BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= At1g01420.F
(1446 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01420.1 68414.m00057 UDP-glucoronosyl/UDP-glucosyl tran... 2866 0.0
At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl tran... 652 0.0
At4g01070.1 68417.m00145 UDP-glucoronosyl/UDP-glucosyl tran... 168 8e-41
At1g78270.1 68414.m09121 UDP-glucose glucosyltransferase, p... 46 8e-04
At1g21810.1 68414.m02729 expressed protein 46 8e-04
>At1g01420.1 68414.m00057 UDP-glucoronosyl/UDP-glucosyl transferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 1446
Score = 2866 bits (1446), Expect = 0.0
Identities = 1446/1446 (100%)
Strand = Plus / Plus
Query: 1 atggcagatggaaacactccacatgtagcaatcataccaagtcccggtataggtcacctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atggcagatggaaacactccacatgtagcaatcataccaagtcccggtataggtcacctc 60
Query: 61 atcccactcgtcgagttagcaaagcgactccttgacaatcacggtttcaccgtcactttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcccactcgtcgagttagcaaagcgactccttgacaatcacggtttcaccgtcactttc 120
Query: 121 atcatccccggcgattctcctccgtctaaggctcaaagatccgttctcaactctctccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcatccccggcgattctcctccgtctaaggctcaaagatccgttctcaactctctccct 180
Query: 181 tcctccatagcctccgtcttcctccctcccgccgatctttccgacgttccttcgacagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcctccatagcctccgtcttcctccctcccgccgatctttccgacgttccttcgacagct 240
Query: 241 cgaatcgaaactcggatatcgctcaccgtgactcgttccaacccggcgctccgggagctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgaatcgaaactcggatatcgctcaccgtgactcgttccaacccggcgctccgggagctt 300
Query: 301 tttggctcgttatcggcggagaaacgtctcccggcggttctcgtcgtcgatctatttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttggctcgttatcggcggagaaacgtctcccggcggttctcgtcgtcgatctatttggt 360
Query: 361 acggatgcgttcgacgtggctgctgagttccacgtgtcgccatacattttctatgcatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acggatgcgttcgacgtggctgctgagttccacgtgtcgccatacattttctatgcatca 420
Query: 421 aatgccaacgtcctcacgtttctgcttcacttgccgaagctagacgaaacggtgtcgtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatgccaacgtcctcacgtttctgcttcacttgccgaagctagacgaaacggtgtcgtgt 480
Query: 481 gagtttagggaattaaccgaaccggttattattcccggttgtgtccccataaccggtaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gagtttagggaattaaccgaaccggttattattcccggttgtgtccccataaccggtaag 540
Query: 541 gatttcgtcgatccgtgtcaagaccgaaaagatgaatcatacaaatggcttctacacaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gatttcgtcgatccgtgtcaagaccgaaaagatgaatcatacaaatggcttctacacaac 600
Query: 601 gtcaagagattcaaagaagctgaagggattctagtgaattccttcgtcgatttagagcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcaagagattcaaagaagctgaagggattctagtgaattccttcgtcgatttagagcca 660
Query: 661 aacactataaagattgtacaagaaccggctcctgataaaccaccggtttacctgattggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aacactataaagattgtacaagaaccggctcctgataaaccaccggtttacctgattggg 720
Query: 721 ccgttggttaactcgggttcacacgatgctgacgtgaacgatgagtacaaatgtttaaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccgttggttaactcgggttcacacgatgctgacgtgaacgatgagtacaaatgtttaaat 780
Query: 781 tggctagacaaccaaccattcgggtcggttctatacgtatcctttggaagcggcggaaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tggctagacaaccaaccattcgggtcggttctatacgtatcctttggaagcggcggaaca 840
Query: 841 ctcacgtttgagcagttcattgagctggctcttggcctagcggagagtggaaaacggttt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctcacgtttgagcagttcattgagctggctcttggcctagcggagagtggaaaacggttt 900
Query: 901 ctttgggtcatacgaagtccgagtgggatagctagttcatcgtatttcaatccacaaagc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ctttgggtcatacgaagtccgagtgggatagctagttcatcgtatttcaatccacaaagc 960
Query: 961 cgaaatgatccattttcgtttttaccacaaggcttcttagaccgaaccaaagaaaaaggt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cgaaatgatccattttcgtttttaccacaaggcttcttagaccgaaccaaagaaaaaggt 1020
Query: 1021 ctagtggttgggtcatgggctccacaggctcaaattctgactcatacatctataggtgga 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ctagtggttgggtcatgggctccacaggctcaaattctgactcatacatctataggtgga 1080
Query: 1081 tttttaactcattgtggatggaattcgagtctagaaagtattgtaaacggtgtaccgctc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tttttaactcattgtggatggaattcgagtctagaaagtattgtaaacggtgtaccgctc 1140
Query: 1141 atagcatggccgttatacgcggagcaaaagatgaacgcattgctactcgtggatgttggt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 atagcatggccgttatacgcggagcaaaagatgaacgcattgctactcgtggatgttggt 1200
Query: 1201 gcggctctaagagcacgactgggtgaagacggggtcgtaggaagggaagaagtggcgaga 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gcggctctaagagcacgactgggtgaagacggggtcgtaggaagggaagaagtggcgaga 1260
Query: 1261 gtggtaaaaggattgatagaaggagaagaagggaatgcggtaaggaaaaaaatgaaagag 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gtggtaaaaggattgatagaaggagaagaagggaatgcggtaaggaaaaaaatgaaagag 1320
Query: 1321 ttgaaagaaggatctgttagagtcttaagggacgatggattctctaccaaatcgcttaat 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ttgaaagaaggatctgttagagtcttaagggacgatggattctctaccaaatcgcttaat 1380
Query: 1381 gaagtttcgttgaagtggaaagcccaccaacgaaagatcgaccaagaacaggaatcattt 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gaagtttcgttgaagtggaaagcccaccaacgaaagatcgaccaagaacaggaatcattt 1440
Query: 1441 ctatga 1446
||||||
Sbjct: 1441 ctatga 1446
>At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transferase family
protein contains Pfam profile: PF00201 UDP-glucoronosyl
and UDP-glucosyl transferase
Length = 1687
Score = 652 bits (329), Expect = 0.0
Identities = 623/721 (86%)
Strand = Plus / Plus
Query: 12 aaacactccacatgtagcaatcataccaagtcccggtataggtcacctcatcccactcgt 71
|||||||||||| |||||||||| || ||||||||||| |||||||| |||||| ||||
Sbjct: 57 aaacactccacacatagcaatcatgccgagtcccggtatgggtcaccttatcccattcgt 116
Query: 72 cgagttagcaaagcgactccttgacaatcacggtttcaccgtcactttcatcatccccgg 131
||||||||||||||||||| || | | || ||||||||||||| | |||||| ||||
Sbjct: 117 cgagttagcaaagcgactcgttcagcacgactgtttcaccgtcacaatgatcatctccgg 176
Query: 132 cgattctcctccgtctaaggctcaaagatccgttctcaactctctcccttcctccatagc 191
|| || | ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tgaaacttcgccgtctaaggcacaaagatccgttctcaactctctcccttcctccatagc 236
Query: 192 ctccgtcttcctccctcccgccgatctttccgacgttccttcgacagctcgaatcgaaac 251
|||||| || ||||||||||||||||||||||| ||||| || ||||| |||||||||||
Sbjct: 237 ctccgtatttctccctcccgccgatctttccgatgttccctccacagcgcgaatcgaaac 296
Query: 252 tcggatatcgctcaccgtgactcgttccaacccggcgctccgggagctttttggctcgtt 311
|||| ||||||| ||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 297 tcgggccatgctcaccatgactcgttccaatccggcgctccgggagctttttggctcttt 356
Query: 312 atcggcggagaaacgtctcccggcggttctcgtcgtcgatctatttggtacggatgcgtt 371
||| || ||||| |||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct: 357 atcaacgaagaaaagtctcccggcggttctcgtcgtcgatatgtttggtgcggatgcgtt 416
Query: 372 cgacgtggctgctgagttccacgtgtcgccatacattttctatgcatcaaatgccaacgt 431
||||||||| | ||| ||||||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 417 cgacgtggccgttgacttccacgtgtcaccatacattttctatgcatccaatgcaaacgt 476
Query: 432 cctcacgtttctgcttcacttgccgaagctagacgaaacggtgtcgtgtgagtttaggga 491
| | ||||| | |||||||||||||| |||||| ||||||||||||||||||||||| |
Sbjct: 477 cttgtcgttttttcttcacttgccgaaactagacaaaacggtgtcgtgtgagtttaggta 536
Query: 492 attaaccgaaccggttattattcccggttgtgtccccataaccggtaaggatttcgtcga 551
|||||||||||| ||| |||||||| |||||||| |||||||||||||| || | ||
Sbjct: 537 cttaaccgaaccgcttaagattcccggctgtgtcccgataaccggtaaggactttcttga 596
Query: 552 tccgtgtcaagaccgaaaagatgaatcatacaaatggcttctacacaacgtcaagagatt 611
| || |||||||||||| || || ||||||||| |||||| || ||| |||||| |
Sbjct: 597 tacggttcaagaccgaaacgacgacgcatacaaattgcttctccataacaccaagaggta 656
Query: 612 caaagaagctgaagggattctagtgaattccttcgtcgatttagagccaaacactataaa 671
|||||||||| ||||||||||||||||||||||||| ||||||||| | || | |||||
Sbjct: 657 caaagaagctaaagggattctagtgaattccttcgttgatttagagtcgaatgcaataaa 716
Query: 672 gattgtacaagaaccggctcctgataaaccaccggtttacctgattgggccgttggttaa 731
| |||||||||||||||||||||||||| |||| |||| |||||||||| |||||||
Sbjct: 717 ggccttacaagaaccggctcctgataaaccaacggtatacccgattgggccgctggttaa 776
Query: 732 c 732
|
Sbjct: 777 c 777
Score = 408 bits (206), Expect = e-113
Identities = 547/660 (82%), Gaps = 3/660 (0%)
Strand = Plus / Plus
Query: 771 atgtttaaattggctagacaaccaaccattcgggtcggttctatacgtatcctttggaag 830
|||||||| |||||||||||||||||||||||| |||||||||||| |||| ||||||||
Sbjct: 816 atgtttaagttggctagacaaccaaccattcggctcggttctatacatatcatttggaag 875
Query: 831 cggcggaacactcacgtttgagcagttcattgagctggctcttggcctagcggagagtgg 890
|||||||||||| || | ||||||||| | |||||| ||| |||| || |||||||| ||
Sbjct: 876 cggcggaacacttacatgtgagcagtttaatgagcttgctattggtcttgcggagagcgg 935
Query: 891 aaaacggtttctttgggtcatacgaagtccgagtgggatagctagttcatcgtatttcaa 950
|||||||||| ||||||||||||||||||| || | ||||| |||||| |||||||||||
Sbjct: 936 aaaacggtttatttgggtcatacgaagtccaagcgagatagttagttcgtcgtatttcaa 995
Query: 951 tccacaaagccgaaatgatccattttcgtttttaccacaaggcttcttagaccgaaccaa 1010
|||||| ||| | || || ||||||||||||||| || |||||||||||||||||
Sbjct: 996 tccacacagcgagacagaccccttttcgtttttaccaattgggttcttagaccgaaccaa 1055
Query: 1011 agaaaaaggtctagtggttgggtcatgggctccacaggctcaaattctgactcatacatc 1070
||| |||||| | |||||| |||||||||||||||| |||||| ||| ||||| ||||
Sbjct: 1056 agagaaaggtttggtggttccatcatgggctccacaggttcaaatcctggctcatccatc 1115
Query: 1071 tataggtggatttttaactcattgtggatggaattcgagtctagaaagtattgtaaacgg 1130
| | | || |||||||| || |||||||||||||||| ||||||| |||||||||||
Sbjct: 1116 cacatgcgggtttttaacacactgtggatggaattcgaccttagaaagcattgtaaacgg 1175
Query: 1131 tgtaccgctcatagcatggccgttatacgcggagcaaaagatgaacgcattgctactcgt 1190
|||||| |||||||| ||||| |||| |||||||||||||||||| |||||||||||||
Sbjct: 1176 tgtaccactcatagcgtggcctttattcgcggagcaaaagatgaatacattgctactcgt 1235
Query: 1191 ---ggatgttggtgcggctctaagagcacgactgggtgaagacggggtcgtaggaaggga 1247
||||||||| |||||||||||| | ||||||||| ||| | ||| | |||||
Sbjct: 1236 ggaggatgttggagcggctctaagaatccatgcgggtgaagatgggattgtacggaggga 1295
Query: 1248 agaagtggcgagagtggtaaaaggattgatagaaggagaagaagggaatgcggtaaggaa 1307
|||||||| ||||||||| || | | |||| ||||| ||||| || || || || | ||
Sbjct: 1296 agaagtggtgagagtggtgaaggcactgatggaaggtgaagagggaaaagccataggaaa 1355
Query: 1308 aaaaatgaaagagttgaaagaaggatctgttagagtcttaagggacgatggattctctac 1367
||| |||| ||||||||||||||| |||||||||||| | ||||||||||| || |
Sbjct: 1356 taaagtgaaggagttgaaagaaggagttgttagagtcttgggtgacgatggattgtccag 1415
Query: 1368 caaatcgcttaatgaagtttcgttgaagtggaaagcccaccaacgaaagatcgaccaaga 1427
||| || || |||||||| ||| ||||||||| | ||||| ||| | ||| |||||||
Sbjct: 1416 caagtcatttggtgaagttttgttaaagtggaaaacgcaccagcgagatatcaaccaaga 1475
>At4g01070.1 68417.m00145 UDP-glucoronosyl/UDP-glucosyl transferase family
protein contains Pfam profile: PF00201 UDP-glucoronosyl
and UDP-glucosyl transferase
Length = 1858
Score = 168 bits (85), Expect = 8e-41
Identities = 316/393 (80%)
Strand = Plus / Plus
Query: 340 ctcgtcgtcgatctatttggtacggatgcgttcgacgtggctgctgagttccacgtgtcg 399
|||||||||||||| || |||||||| || ||||||||||| | || || |||||| |
Sbjct: 489 ctcgtcgtcgatctcttcggtacggacgctttcgacgtggccgtagaatttcacgtgcca 548
Query: 400 ccatacattttctatgcatcaaatgccaacgtcctcacgtttctgcttcacttgccgaag 459
|| || |||||||| || ||| ||||||||| | ||||| | || || ||||| ||
Sbjct: 549 ccgtatattttctacccaacaacggccaacgtcttgtcgttttttctccatttgcctaaa 608
Query: 460 ctagacgaaacggtgtcgtgtgagtttagggaattaaccgaaccggttattattcccggt 519
|||||||||||||||||||||||||| |||||||||||||||||| |||| |||| ||
Sbjct: 609 ctagacgaaacggtgtcgtgtgagttcagggaattaaccgaaccgcttatgcttcctgga 668
Query: 520 tgtgtccccataaccggtaaggatttcgtcgatccgtgtcaagaccgaaaagatgaatca 579
||||| || | |||| || |||||| | || ||| |||||||| ||||| || ||
Sbjct: 669 tgtgtaccggttgccgggaaagatttccttgacccggcccaagaccggaaagacgatgca 728
Query: 580 tacaaatggcttctacacaacgtcaagagattcaaagaagctgaagggattctagtgaat 639
|||||||||||||| || ||| |||||| | ||||||||| ||||| ||||| ||||||
Sbjct: 729 tacaaatggcttctccataacaccaagaggtacaaagaagccgaaggtattcttgtgaat 788
Query: 640 tccttcgtcgatttagagccaaacactataaagattgtacaagaaccggctcctgataaa 699
||||| | || |||||||||| |||||||| | |||||||||| || |||||||
Sbjct: 789 accttctttgagctagagccaaatgctataaaggccttgcaagaaccgggtcttgataaa 848
Query: 700 ccaccggtttacctgattgggccgttggttaac 732
||||||||||| | | |||| ||||||||||||
Sbjct: 849 ccaccggtttatccggttggaccgttggttaac 881
Score = 109 bits (55), Expect = 7e-23
Identities = 178/219 (81%)
Strand = Plus / Plus
Query: 770 aatgtttaaattggctagacaaccaaccattcgggtcggttctatacgtatcctttggaa 829
|||||||||| ||| | || ||||| || |||| |||||| |||| || |||||||| |
Sbjct: 919 aatgtttaaagtggttggataaccagccgctcggttcggttttatatgtgtcctttggta 978
Query: 830 gcggcggaacactcacgtttgagcagttcattgagctggctcttggcctagcggagagtg 889
| ||||| || ||||| | ||||||| ||| |||||| |||||||| || || || ||||
Sbjct: 979 gtggcggtaccctcacatgtgagcagctcaatgagcttgctcttggtcttgcagatagtg 1038
Query: 890 gaaaacggtttctttgggtcatacgaagtccgagtgggatagctagttcatcgtatttca 949
|||||||||||||||||||||||||||| |||||||| |||| ||| ||||||||
Sbjct: 1039 agcaacggtttctttgggtcatacgaagtcctagtgggatcgctaattcgtcgtattttg 1098
Query: 950 atccacaaagccgaaatgatccattttcgtttttaccac 988
|| |||| |||| || |||||||| | ||||||||||
Sbjct: 1099 attcacatagccaaacagatccattgacatttttaccac 1137
Score = 95.6 bits (48), Expect = 1e-18
Identities = 210/264 (79%)
Strand = Plus / Plus
Query: 31 atcataccaagtcccggtataggtcacctcatcccactcgtcgagttagcaaagcgactc 90
|||||||||||||| || || ||||| ||||| |||||||||||||| || || ||||||
Sbjct: 180 atcataccaagtccgggaatgggtcatctcataccactcgtcgagtttgctaaacgactc 239
Query: 91 cttgacaatcacggtttcaccgtcactttcatcatccccggcgattctcctccgtctaag 150
| | |||||| ||||||| || ||| ||||| ||||||| ||| || || ||
Sbjct: 240 gtccatcttcacggcctcaccgttaccttcgtcatcgccggcgaaggtccaccatcaaaa 299
Query: 151 gctcaaagatccgttctcaactctctcccttcctccatagcctccgtcttcctccctccc 210
||||| ||| |||| ||| ||||||||||||| || || |||||||||| ||||||||
Sbjct: 300 gctcagagaaccgtcctcgactctctcccttcttcaatctcctccgtctttctccctcct 359
Query: 211 gccgatctttccgacgttccttcgacagctcgaatcgaaactcggatatcgctcaccgtg 270
| ||||| |||| | ||||| | |||| |||||| ||||||| || |||||||||
Sbjct: 360 gttgatctcaccgatctctcttcgtccactcgcatcgaatctcggatctccctcaccgtg 419
Query: 271 actcgttccaacccggcgctccgg 294
|||||||| ||||||| |||||||
Sbjct: 420 actcgttcaaacccggagctccgg 443
Score = 91.7 bits (46), Expect = 2e-17
Identities = 85/98 (86%)
Strand = Plus / Plus
Query: 1078 ggatttttaactcattgtggatggaattcgagtctagaaagtattgtaaacggtgtaccg 1137
||||||||||||||||||||||||||||||| |||||| ||| | |||| |||| | ||
Sbjct: 1227 ggatttttaactcattgtggatggaattcgactctagagagtgtagtaagcggtattcca 1286
Query: 1138 ctcatagcatggccgttatacgcggagcaaaagatgaa 1175
|| ||||||||||| |||||||| || || ||||||||
Sbjct: 1287 cttatagcatggccattatacgcagaacagaagatgaa 1324
Score = 67.9 bits (34), Expect = 2e-10
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 1241 gaagggaagaagtggcgagagtggtaaaaggattgatagaaggagaagaagggaatgcgg 1300
|||| ||||| ||||| |||||||||||||||||||| ||||| |||||||| || | |
Sbjct: 1393 gaagagaagaggtggctagagtggtaaaaggattgatggaaggtgaagaaggcaaaggag 1452
Query: 1301 taaggaaaaaaatgaaagagttgaaagaag 1330
| ||||| || ||||| |||||||| ||||
Sbjct: 1453 tgaggaacaagatgaaggagttgaaggaag 1482
>At1g78270.1 68414.m09121 UDP-glucose glucosyltransferase, putative similar to
UDP-glucose glucosyltransferase GI:3928543 from
[Arabidopsis thaliana]
Length = 1792
Score = 46.1 bits (23), Expect = 8e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1078 ggatttttaactcattgtggatggaattcga 1108
|||||||| ||||| ||||||||||||||||
Sbjct: 1320 ggatttttgactcactgtggatggaattcga 1350
>At1g21810.1 68414.m02729 expressed protein
Length = 1887
Score = 46.1 bits (23), Expect = 8e-04
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 166 ctcaactctctcccttcctccat 188
|||||||||||||||||||||||
Sbjct: 606 ctcaactctctcccttcctccat 584
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 37,624
Number of Sequences: 29161
Number of extensions: 37624
Number of successful extensions: 1049
Number of sequences better than 10.0: 51
length of query: 1446
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1428
effective length of database: 43,533,334
effective search space: 62165600952
effective search space used: 62165600952
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)