BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01560.F
(1110 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01560.1 68414.m00073 mitogen-activated protein kinase, ... 1516 0.0
At4g01370.1 68417.m00177 mitogen-activated protein kinase, ... 963 0.0
At2g46070.1 68415.m05731 mitogen-activated protein kinase, ... 182 4e-45
At4g11330.1 68417.m01829 mitogen-activated protein kinase, ... 80 5e-14
At1g10210.1 68414.m01151 mitogen-activated protein kinase, ... 58 2e-07
>At1g01560.1 68414.m00073 mitogen-activated protein kinase, putative / MAPK,
putative (MPK11) similar to MAP kinase 5 GI:4239889 from
[Zea mays]; mitogen-activated protein kinase
(MAPK)(AtMPK11), PMID:12119167
Length = 1579
Score = 1517 bits (765), Expect = 0.0
Identities = 765/765 (100%)
Strand = Plus / Plus
Query: 1 atgtcaatagagaaaccattcttcggtgatgacagcaacagaggagtaagtatcaatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 atgtcaatagagaaaccattcttcggtgatgacagcaacagaggagtaagtatcaatggt 138
Query: 61 ggtcgttatgtgcagtataatgtctatggaaatctctttgaagtttctaaaaagtatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ggtcgttatgtgcagtataatgtctatggaaatctctttgaagtttctaaaaagtatgtt 198
Query: 121 cctcctcttcgtcctatcggcagaggcgcttctggcatcgtctgtgctgcatggaattcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 cctcctcttcgtcctatcggcagaggcgcttctggcatcgtctgtgctgcatggaattcg 258
Query: 181 gagacgggtgaggaagtagcgatcaagaagattggtaatgcatttggcaacattatcgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gagacgggtgaggaagtagcgatcaagaagattggtaatgcatttggcaacattatcgac 318
Query: 241 gctaagagaactttgagagagattaagcttcttaagcatatggatcatgacaatgtcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gctaagagaactttgagagagattaagcttcttaagcatatggatcatgacaatgtcatt 378
Query: 301 gccattatagacataataagaccacctcagccagacaacttcaatgatgttcacattgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gccattatagacataataagaccacctcagccagacaacttcaatgatgttcacattgtc 438
Query: 361 tatgagttaatggacactgatcttcaccacattatccgctctaaccaaccgttaactgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tatgagttaatggacactgatcttcaccacattatccgctctaaccaaccgttaactgat 498
Query: 421 gatcattcacggttcttcctgtatcagttgttgcgaggcctcaagtatgtgcattcagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gatcattcacggttcttcctgtatcagttgttgcgaggcctcaagtatgtgcattcagcc 558
Query: 481 aatgtactgcatcgtgatttaaaaccgagtaacttgctcctgaatgcaaactgtgacctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aatgtactgcatcgtgatttaaaaccgagtaacttgctcctgaatgcaaactgtgacctc 618
Query: 541 aagattggggattttgggcttgcgaggactaaatcagagacagacttcatgacagaatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aagattggggattttgggcttgcgaggactaaatcagagacagacttcatgacagaatat 678
Query: 601 gttgttacacgttggtaccgagctccagagttgctccttaattgctcagaatacactgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gttgttacacgttggtaccgagctccagagttgctccttaattgctcagaatacactgca 738
Query: 661 gctatcgacatttggtctgtcggttgtatactcggtgaaataatgacgcgggagccgtta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gctatcgacatttggtctgtcggttgtatactcggtgaaataatgacgcgggagccgtta 798
Query: 721 tttccgggcagagattatgttcagcagcttagactcatcactgag 765
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tttccgggcagagattatgttcagcagcttagactcatcactgag 843
Score = 369 bits (186), Expect = e-101
Identities = 186/186 (100%)
Strand = Plus / Plus
Query: 764 agcttataggctcaccagatgattcaagcctaggattcttaagaagcgacaacgctagaa 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 agcttataggctcaccagatgattcaagcctaggattcttaagaagcgacaacgctagaa 1061
Query: 824 gatacgtaagacagcttccacagtatccaagacaaaactttgccgctagattcccaaaca 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 gatacgtaagacagcttccacagtatccaagacaaaactttgccgctagattcccaaaca 1121
Query: 884 tgtcggtcaatgctgttgatttgctgcagaaaatgctcgtctttgacccaaacagacgca 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 tgtcggtcaatgctgttgatttgctgcagaaaatgctcgtctttgacccaaacagacgca 1181
Query: 944 ttacag 949
||||||
Sbjct: 1182 ttacag 1187
Score = 325 bits (164), Expect = 5e-88
Identities = 164/164 (100%)
Strand = Plus / Plus
Query: 947 cagtcgatgaagccttgtgccacccttacttagcaccgctacacgaatataacgaggaac 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1270 cagtcgatgaagccttgtgccacccttacttagcaccgctacacgaatataacgaggaac 1329
Query: 1007 ctgtgtgtgtgagaccgttccattttgatttcgagcaaccttcattgacggaagagaaca 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1330 ctgtgtgtgtgagaccgttccattttgatttcgagcaaccttcattgacggaagagaaca 1389
Query: 1067 tcaaggagcttatatatcgtgaatcagtcaagtttaacccttaa 1110
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1390 tcaaggagcttatatatcgtgaatcagtcaagtttaacccttaa 1433
>At4g01370.1 68417.m00177 mitogen-activated protein kinase, putative / MAPK,
putative (MPK4) identical to mitogen-activated protein
kinase homolog (AtMPK4)[Arabidopsis thaliana]
SWISS-PROT:Q39024; PMID:12119167
Length = 1451
Score = 963 bits (486), Expect = 0.0
Identities = 908/1046 (86%), Gaps = 2/1046 (0%)
Strand = Plus / Plus
Query: 56 atggtggtcgttatgtgcagtataatgtctatggaaatctctttgaagtttctaaaaagt 115
|||||||| | ||||| ||||||||||||||||| |||||||| |||||||||| |||||
Sbjct: 189 atggtggtagctatgttcagtataatgtctatggcaatctcttcgaagtttctagaaagt 248
Query: 116 atgttcctcctcttcgtcctatcggcagaggcgcttctggcatcgtctgtgctgcatgga 175
||||||||||||||||||||||||| |||||||||| ||| || ||||||||||| |
Sbjct: 249 atgttcctcctcttcgtcctatcggtagaggcgcttatggaattgtctgtgctgctacaa 308
Query: 176 attcggagacgggtgaggaagtagcgatcaagaagattggtaatgcatttggcaacatta 235
| || ||||| || ||||| ||||| |||||||||||||||||||| |||| ||| ||||
Sbjct: 309 actcagagactggagaggaggtagctatcaagaagattggtaatgcttttgacaatatta 368
Query: 236 tcgacgctaagagaactttgagagagattaagcttcttaagcatatggatcatgacaatg 295
|||| ||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 369 tcgatgctaaaaggactttgagagagattaagcttctcaagcatatggatcatgaaaatg 428
Query: 296 tcattgccattatagacataataagaccacctcagccagacaacttcaatgatgttcaca 355
| ||||| | | || ||||||| |||||| ||| ||| ||||||||||||||| |||
Sbjct: 429 tgattgctgtaaaggatataataaaaccaccgcagagagagaacttcaatgatgtttaca 488
Query: 356 ttgtctatgagttaatggacactgatcttcaccacattatccgctctaaccaaccgttaa 415
|||| |||||| | |||||||||||||| ||||| ||||| |||||||||||||| ||||
Sbjct: 489 ttgtttatgagcttatggacactgatctccaccaaattattcgctctaaccaacccttaa 548
Query: 416 ctgatgatcattcacggttcttcctgtatcagttgttgcgaggcctcaagtatgtgcatt 475
|||||||||||| ||||| || ||||||||||||||||| || ||||| ||||| ||||
Sbjct: 549 ctgatgatcattgtcggttttttctgtatcagttgttgcgtgggctcaaatatgttcatt 608
Query: 476 cagccaatgtactgcatcgtgatttaaaaccgagtaacttgctcctgaatgcaaactgtg 535
|||| |||||| ||||||| ||||| ||||| || || ||||||||||||||||| ||||
Sbjct: 609 cagctaatgtattgcatcgagatttgaaacctagcaatttgctcctgaatgcaaattgtg 668
Query: 536 acctcaagattggggattttgggcttgcgaggactaaatcagagacagacttcatgacag 595
| || ||| |||||||||| |||||||||||||| ||||| ||||| ||||| ||||| |
Sbjct: 669 atctaaagcttggggatttcgggcttgcgaggaccaaatccgagactgactttatgactg 728
Query: 596 aatatgttgttacacgttggtaccgagctccagagttgctccttaattgctcagaataca 655
|||||||||||||||||||||| |||||||||||| |||| ||||||||||| |||||||
Sbjct: 729 aatatgttgttacacgttggtatcgagctccagagctgctacttaattgctctgaataca 788
Query: 656 ctgcagctatcgacatttggtctgtcggttgtatactcggtgaaataatgacgcgggagc 715
| ||||| || || ||||||||||||||||||||||||||||||| |||||| || ||||
Sbjct: 789 cagcagcaattgatatttggtctgtcggttgtatactcggtgaaacaatgacacgagagc 848
Query: 716 cgttatttccgggcagagattatgttcagcagcttagactcatcactgagcttataggct 775
| || ||||| || | |||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 849 ccttgtttcccggtaaagattatgttcatcagcttagactcatcactgagcttataggat 908
Query: 776 caccagatgattcaagcctaggattcttaagaagcgacaacgctagaagatacgtaagac 835
| || ||||| |||||| | |||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 909 ctcctgatgactcaagcttgggattcttaagaagtgacaatgcaagaagatacgttagac 968
Query: 836 agcttccacagtatccaagacaaaactttgccgctagattcccaaacatgtcggtcaatg 895
||||||||||||| || ||||| |||||||| |||||||||||||||||||||| ||
Sbjct: 969 agcttccacagtaccctagacagaactttgctgctagattcccaaacatgtcggctggtg 1028
Query: 896 ctgttgatttgctgcagaaaatgctcgtctttgacccaaacagacgcattacagtcgatg 955
| || ||||||||| |||||||||| || ||||| |||| ||||||||| ||||| ||||
Sbjct: 1029 cagtcgatttgctggagaaaatgcttgtttttgatccaagcagacgcatcacagttgatg 1088
Query: 956 aagccttgtgccacccttacttagcaccgctacacgaatat-aacgaggaacctgtgtgt 1014
| || ||||||||||| || || || ||||| || | |||| ||||| ||||| || |||
Sbjct: 1089 aggcgttgtgccacccatatttggcgccgctgcatg-atatcaacgaagaaccggtatgt 1147
Query: 1015 gtgagaccgttccattttgatttcgagcaaccttcattgacggaagagaacatcaaggag 1074
||||| |||||| |||||||||||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 1148 gtgaggccgttcaattttgatttcgagcaacctactttgacagaagagaacattaaggag 1207
Query: 1075 cttatatatcgtgaatcagtcaagtt 1100
|||||||| |||||| ||||||||||
Sbjct: 1208 cttatataccgtgaaacagtcaagtt 1233
>At2g46070.1 68415.m05731 mitogen-activated protein kinase, putative / MAPK,
putative (MPK12) mitogen-activated protein kinase
(MAPK)(AtMPK12), PMID:12119167
Length = 1325
Score = 182 bits (92), Expect = 4e-45
Identities = 338/420 (80%)
Strand = Plus / Plus
Query: 541 aagattggggattttgggcttgcgaggactaaatcagagacagacttcatgacagaatat 600
|||||||| |||||||||||||| || || | || || |||||||||||||| ||||||
Sbjct: 597 aagattggtgattttgggcttgcaagaacaacttccgacacagacttcatgactgaatat 656
Query: 601 gttgttacacgttggtaccgagctccagagttgctccttaattgctcagaatacactgca 660
|| ||||| ||||||||| | ||||| |||||||| ||||| |||||||| ||||| |||
Sbjct: 657 gtcgttacccgttggtacagggctcctgagttgcttcttaactgctcagagtacaccgca 716
Query: 661 gctatcgacatttggtctgtcggttgtatactcggtgaaataatgacgcgggagccgtta 720
||||| || ||||||||||| || || |||||||| ||||| |||||| | | |||||
Sbjct: 717 gctattgatatttggtctgttggctgcatactcggcgaaatcatgacgggacaaccgttg 776
Query: 721 tttccgggcagagattatgttcagcagcttagactcatcactgagcttataggctcacca 780
||||| |||| |||||||||||| |||||||| || || || |||||| ||||||| |||
Sbjct: 777 tttccaggcaaagattatgttcatcagcttaggcttataacagagcttgtaggctctcca 836
Query: 781 gatgattcaagcctaggattcttaagaagcgacaacgctagaagatacgtaagacagctt 840
|| |||| ||||| || ||| | | || |||||||| ||||||||||| || || |||
Sbjct: 837 gacaattccagcctcggcttccttcgcagtgacaacgcaagaagatacgtcaggcaactt 896
Query: 841 ccacagtatccaagacaaaactttgccgctagattcccaaacatgtcggtcaatgctgtt 900
|| | || || | |||| | ||||| ||||||||||| || ||| | | ||| |
Sbjct: 897 ccgcgatacccgaaacaacagtttgctgctagattcccgaaaatgcccactacggctatc 956
Query: 901 gatttgctgcagaaaatgctcgtctttgacccaaacagacgcattacagtcgatgaagcc 960
|||||||| ||| ||||||||||||||| || ||| | ||||| ||||||||||||||
Sbjct: 957 gatttgcttgagagaatgctcgtctttgatcctaaccggcgcatctcagtcgatgaagcc 1016
Score = 145 bits (73), Expect = 9e-34
Identities = 265/329 (80%)
Strand = Plus / Plus
Query: 58 ggtggtcgttatgtgcagtataatgtctatggaaatctctttgaagtttctaaaaagtat 117
||||| || ||||| ||||| || || |||||| | |||||||||||||| | |||||||
Sbjct: 114 ggtggccgctatgttcagtacaacgtttatggacaactctttgaagtttccagaaagtat 173
Query: 118 gttcctcctcttcgtcctatcggcagaggcgcttctggcatcgtctgtgctgcatggaat 177
|| |||||| ||||||| || || |||||||||| || || ||||||||||| |||
Sbjct: 174 gtccctcctattcgtcccattggtagaggcgcttgcggtattgtctgtgctgcggtgaac 233
Query: 178 tcggagacgggtgaggaagtagcgatcaagaagattggtaatgcatttggcaacattatc 237
|| | ||| || ||| |||| || || |||||||| |||||||| |||| ||||| |||
Sbjct: 234 tcagtgactggagagaaagtggctattaagaagatcggtaatgcttttgataacatcatc 293
Query: 238 gacgctaagagaactttgagagagattaagcttcttaagcatatggatcatgacaatgtc 297
|| ||||||||||| | | || ||||| ||||| | ||||||||||||||| || ||
Sbjct: 294 gatgctaagagaacgctacgtgaaattaaacttctcaggcatatggatcatgagaacgtt 353
Query: 298 attgccattatagacataataagaccacctcagccagacaacttcaatgatgttcacatt 357
|| |||| | ||| || ||||||| || || | ||| | |||||||||||| |||||
Sbjct: 354 ataaccatcaaagatattgtaagacctccgcaacgagatatcttcaatgatgtctacatt 413
Query: 358 gtctatgagttaatggacactgatcttca 386
|||||||||||||||||||||||||||||
Sbjct: 414 gtctatgagttaatggacactgatcttca 442
>At4g11330.1 68417.m01829 mitogen-activated protein kinase, putative / MAPK,
putative (MPK5) similar to mitogen-activated protein
kinase homolog 5 (AtMPK5)[Arabidopsis thaliana]
SWISS-PROT:Q39025; PMID:12119167; possible internal
deletion at position 161, missing one A residue;
reference GI:457401
Length = 1522
Score = 79.8 bits (40), Expect = 5e-14
Identities = 220/280 (78%)
Strand = Plus / Plus
Query: 363 tgagttaatggacactgatcttcaccacattatccgctctaaccaaccgttaactgatga 422
|||||||||||| ||||||||||| || ||||| || || |||||| | || | ||||||
Sbjct: 459 tgagttaatggatactgatcttcatcagattattcgatcaaaccaatctttgaatgatga 518
Query: 423 tcattcacggttcttcctgtatcagttgttgcgaggcctcaagtatgtgcattcagccaa 482
||||| | || |||| |||||||| | | ||||| ||||| ||| | |||||||| ||
Sbjct: 519 tcattgtcagtacttcttgtatcagattctacgaggactcaaatatattcattcagcaaa 578
Query: 483 tgtactgcatcgtgatttaaaaccgagtaacttgctcctgaatgcaaactgtgacctcaa 542
||| | |||||||| | || |||||||| ||||| ||||| | || || || || ||
Sbjct: 579 tgttttacatcgtgaccttaagccgagtaatttgcttttgaattcgaattgcgatcttaa 638
Query: 543 gattggggattttgggcttgcgaggactaaatcagagacagacttcatgacagaatatgt 602
|||| || ||||| | || ||||||| |||||| ||||| | |||||||| |||||
Sbjct: 639 gattactgactttggtttggcaaggactacatcagaaacagagtatatgacagagtatgt 698
Query: 603 tgttacacgttggtaccgagctccagagttgctccttaat 642
||| ||||| |||||| |||| |||||| |||| ||||||
Sbjct: 699 tgtaacacgatggtacagagcaccagagctgcttcttaat 738
Score = 67.9 bits (34), Expect = 2e-10
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 79 aatgtctatggaaatctctttgaagtttctaaaaagtatgttcctcctcttcgtcctatc 138
||||| |||||||| | |||||||||||||| ||||||||||||||| |||| |||||
Sbjct: 176 aatgtttatggaaacttgtttgaagtttctaataagtatgttcctcctattcgacctatt 235
Query: 139 ggcagaggcgcttc 152
|| ||||| |||||
Sbjct: 236 ggtagaggagcttc 249
Score = 44.1 bits (22), Expect = 0.003
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 244 aagagaactttgagagagattaagct 269
|||||||| |||||||||||||||||
Sbjct: 340 aagagaacattgagagagattaagct 365
>At1g10210.1 68414.m01151 mitogen-activated protein kinase, putative / MAPK,
putative (MPK1) identical to mitogen-activated protein
kinase homolog 1 (AtMPK1)[Arabidopsis thaliana]
SWISS-PROT:Q39021; PMID:12119167
Length = 1631
Score = 58.0 bits (29), Expect = 2e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 586 ttcatgacagaatatgttgttacacgttggtaccgagctccagag 630
|||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 679 ttcatgactgaatatgttgtgactcgttggtaccgagccccagag 723
Score = 44.1 bits (22), Expect = 0.003
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 339 cttcaatgatgttcacattgtctatgagttaatggacactgatcttcaccacattatc 396
|||||| |||||| | |||| |||||| | |||||||||||||| ||||| ||||||
Sbjct: 429 cttcaaggatgtttatcttgtttatgagctcatggacactgatctccaccagattatc 486
Score = 44.1 bits (22), Expect = 0.003
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 445 cagttgttgcgaggcctcaagtatgtgcattcagccaatgtactgcatcgtgatttaaaa 504
|||||| | ||||| ||||||||| | |||||||||||| | ||||| || ||||| |||
Sbjct: 535 cagttgcttcgagggctcaagtatattcattcagccaatatcctgcaccgagatttgaaa 594
Query: 505 cc 506
||
Sbjct: 595 cc 596
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 29,151
Number of Sequences: 29161
Number of extensions: 29151
Number of successful extensions: 688
Number of sequences better than 10.0: 62
length of query: 1110
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1092
effective length of database: 43,533,334
effective search space: 47538400728
effective search space used: 47538400728
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)