgaaaactacacatctgtaaaa 2040
Query: 2011 aaggcctctgaagctggaactacctctatgaatgaagaaggtaaccaggttttaattcca 2070
| || ||| ||||||| | ||| ||||| | |||||||||||||| | | ||||||
Sbjct: 2041 gaagcagctgcagctggagcaaccactatggaagaagaaggtaaccaactactgattcca 2100
Query: 2071 tcttccctcactggaggaccacgctatatggtccagaactactatgatgcaatggccatc 2130
|||| ||||||| || || | |||||||| || | |||||||||||||||||| |||
Sbjct: 2101 gcttcattcactggtggtcctagatatatggttcaaagctactatgatgcaatggctatc 2160
Query: 2131 tgcaagcattacggtttccctgaccttttcataacctttacatgtaatccaaagtggcct 2190
|| || ||||| ||||| || || |||||||| || ||||| ||||| |||||||||||
Sbjct: 2161 tgtaaacattatggttttccagatcttttcatcacttttacctgtaacccaaagtggcca 2220
Query: 2191 gagataac 2198
||||||||
Sbjct: 2221 gagataac 2228
Score = 85.7 bits (43), Expect = 4e-15
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 4402 gaagctaaagagatacaacagttttctgattggttattggctgtcggtgatggtaggatt 4461
||||||||||| || ||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 4180 gaagctaaagaaattcaagagttttctgattggttattggctgttagtgatggtaggata 4239
Query: 4462 aatgagcctaa 4472
|| ||||||||
Sbjct: 4240 aacgagcctaa 4250
Score = 60.0 bits (30), Expect = 2e-07
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 2885 ctgagaaaaaaaaggatgagatcaaagattggtttgactgcaggtacgtatccgcgtcgg 2944
||||||| || ||| | ||||||||||||||||| || ||||| || || ||||| || |
Sbjct: 2915 ctgagaagaagaagaacgagatcaaagattggttcgattgcagatatgtttccgcatctg 2974
Query: 2945 aagctgtttggaggattt 2962
||||||||||||| ||||
Sbjct: 2975 aagctgtttggagaattt 2992
Score = 54.0 bits (27), Expect = 1e-05
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 3376 ttcaaagaagcatgttttgcaagaggaattctggatgatgatcaagtttatatagatgg 3434
||||||||||||||||||||| | || ||||| || |||||||| |||| ||| |||||
Sbjct: 3406 ttcaaagaagcatgttttgcacgtggtattcttgacgatgatcaggtttttattgatgg 3464
Score = 50.1 bits (25), Expect = 2e-04
Identities = 64/77 (83%)
Strand = Plus / Plus
Query: 1531 tttcacatgcggattgttgcagatcgaaagggtgttgataggaggacatacagtatgcct 1590
||||||||||| ||| | |||||||| | |||||||| | |||||||| |||||||||
Sbjct: 1561 tttcacatgcgtattatcgcagatcgtcaaggtgttgagggcaggacatatagtatgcct 1620
Query: 1591 acatcatctgaggttgc 1607
|| |||| ||||||||
Sbjct: 1621 accacatcagaggttgc 1637
Score = 46.1 bits (23), Expect = 0.003
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 3130 aatgatgttggaaaaaatggtaaacgtgctagaga 3164
|||| |||||||||||||||||| || ||||||||
Sbjct: 3160 aatgctgttggaaaaaatggtaagcgagctagaga 3194
Score = 44.1 bits (22), Expect = 0.012
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 1699 cagattcatatctcctacttggcattgcaatatcctcttattttgtgctatggcgaagat 1758
|||||||| || ||||| ||||| |||||||||| || || || || ||||||||||||
Sbjct: 1729 cagattcacatttcctatttggctctgcaatatccactaatattttgttatggcgaagat 1788
Query: 1759 gg 1760
||
Sbjct: 1789 gg 1790
Score = 38.2 bits (19), Expect = 0.74
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 3533 ggtcagaaacatggcaccttttggcagaggatatt 3567
||||| |||| ||||| ||||| ||||||||||||
Sbjct: 3488 ggtcacaaacgtggcatcttttagcagaggatatt 3522
>At5g34960.1 68418.m04125 hypothetical protein includes At5g34960, At2g14450,
At1g35920
Length = 3102
Score = 238 bits (120), Expect = 4e-61
Identities = 414/512 (80%)
Strand = Plus / Plus
Query: 4743 caatcctgtaattactccagattttttgaacagtatacagctgacaggtatgcctcacca 4802
||||||||| || |||||||||||||| |||||||| || | ||||| ||||| ||||
Sbjct: 2586 caatcctgttatcactccagattttttaaacagtatcaagttagcaggtttgcctaacca 2645
Query: 4803 cgctttacggttgaaggttggtgctcctgttatgttgcttaggaatcttgatccaaaagg 4862
|||| || || ||||| |||||||||||||||| || | ||| | ||||| |||||
Sbjct: 2646 ttctttgcgtttaaaggtcagtgctcctgttatgttactacgaaatttggatcctaaagg 2705
Query: 4863 aggcctttgtaatgggactaggctacagattacacaacttgccaaacaagttgttcaagc 4922
|| || || ||||| |||||||| |||||||| || || | || ||||| ||||
Sbjct: 2706 tggtctatgcaatggcactaggcttcagattacgcagctatgtactcagattgttgaagc 2765
Query: 4923 caaagtaataactcgagatagaattggtgacatcgtgttgattcctctaattaaccttac 4982
||||| || || |||| | ||||||| |||| || ||||||||| | | || |||||
Sbjct: 2766 taaagttattacaggagacataattggtcacatagttttgattcctacagtgaatcttac 2825
Query: 4983 accttcagatacaaagctgccattcaagatgcgcagaaggcaatttccactgtcagttgc 5042
|||| |||| || || || |||||||||||||| ||||| || |||||||| || |||||
Sbjct: 2826 acctacagacactaaacttccattcaagatgcgtagaagacagtttccactctctgttgc 2885
Query: 5043 ttttgctatgaccatcaataagagtcagggtcaatcactcgagcaagttggactctactt 5102
|| |||||||| || |||| |||||| |||||||| || || || || ||||| |||||
Sbjct: 2886 attcgctatgactataaatacgagtcaaggtcaatctctagaacatgtaggactttactt 2945
Query: 5103 gcctaaacctgtattctcccatggccaactctatgttgctttgtccagggttacctccaa 5162
||| ||| | || ||||||||||| || || |||||||||||||| ||||||||||| ||
Sbjct: 2946 gcccaaagcagtgttctcccatggtcagctttatgttgctttgtctagggttacctctaa 3005
Query: 5163 aaaaggtttgaaaatcctaatactagacaaagacggaaacatgcaaaaacaaacaacaaa 5222
||| ||||||||| ||||||||||||||||||| || || | || || |||||||| ||
Sbjct: 3006 aaagggtttgaaattcctaatactagacaaagatggtaaacttcagaagcaaacaaccaa 3065
Query: 5223 cgttgttttcaaggaggttttccaaaacatag 5254
||||||||||||||| ||||||||||||||||
Sbjct: 3066 cgttgttttcaaggaagttttccaaaacatag 3097
Score = 159 bits (80), Expect = 3e-37
Identities = 167/196 (85%)
Strand = Plus / Plus
Query: 3961 cagattgtgcttaatgtagcctccagcggcattgcgtctttgttgttagaaggtggacgg 4020
|||||||| ||||| || |||||||| |||||||| |||||||||||||||||||| |||
Sbjct: 2008 cagattgttcttaacgtcgcctccagtggcattgcctctttgttgttagaaggtggtcgg 2067
Query: 4021 acagcacattcaaggtttgctatcccactaaatcctgacgagttttctgtttgcaagatc 4080
|| |||||||||||||||| ||| || | |||||||| ||||| ||||| || |||||
Sbjct: 2068 actgcacattcaaggtttggtatttcattgaatcctgatgagttctctgtatgtaagata 2127
Query: 4081 acaccaaaatctgatcttgctaatttgattaaagaagcatctcttattatttgggatgaa 4140
| |||||| |||||| | || |||||| |||||||||| ||| | |||| |||||||||
Sbjct: 2128 aaaccaaagtctgatttggcaaatttggttaaagaagcgtctttagttatatgggatgaa 2187
Query: 4141 gcgccaatgatgagca 4156
|| |||||||||||||
Sbjct: 2188 gcaccaatgatgagca 2203
Score = 67.9 bits (34), Expect = 8e-10
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 4276 attaatggtgcagggagagtagaaattgtgatgtcttcactcaatgcctcatacctttgg 4335
||||||||||||||||||| |||||| || ||||| || || ||||| || || ||||||
Sbjct: 2221 attaatggtgcagggagagcagaaatagtaatgtcatcgcttaatgcttcgtatctttgg 2280
Query: 4336 gaccactgcaaggt 4349
|| |||||||||||
Sbjct: 2281 gatcactgcaaggt 2294
Score = 40.1 bits (20), Expect = 0.19
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 4612 agagctattttagcaccaaccaatgaagacgt 4643
|||||||| ||||||||||| ||||| |||||
Sbjct: 2455 agagctatattagcaccaacgaatgaggacgt 2486
Score = 38.2 bits (19), Expect = 0.74
Identities = 46/55 (83%)
Strand = Plus / Plus
Query: 4462 aatgagcctaatgatggagaggcacttattgatattccagaggaattgttgatta 4516
|||||||||||||| || | ||| | || ||||||||||| || ||||||||||
Sbjct: 2305 aatgagcctaatgacggtgtggctataatagatattccagaagatttgttgatta 2359
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 177,166
Number of Sequences: 29161
Number of extensions: 177166
Number of successful extensions: 4413
Number of sequences better than 10.0: 59
length of query: 5259
length of database: 44,058,232
effective HSP length: 19
effective length of query: 5240
effective length of database: 43,504,173
effective search space: 227961866520
effective search space used: 227961866520
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)