BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01740.F
(1452 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01740.1 68414.m00093 protein kinase family protein low ... 2878 0.0
At4g00710.1 68417.m00097 protein kinase family protein low ... 636 0.0
At5g41260.1 68418.m05015 protein kinase family protein cont... 74 4e-12
At4g35230.1 68417.m05007 protein kinase family protein cont... 70 6e-11
At5g01060.1 68418.m00009 protein kinase family protein cont... 60 6e-08
>At1g01740.1 68414.m00093 protein kinase family protein low similarity to protein
kinase [Arabidopsis thaliana] GI:2852449; contains Pfam
profile: PF00069 Protein kinase domain
Length = 1452
Score = 2878 bits (1452), Expect = 0.0
Identities = 1452/1452 (100%)
Strand = Plus / Plus
Query: 1 atgggaggtcaaagctcaaagattggtacatgttgttcacacaagactactgctcttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgggaggtcaaagctcaaagattggtacatgttgttcacacaagactactgctcttgaa 60
Query: 61 gctccagatgttgaaaacaaagagaatggtgaggtaaacggtgtgcattcttttcgtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctccagatgttgaaaacaaagagaatggtgaggtaaacggtgtgcattcttttcgtgaa 120
Query: 121 tactcactagaacagcttaagatcgccacctcttgttttgctttggagaatgttgtatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactcactagaacagcttaagatcgccacctcttgttttgctttggagaatgttgtatct 180
Query: 181 gaacatggagaaacagctccaaatgttgtctatcaagggaaattggagaatcatatgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaacatggagaaacagctccaaatgttgtctatcaagggaaattggagaatcatatgaag 240
Query: 241 attgctatcaagcgcttttctggaactgcctggcctgatcctcgccaattcctggaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attgctatcaagcgcttttctggaactgcctggcctgatcctcgccaattcctggaagaa 300
Query: 301 gcaagattggttggtcagctacgcagcaaaagaatggccaatttactcggttattgctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcaagattggttggtcagctacgcagcaaaagaatggccaatttactcggttattgctgt 360
Query: 361 gaaggcggcgagaggttacttgtggctgagtttatgcctaatgagacactagccaaacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaggcggcgagaggttacttgtggctgagtttatgcctaatgagacactagccaaacac 420
Query: 421 cttttccactgggatacagagccaatgaaatgggcgatgcgactaagggttgctctatac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttttccactgggatacagagccaatgaaatgggcgatgcgactaagggttgctctatac 480
Query: 481 atttcagaagctcttgaatactgtagtaacaatggacacacgctatatcatgatctcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atttcagaagctcttgaatactgtagtaacaatggacacacgctatatcatgatctcaat 540
Query: 541 gcttacagagttttatttgacgaggaatgtaatccaagactttcaacatttgggttaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcttacagagttttatttgacgaggaatgtaatccaagactttcaacatttgggttaatg 600
Query: 601 aagaatagtcgggatgggaaaagttatagcacaaatcttgcttttaccccacctgagtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagaatagtcgggatgggaaaagttatagcacaaatcttgcttttaccccacctgagtat 660
Query: 661 ctacgaactgggagaatcacagcagagagtgtgatttacagttttggcactcttctgctt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctacgaactgggagaatcacagcagagagtgtgatttacagttttggcactcttctgctt 720
Query: 721 gatcttctcaccggaaagcatattcctcctagccatgcccttgatttgattcgagacaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gatcttctcaccggaaagcatattcctcctagccatgcccttgatttgattcgagacaga 780
Query: 781 aatcttcagactctaaccgattcctgcttggagggacaattttcagacagtgatggtacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aatcttcagactctaaccgattcctgcttggagggacaattttcagacagtgatggtacg 840
Query: 841 gagttagtacgcctgacatcttgttgtcttcagtatgaagctcgtgagcgaccaaacata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gagttagtacgcctgacatcttgttgtcttcagtatgaagctcgtgagcgaccaaacata 900
Query: 901 aaatctttggtcactgcactgatatctctccagaaagacacagaggttctgtctcatgtt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aaatctttggtcactgcactgatatctctccagaaagacacagaggttctgtctcatgtt 960
Query: 961 ctaatgggtctgcctcaaagtggtacttttgcgtcacctccgtctccttttgctgaggct 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctaatgggtctgcctcaaagtggtacttttgcgtcacctccgtctccttttgctgaggct 1020
Query: 1021 tgctcgggaaaagacctgacgtctatggttgagatcttggaaaaaattggttacaaagac 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tgctcgggaaaagacctgacgtctatggttgagatcttggaaaaaattggttacaaagac 1080
Query: 1081 gatgaagatctttcgtttatgtggacggaacagatgcaagaagctataaactcgaagaaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gatgaagatctttcgtttatgtggacggaacagatgcaagaagctataaactcgaagaaa 1140
Query: 1141 aaaggtgatattgcatttagaagaaaagactttagtgaagccattgagttttacacgcag 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaaggtgatattgcatttagaagaaaagactttagtgaagccattgagttttacacgcag 1200
Query: 1201 tttcttgatttgggaatgatctctgcaacagtcttggtgcggcgaagtcaaagttaccta 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tttcttgatttgggaatgatctctgcaacagtcttggtgcggcgaagtcaaagttaccta 1260
Query: 1261 atgagtaacatggcgaaagaagctttagatgatgcaatgaaggctcaaggcatttctcct 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 atgagtaacatggcgaaagaagctttagatgatgcaatgaaggctcaaggcatttctcct 1320
Query: 1321 gtttggtatgttgcattgtatctccagtctgctgctctttctgtcctgggaatggagaag 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gtttggtatgttgcattgtatctccagtctgctgctctttctgtcctgggaatggagaag 1380
Query: 1381 gaatctcaaatcgcacttaccgaaggatccattcttgaagccagaaagatttcagcttcc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gaatctcaaatcgcacttaccgaaggatccattcttgaagccagaaagatttcagcttcc 1440
Query: 1441 acacagaactaa 1452
||||||||||||
Sbjct: 1441 acacagaactaa 1452
>At4g00710.1 68417.m00097 protein kinase family protein low similarity to protein
kinase [Arabidopsis thaliana] GI:2852449; contains Pfam
profile: PF00069 Protein kinase domain
Length = 2495
Score = 636 bits (321), Expect = 0.0
Identities = 797/955 (83%), Gaps = 3/955 (0%)
Strand = Plus / Plus
Query: 128 tagaacagcttaagatcgccacctcttgttttgctttggagaatgttgtatctgaacatg 187
|||||||||||||| || || ||| ||||||| ||||| || |||||||||||||||
Sbjct: 802 tagaacagcttaaggcagctacttctggttttgccgtggagtatattgtatctgaacatg 861
Query: 188 gagaaacagctccaaatgttgtctatcaagggaaattggagaatcatatgaagattgcta 247
|||||| |||||||||||||||||| |||||||||||||||| || | ||||||||||
Sbjct: 862 gagaaaaggctccaaatgttgtctataaagggaaattggagaaccaaaagaagattgctg 921
Query: 248 tcaagcgcttttctggaactgcctggcctgatcctcgccaattcctggaagaagcaagat 307
||||||| ||| || ||| |||||||||||| | || || ||| |||| ||||| || |
Sbjct: 922 tcaagcgttttactagaatggcctggcctgattcacgacagttcttggaggaagcgaggt 981
Query: 308 tggttggtcagctacgcagcaaaagaatggccaatttactcggttattgctgtgaaggcg 367
||||||||||||||| || | |||||||||||||||||||| | |||||| ||||| |
Sbjct: 982 cggttggtcagctacggagtgagagaatggccaatttactcggatgttgctgcgaaggtg 1041
Query: 368 gcgagaggttacttgtggctgagtttatgcctaatgagacactagccaaacaccttttcc 427
||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| |
Sbjct: 1042 acgagaggttacttgtagcagagtttatgcctaatgaaacactagccaaacacctttttc 1101
Query: 428 actgggatacagagccaatgaaatgggcgatgcgactaagggttgctctatacatttcag 487
||||||| || | || ||||||||| | ||| | ||| | |||| | |||| | ||
Sbjct: 1102 actgggaaactcaacctatgaaatggactatgaggctacgagttgttttatatctagcac 1161
Query: 488 aagctcttgaatactgtagtaacaatggacacacgctatatcatgatctcaatgcttaca 547
|||||||||||||||| | | ||| || | || || || || || ||||||||||||
Sbjct: 1162 aagctcttgaatactgcaccagcaaaggccgtactctttaccacgacctcaatgcttacc 1221
Query: 548 gagttttatttgacgaggaatgtaatccaagactttcaacatttgggttaatgaagaata 607
| ||||| ||||| |||||||| ||||||||||| || || ||||| || ||||||||||
Sbjct: 1222 gggttttgtttgatgaggaatgcaatccaagactatctacttttggcttgatgaagaata 1281
Query: 608 gtcgggatgggaaaagttatagcacaaatcttgcttttaccccacctgagtatctacgaa 667
|||||||||| |||||||| ||||| ||||||||||| ||||| ||||| ||||||||||
Sbjct: 1282 gtcgggatggaaaaagttacagcactaatcttgctttcacccctcctgaatatctacgaa 1341
Query: 668 ctgggagaatcacagcagagagtgtgatttacagttttggcactcttctgcttgatcttc 727
|||||||||| || |||||||||| || ||||| |||||||||||||||||||||||||
Sbjct: 1342 ctgggagaattactccagagagtgtaatatacagctttggcactcttctgcttgatcttc 1401
Query: 728 tcaccggaaagcatattcctcctagccatgcccttgatttgattcgagacagaaatcttc 787
||| |||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||| |
Sbjct: 1402 tcagcggaaaacatatacctcctagccatgcccttgatctgattagagacagaaatctcc 1461
Query: 788 agactctaaccgattcctgcttggagggacaattttcagacagtgatggtacggagttag 847
|||| ||||| ||||| ||| | || || || ||||| || ||||||||||| ||| |||
Sbjct: 1462 agacgctaactgattcttgcctagatgggcagttttctgatagtgatggtacagagctag 1521
Query: 848 tacgcctgacatcttgttgtcttcagtatgaagctcgtgagcgaccaaacataaaatctt 907
||||||| | ||| |||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 1522 tacgcctagcttctcgttgtcttcagtatgaagctcgtgagcggccaaacaccaaatctt 1581
Query: 908 tggtcactgcactgatatctctccagaaagacacagaggttctgtctcatgttctaatgg 967
| || ||||| ||| | |||| ||||| || |||||||| |||||||||||||||||||
Sbjct: 1582 tagtgactgccttgacacctcttcagaaggagacagaggtcctgtctcatgttctaatgg 1641
Query: 968 gtctgcctcaaagtggtacttttgcgtcacctccgtctccttttgctgaggcttgctcgg 1027
|||| ||||| |||||| | | || |||| ||| ||| ||| ||||||||| ||
Sbjct: 1642 gtctacctcacagtggttcagtc---tctcctctgtcccctcttggtgaggcttgttcaa 1698
Query: 1028 gaaaagacctgacgtctatggttgagatcttggaaaaaattggttacaaagacga 1082
||| |||||||| ||||| |||||||| |||| ||| |||| |||||||||||
Sbjct: 1699 gaagggacctgaccgctatgcttgagatcctggagaaacttggatacaaagacga 1753
Score = 174 bits (88), Expect = 1e-42
Identities = 247/300 (82%)
Strand = Plus / Plus
Query: 1098 tatgtggacggaacagatgcaagaagctataaactcgaagaaaaaaggtgatattgcatt 1157
||||||||| || ||||||||||| || | ||||||||||| || |||||| | || ||
Sbjct: 1784 tatgtggacagaccagatgcaagagtctttgaactcgaagaagaagggtgatgtggcttt 1843
Query: 1158 tagaagaaaagactttagtgaagccattgagttttacacgcagtttcttgatttgggaat 1217
|| |||||||||||| || ||||| |||| |||||| |||||| ||||| |||||
Sbjct: 1844 caggcaaaaagactttagagaggccatcgagtgttacacacagtttattgatggaggaat 1903
Query: 1218 gatctctgcaacagtcttggtgcggcgaagtcaaagttacctaatgagtaacatggcgaa 1277
||||||| ||||||| | | ||||| |||| |||||||||||||| ||||| ||||
Sbjct: 1904 gatctctccaacagtgtgtgctcggcgtagtctgtgttacctaatgagtgacatgccgaa 1963
Query: 1278 agaagctttagatgatgcaatgaaggctcaaggcatttctcctgtttggtatgttgcatt 1337
||||||||||||||||||||| ||||||||| || ||||| || ||| |||| ||||
Sbjct: 1964 agaagctttagatgatgcaattcaggctcaagtgatctctcccgtgtggcatgtcgcatc 2023
Query: 1338 gtatctccagtctgctgctctttctgtcctgggaatggagaaggaatctcaaatcgcact 1397
||||| ||||||||| | ||| | ||||||||||||||||||||||||||||||||||
Sbjct: 2024 atatctgcagtctgcttcccttggtatcctgggaatggagaaggaatctcaaatcgcact 2083
Score = 46.1 bits (23), Expect = 8e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 36 ttcacacaagactactgctcttgaagctccagatgttga 74
|||||||||||| ||| |||||||||||| ||||||||
Sbjct: 710 ttcacacaagacagctgttcttgaagctcctgatgttga 748
>At5g41260.1 68418.m05015 protein kinase family protein contains protein kinase
domain, Pfam:PF00069
Length = 2054
Score = 73.8 bits (37), Expect = 4e-12
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 388 gagtttatgcctaatgagacactagccaaacaccttttccactgggatacagagccaatg 447
||||||||||||||||| || | || ||||| |||||||||||||| || ||||||||
Sbjct: 482 gagtttatgcctaatgaaactttggcaaaacatcttttccactgggagtcacagccaatg 541
Query: 448 aaatgggcgatgcgact 464
|| ||||||||||||||
Sbjct: 542 aagtgggcgatgcgact 558
Score = 38.2 bits (19), Expect = 0.20
Identities = 58/71 (81%)
Strand = Plus / Plus
Query: 688 agtgtgatttacagttttggcactcttctgcttgatcttctcaccggaaagcatattcct 747
||||| || ||||| ||||| ||||| | ||||| ||||| | ||||||||||| |||
Sbjct: 782 agtgtaatatacagctttggaactctattacttgaccttctgagtggaaagcatatacct 841
Query: 748 cctagccatgc 758
|| ||||||||
Sbjct: 842 ccaagccatgc 852
Score = 36.2 bits (18), Expect = 0.80
Identities = 51/62 (82%)
Strand = Plus / Plus
Query: 571 aatccaagactttcaacatttgggttaatgaagaatagtcgggatgggaaaagttatagc 630
||||||||||||||| ||||| || ||||| || ||| | ||||| || |||||||||
Sbjct: 665 aatccaagactttcatgctttggtttgatgaaaaacagtagagatggaaagagttatagc 724
Query: 631 ac 632
||
Sbjct: 725 ac 726
>At4g35230.1 68417.m05007 protein kinase family protein contains protein kinase
domain, Pfam:PF00069
Length = 1796
Score = 69.9 bits (35), Expect = 6e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 589 tttgggttaatgaagaatagtcgggatgggaaaagttatagcacaaatcttgcttttacc 648
||||| || |||||||| ||| ||||||| |||||||||||||||||| | |||| |||
Sbjct: 699 tttggcttgatgaagaacagtagggatggtaaaagttatagcacaaatttagcttataca 758
Query: 649 ccacctgagtatcta 663
|||||||| ||||||
Sbjct: 759 ccacctgaatatcta 773
Score = 38.2 bits (19), Expect = 0.20
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 370 gagaggttacttgtggctgagtttatgcctaatga 404
|||||| | ||||| |||||||| |||||||||||
Sbjct: 480 gagaggcttcttgttgctgagttcatgcctaatga 514
>At5g01060.1 68418.m00009 protein kinase family protein contains eukaryotic
protein kinase domain, INTERPRO:IPR000719
Length = 1500
Score = 60.0 bits (30), Expect = 6e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 369 cgagaggttacttgtggctgagtttatgcctaatgagacactagccaaacaccttttcca 428
|||||| |||||||| ||||||| ||||||||||| ||| |||| ||||| ||||| ||
Sbjct: 390 cgagagattacttgttgctgagtatatgcctaatggaacattagcaaaacatctttttca 449
Query: 429 ctggga 434
||||||
Sbjct: 450 ctggga 455
Score = 36.2 bits (18), Expect = 0.80
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 739 catattcctcctagccatgcccttgatttg 768
||||||||||| | |||||| |||||||||
Sbjct: 760 catattcctccaaaccatgcacttgatttg 789
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 49,599
Number of Sequences: 29161
Number of extensions: 49599
Number of successful extensions: 1179
Number of sequences better than 10.0: 35
length of query: 1452
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1434
effective length of database: 43,533,334
effective search space: 62426800956
effective search space used: 62426800956
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)