BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01460.F
(1278 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01460.1 68414.m00061 phosphatidylinositol-4-phosphate 5... 2500 0.0
At4g01190.1 68417.m00157 phosphatidylinositol-4-phosphate 5... 157 3e-37
At3g07960.1 68416.m00973 phosphatidylinositol-4-phosphate 5... 50 5e-05
At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5... 44 0.003
At2g47040.1 68415.m05877 pectinesterase family protein cont... 38 0.18
>At1g01460.1 68414.m00061 phosphatidylinositol-4-phosphate 5-kinase family protein
similar to phosphatidylinositol-4-phosphate 5-kinase
AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam
profile PF01504: Phosphatidylinositol-4-phosphate
5-Kinase
Length = 1452
Score = 2500 bits (1261), Expect = 0.0
Identities = 1278/1284 (99%), Gaps = 6/1284 (0%)
Strand = Plus / Plus
Query: 1 atgtttacgcgggagataacagcaaaggacgtgaaagccactgagaaaaacaggattcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atgtttacgcgggagataacagcaaaggacgtgaaagccactgagaaaaacaggattcga 217
Query: 61 tactcttccaaacacataaaacatcttcctcctggaaccattactgagttcgaatggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tactcttccaaacacataaaacatcttcctcctggaaccattactgagttcgaatggaag 277
Query: 121 gattattgtcccttgggattcagacttatacaggaacttgaggatatcaatcatgatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gattattgtcccttgggattcagacttatacaggaacttgaggatatcaatcatgatgag 337
Query: 181 tacatgaagtctatctgtaatgatgagaccttaaggaagctttctactagcaaagttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tacatgaagtctatctgtaatgatgagaccttaaggaagctttctactagcaaagttggt 397
Query: 241 aacatgtttcttctttccaaagatgaccgttttctcattaagattctacgcaaatccgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aacatgtttcttctttccaaagatgaccgttttctcattaagattctacgcaaatccgaa 457
Query: 301 atcaaggttatactagagatgttgcctggttacttccgtcatatccataaatacaggtca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atcaaggttatactagagatgttgcctggttacttccgtcatatccataaatacaggtca 517
Query: 361 accttgttgtccaagaattatggagctcactctgtgaagcctattggaggtgttaagaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 accttgttgtccaagaattatggagctcactctgtgaagcctattggaggtgttaagaca 577
Query: 421 tattttgtcgtcatgtcaaacatactgcagtcggatgtttttatgaacaaggtctatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tattttgtcgtcatgtcaaacatactgcagtcggatgtttttatgaacaaggtctatgat 637
Query: 481 ctaaagggttcatctcaaggtcggactaacaagaagatcaaagtgagagataaaaccata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ctaaagggttcatctcaaggtcggactaacaagaagatcaaagtgagagataaaaccata 697
Query: 541 ttgaaggatatcgaccttgatttttgtttctatgtggattctttggccagacaccgtctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ttgaaggatatcgaccttgatttttgtttctatgtggattctttggccagacaccgtctc 757
Query: 601 attaagcaaacgaagctagattgtgaacttttggaagatgaaggcatcatggattacagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 attaagcaaacgaagctagattgtgaacttttggaagatgaaggcatcatggattacagc 817
Query: 661 ttaatgcttggtttacaagtgaaaggctcgtgtcatggttcaattgatgaattaatcccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 ttaatgcttggtttacaagtgaaaggctcgtgtcatggttcaattgatgaattaatcccg 877
Query: 721 gtatacgacagcttcacatcacgaggctctgttgacagcaatagctctaagtttatgaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 gtatacgacagcttcacatcacgaggctctgttgacagcaatagctctaagtttatgaag 937
Query: 781 acagcttcaaactctccagatagatcatcttctacaatgtattcatgcactcccagcaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 acagcttcaaactctccagatagatcatcttctacaatgtattcatgcactcccagcaga 997
Query: 841 a------ttgatagtgagaactcagtgaatatacaatcagtagcaagtataagccctagt 894
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 aattcagttgatagtgagaactcagtgaatatacaatcagtagcaagtataagccctagt 1057
Query: 895 ccagcacaaaccaacgcttctgattctccatatgaaagccttgtttccaaaacaaatctc 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 ccagcacaaaccaacgcttctgattctccatatgaaagccttgtttccaaaacaaatctc 1117
Query: 955 accaacatcttccaaaacagctcaagcactaacttcggtatgaagataccaggacgagca 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 accaacatcttccaaaacagctcaagcactaacttcggtatgaagataccaggacgagca 1177
Query: 1015 cgacgggttgggagaggagaatcagggagtgtggtgggaaaacagagcagagaaggagga 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 cgacgggttgggagaggagaatcagggagtgtggtgggaaaacagagcagagaaggagga 1237
Query: 1075 gaagaatggtacgatgtgattttgtatcttgggattatagacattttccaagactacggt 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 gaagaatggtacgatgtgattttgtatcttgggattatagacattttccaagactacggt 1297
Query: 1135 gtgagaaaacgccttgaacattgttacaagtcaattcaacacagctctaagacaatctca 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 gtgagaaaacgccttgaacattgttacaagtcaattcaacacagctctaagacaatctca 1357
Query: 1195 gccgtccatcccaagatgtattcttctcgtttccaagactttgtctctcagatcttctta 1254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 gccgtccatcccaagatgtattcttctcgtttccaagactttgtctctcagatcttctta 1417
Query: 1255 ccagacgaagatccttctcactga 1278
||||||||||||||||||||||||
Sbjct: 1418 ccagacgaagatccttctcactga 1441
>At4g01190.1 68417.m00157 phosphatidylinositol-4-phosphate 5-kinase family
protein similar to phosphatidylinositol-4-phosphate
5-kinase AtPIP5K1 [Arabidopsis thaliana] GI:3702691;
contains Pfam profile PF01504:
Phosphatidylinositol-4-phosphate 5-Kinase
Length = 1206
Score = 157 bits (79), Expect = 3e-37
Identities = 277/343 (80%)
Strand = Plus / Plus
Query: 385 gctcactctgtgaagcctattggaggtgttaagacatattttgtcgtcatgtcaaacata 444
||||| |||||||||||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 361 gctcattctgtgaagcctcttggaggtgttaagacatattttgctgtgatgtcaaacatg 420
Query: 445 ctgcagtcggatgtttttatgaacaaggtctatgatctaaagggttcatctcaaggtcgg 504
|| || || | ||| |||||||| |||||||||| || ||||| | |||||||
Sbjct: 421 ctacattcaacgatctttgtgaacaagctctatgatcttaaaggttctccgaaaggtcga 480
Query: 505 actaacaagaagatcaaagtgagagataaaaccatattgaaggatatcgaccttgatttt 564
|||||||||| || |||||||| | | || | |||||||| ||||| | |||||
Sbjct: 481 tctaacaagaaaattgaagtgagaaacaccactgttttgaaggacatcgatttcgatttc 540
Query: 565 tgtttctatgtggattctttggccagacaccgtctcattaagcaaacgaagctagattgt 624
|||||||| || ||| ||||||| ||||| || |||| |||||||| |||||||||||
Sbjct: 541 tgtttctacgttgatcctttggcgagacaacgcatcatcaagcaaacaaagctagattgc 600
Query: 625 gaacttttggaagatgaaggcatcatggattacagcttaatgcttggtttacaagtgaaa 684
|| ||||||||||| ||||| || |||||||| |||||| || ||||||||||| |||
Sbjct: 601 gagcttttggaagaagaaggtataatggattatagcttattggttggtttacaatctaaa 660
Query: 685 ggctcgtgtcatggttcaattgatgaattaatcccggtatacg 727
||||| ||||| |||||| |||||| ||| | |||||| ||||
Sbjct: 661 ggctcatgtcaaggttcacttgatggattgaacccggtttacg 703
Score = 97.6 bits (49), Expect = 2e-19
Identities = 142/173 (82%)
Strand = Plus / Plus
Query: 1069 ggaggagaagaatggtacgatgtgattttgtatcttgggattatagacattttccaagac 1128
|||| ||||||||||||| |||| |||||||| | ||||| |||||| || ||||||
Sbjct: 988 ggagaagaagaatggtacaatgttgttttgtatatagggatagtagacacatttcaagac 1047
Query: 1129 tacggtgtgagaaaacgccttgaacattgttacaagtcaattcaacacagctctaagaca 1188
|| ||| ||| |||||| | |||||||||||||| || |||||| | | ||| || ||
Sbjct: 1048 tatggtatgaagaaacgcatagaacattgttacaaatccattcaatataactcaaactca 1107
Query: 1189 atctcagccgtccatcccaagatgtattcttctcgtttccaagactttgtctc 1241
|||||| |||||||||| ||||| || |||||| | |||||||||||||||||
Sbjct: 1108 atctcaaccgtccatcctaagatctactcttctagattccaagactttgtctc 1160
Score = 93.7 bits (47), Expect = 3e-18
Identities = 212/267 (79%)
Strand = Plus / Plus
Query: 55 attcgatactcttccaaacacataaaacatcttcctcctggaaccattactgagttcgaa 114
|||||||||||| | |||||||| ||||| | || ||||| | || |||||||| ||
Sbjct: 31 attcgatactctacaaaacacattaaacacttgccacctggctcaatcactgagtttgat 90
Query: 115 tggaaggattattgtcccttgggattcagacttatacaggaacttgaggatatcaatcat 174
||||||||||| |||||| | || ||| ||||||| || |||||||||| ||| |||||
Sbjct: 91 tggaaggattactgtcccgttggtttcggacttattcaagaacttgagggtatagatcat 150
Query: 175 gatgagtacatgaagtctatctgtaatgatgagaccttaaggaagctttctactagcaaa 234
||||| ||| || || || || | ||||||||| | | |||| ||||| || | |||
Sbjct: 151 gatgattacttgctatccatttgcactgatgagactctcaagaagatttcttctgggaaa 210
Query: 235 gttggtaacatgtttcttctttccaaagatgaccgttttctcattaagattctacgcaaa 294
|||| || | |||| | ||||||| ||| ||||||||||||| |||||||| || |||
Sbjct: 211 attggaaatgtctttcatatttccaatgataaccgttttctcatcaagattcttcgaaaa 270
Query: 295 tccgaaatcaaggttatactagagatg 321
|||||||| ||||| | ||||||||||
Sbjct: 271 tccgaaattaaggtgacactagagatg 297
>At3g07960.1 68416.m00973 phosphatidylinositol-4-phosphate 5-kinase family protein
similar to phosphatidylinositol-4-phosphate 5-kinase
AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 2781
Score = 50.1 bits (25), Expect = 5e-05
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 1084 tacgatgtgattttgtatcttgggattatagacattttccaagactacg 1132
||||||||||| ||||| | || |||||||||||| ||||||||||||
Sbjct: 2353 tacgatgtgatagtgtatttcggtattatagacattctccaagactacg 2401
Score = 38.2 bits (19), Expect = 0.18
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 113 aatggaaggattattgtcc 131
|||||||||||||||||||
Sbjct: 1544 aatggaaggattattgtcc 1562
>At1g10900.1 68414.m01252 phosphatidylinositol-4-phosphate 5-kinase family protein
similar to phosphatidylinositol-4-phosphate 5-kinase
AtPIP5K1 [Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 2604
Score = 44.1 bits (22), Expect = 0.003
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 475 tatgatctaaagggttcatctcaagg 500
|||||||||||||||||| |||||||
Sbjct: 1751 tatgatctaaagggttcaactcaagg 1776
>At2g47040.1 68415.m05877 pectinesterase family protein contains Pfam profile:
PF01095 pectinesterase
Length = 2215
Score = 38.2 bits (19), Expect = 0.18
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 557 ttgatttttgtttctatgt 575
|||||||||||||||||||
Sbjct: 2115 ttgatttttgtttctatgt 2133
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 44,377
Number of Sequences: 29161
Number of extensions: 44377
Number of successful extensions: 1125
Number of sequences better than 10.0: 41
length of query: 1278
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1260
effective length of database: 43,533,334
effective search space: 54852000840
effective search space used: 54852000840
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)