BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01450.F
(1413 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01450.1 68414.m00060 protein kinase-related contains eu... 2801 0.0
At5g41730.1 68418.m05074 protein kinase family protein cont... 66 9e-10
At1g64300.1 68414.m07287 protein kinase family protein cont... 46 8e-04
At5g52540.1 68418.m06519 expressed protein contains PF05684... 42 0.013
At4g16165.1 68417.m02454 Expressed protein 42 0.013
>At1g01450.1 68414.m00060 protein kinase-related contains eukaryotic protein
kinase domain, INTERPRO:IPR000719
Length = 1413
Score = 2801 bits (1413), Expect = 0.0
Identities = 1413/1413 (100%)
Strand = Plus / Plus
Query: 1 atggctgatttccttttgaagcatttgggagatggaaatgagagccccaagctatttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggctgatttccttttgaagcatttgggagatggaaatgagagccccaagctatttcct 60
Query: 61 tcttctcttctggataacacaaaagattaccaagtgaaaaaaagattagggaatggaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcttctcttctggataacacaaaagattaccaagtgaaaaaaagattagggaatggaagt 120
Query: 121 cagtacaaggagattacctggttaggcgagagctttgcgcttaggcatttctttggggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagtacaaggagattacctggttaggcgagagctttgcgcttaggcatttctttggggat 180
Query: 181 attgatgctttgcttcctcagattactccattgctatctctttcacacccaaacattgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attgatgctttgcttcctcagattactccattgctatctctttcacacccaaacattgta 240
Query: 241 tattacctctgcggattcacggatgaggagaagaaagagtgtttcttggtcatggaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tattacctctgcggattcacggatgaggagaagaaagagtgtttcttggtcatggaactg 300
Query: 301 atgaggaaaacccttggaatgcacatcaaagaggtatgtggtcctaggaagaagaacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaggaaaacccttggaatgcacatcaaagaggtatgtggtcctaggaagaagaacact 360
Query: 361 ctctccctcccggtcgcggttgatctgatgcttcagatagctttgggtatggaatatctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctctccctcccggtcgcggttgatctgatgcttcagatagctttgggtatggaatatctt 420
Query: 421 cactcgaagagaatataccacggagagttgaatccatcaaacattcttgtcaaaccaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cactcgaagagaatataccacggagagttgaatccatcaaacattcttgtcaaaccaaga 480
Query: 481 agtaaccaatccggagatgggtatctgcttgggaagatttttgggttcgggttgaattct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtaaccaatccggagatgggtatctgcttgggaagatttttgggttcgggttgaattct 540
Query: 541 gtcaagggattctctagtaaaagtgcttctttgacgagtcagaatgagaattttccattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtcaagggattctctagtaaaagtgcttctttgacgagtcagaatgagaattttccattc 600
Query: 601 atatggtattctccagaagttctagaggagcaagaacagagtggaactgcaggaagcctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atatggtattctccagaagttctagaggagcaagaacagagtggaactgcaggaagcctt 660
Query: 661 aagtatagtgataaatctgacgtgtatagctttgggatggttagctttgagcttctgaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagtatagtgataaatctgacgtgtatagctttgggatggttagctttgagcttctgaca 720
Query: 721 ggtaaagtaccatttgaagatagccacctgcaaggagataagatgagtagaaacattagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggtaaagtaccatttgaagatagccacctgcaaggagataagatgagtagaaacattagg 780
Query: 781 gccggggagagaccgctttttccatttaattcaccaaagttcataacaaacctgacaaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gccggggagagaccgctttttccatttaattcaccaaagttcataacaaacctgacaaaa 840
Query: 841 cgatgctggcatgctgatcccaatcagcgtccaactttctcatcgataagcagaattctc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cgatgctggcatgctgatcccaatcagcgtccaactttctcatcgataagcagaattctc 900
Query: 901 cggtatatcaaacggtttctagctttgaacccggaatgttacagtagtagccaacaagac 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cggtatatcaaacggtttctagctttgaacccggaatgttacagtagtagccaacaagac 960
Query: 961 ccgtccattgcgcctactgtggattactgcgagatcgagacaaagctattgcagaagctt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ccgtccattgcgcctactgtggattactgcgagatcgagacaaagctattgcagaagctt 1020
Query: 1021 tcttgggaatctacagagctaaccaaagtttcacaggttccttttcaaatgtttgcatat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tcttgggaatctacagagctaaccaaagtttcacaggttccttttcaaatgtttgcatat 1080
Query: 1081 agggttgtggaacgggcaaaaacgtgtgaaaaggataatctccgggaaccatcggaatca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 agggttgtggaacgggcaaaaacgtgtgaaaaggataatctccgggaaccatcggaatca 1140
Query: 1141 ggaagtgaatgggcttcgtgtagcgaggatgagggtggggcaggatcagatgagcagttg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggaagtgaatgggcttcgtgtagcgaggatgagggtggggcaggatcagatgagcagttg 1200
Query: 1201 tcatatgccaaggaaagaagattgtcatgctcctcaaatgatgttggtatgagcaagaag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tcatatgccaaggaaagaagattgtcatgctcctcaaatgatgttggtatgagcaagaag 1260
Query: 1261 caggtttcaaatcttctgaaaagagcttctagcctgaaaccaattcaaaaaccaggtgag 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 caggtttcaaatcttctgaaaagagcttctagcctgaaaccaattcaaaaaccaggtgag 1320
Query: 1321 attatcatcagccaatatatatatatatatataggctccctaacaaatatgaacttggtt 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 attatcatcagccaatatatatatatatatataggctccctaacaaatatgaacttggtt 1380
Query: 1381 acttgtactaatttttttgttttgtgtcactag 1413
|||||||||||||||||||||||||||||||||
Sbjct: 1381 acttgtactaatttttttgttttgtgtcactag 1413
Score = 40.1 bits (20), Expect = 0.050
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 1330 agccaatatatatatatatatataggct 1357
|||| |||||||||||||||||| ||||
Sbjct: 1357 agcctatatatatatatatatattggct 1330
>At5g41730.1 68418.m05074 protein kinase family protein contains Pfam PF00069:
Protein kinase domain
Length = 2136
Score = 65.9 bits (33), Expect = 9e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 671 ataaatctgacgtgtatagctttgggatggttagctttgagcttctgacaggtaaagtac 730
||||| |||| ||||||||||||| ||||| | ||||||||| | ||||||||||| |
Sbjct: 1289 ataaagctgatgtgtatagctttgcaatggtgtgttttgagcttataacaggtaaagttc 1348
Query: 731 catttgaagatag 743
|||||||||||||
Sbjct: 1349 catttgaagatag 1361
>At1g64300.1 68414.m07287 protein kinase family protein contains protein kinase
domain, Pfam:PF00069
Length = 2696
Score = 46.1 bits (23), Expect = 8e-04
Identities = 59/71 (83%)
Strand = Plus / Plus
Query: 671 ataaatctgacgtgtatagctttgggatggttagctttgagcttctgacaggtaaagtac 730
||||| |||| || |||||||||| ||||| | ||||||||| | || |||||||| |
Sbjct: 1571 ataaagctgatgtctatagctttgctatggtgtgttttgagcttataaccggtaaagttc 1630
Query: 731 catttgaagat 741
|||||||||||
Sbjct: 1631 catttgaagat 1641
Score = 34.2 bits (17), Expect = 3.1
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 119 gtcagtacaaggagatt 135
|||||||||||||||||
Sbjct: 1022 gtcagtacaaggagatt 1038
>At5g52540.1 68418.m06519 expressed protein contains PF05684: Protein of unknown
function (DUF819)
Length = 1708
Score = 42.1 bits (21), Expect = 0.013
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1333 caatatatatatatatatata 1353
|||||||||||||||||||||
Sbjct: 1571 caatatatatatatatatata 1551
Score = 40.1 bits (20), Expect = 0.050
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatatag 1354
||||||||||||||||||||
Sbjct: 1545 atatatatatatatatatag 1526
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1551 atatatatatatatatata 1533
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1534 atatatatatatatatata 1552
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1528 atatatatatatatatata 1546
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1561 atatatatatatatatata 1543
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1536 atatatatatatatatata 1554
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1544 atatatatatatatatata 1562
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1546 atatatatatatatatata 1564
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1538 atatatatatatatatata 1556
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1532 atatatatatatatatata 1550
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1530 atatatatatatatatata 1548
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1540 atatatatatatatatata 1558
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1547 atatatatatatatatata 1529
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1559 atatatatatatatatata 1541
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1557 atatatatatatatatata 1539
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1542 atatatatatatatatata 1560
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1563 atatatatatatatatata 1545
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1565 atatatatatatatatata 1547
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1548 atatatatatatatatata 1566
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1549 atatatatatatatatata 1531
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1555 atatatatatatatatata 1537
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1550 atatatatatatatatata 1568
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1567 atatatatatatatatata 1549
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 1553 atatatatatatatatata 1535
Score = 36.2 bits (18), Expect = 0.78
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatat 1352
||||||||||||||||||
Sbjct: 1552 atatatatatatatatat 1569
Score = 36.2 bits (18), Expect = 0.78
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1336 tatatatatatatatata 1353
||||||||||||||||||
Sbjct: 1527 tatatatatatatatata 1544
>At4g16165.1 68417.m02454 Expressed protein
Length = 554
Score = 42.1 bits (21), Expect = 0.013
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1333 caatatatatatatatatata 1353
|||||||||||||||||||||
Sbjct: 46 caatatatatatatatatata 26
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 36 atatatatatatatatata 18
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 25 atatatatatatatatata 43
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 34 atatatatatatatatata 16
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 40 atatatatatatatatata 22
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 42 atatatatatatatatata 24
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 23 atatatatatatatatata 41
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 17 atatatatatatatatata 35
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 21 atatatatatatatatata 39
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 38 atatatatatatatatata 20
Score = 38.2 bits (19), Expect = 0.20
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatata 1353
|||||||||||||||||||
Sbjct: 19 atatatatatatatatata 37
Score = 36.2 bits (18), Expect = 0.78
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1335 atatatatatatatatat 1352
||||||||||||||||||
Sbjct: 27 atatatatatatatatat 44
Score = 36.2 bits (18), Expect = 0.78
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1336 tatatatatatatatata 1353
||||||||||||||||||
Sbjct: 16 tatatatatatatatata 33
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 57,828
Number of Sequences: 29161
Number of extensions: 57828
Number of successful extensions: 2711
Number of sequences better than 10.0: 116
length of query: 1413
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1395
effective length of database: 43,533,334
effective search space: 60729000930
effective search space used: 60729000930
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)