BLASTX 1.5.4-Paracel [2003-06-05]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AU226197_RAFL14_14_O07.r
         (426 letters)

Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr 
           1,895,298 sequences; 629,712,918 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB18992.1|  porcupine [Drosophila melanogaster]                31   4.5  
ref|NP_476890.1|  CG6205-PA [Drosophila melanogaster]|gi|729...    31   4.5  
ref|NP_984118.1|  ADR022Wp [Eremothecium gossypii]|gi|449826...    30   9.9  

>gb|AAB18992.1| porcupine [Drosophila melanogaster]
          Length = 525

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 120 CLTSRTTWFTSLRVLLPNIVL 58
           CL  R +W  SLR LLPN+V+
Sbjct: 246 CLVPRNSWLVSLRRLLPNVVI 266



>ref|NP_476890.1| CG6205-PA [Drosophila melanogaster]|gi|7293452|gb|AAF48828.1|
           CG6205-PA [Drosophila
           melanogaster]|gi|17862492|gb|AAL39723.1| LD31570p
           [Drosophila melanogaster]
          Length = 525

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 120 CLTSRTTWFTSLRVLLPNIVL 58
           CL  R +W  SLR LLPN+V+
Sbjct: 246 CLVPRNSWLVSLRRLLPNVVI 266



>ref|NP_984118.1| ADR022Wp [Eremothecium gossypii]|gi|44982679|gb|AAS51942.1|
           ADR022Wp [Eremothecium gossypii]
          Length = 357

 Score = 30.0 bits (66), Expect = 9.9
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -3

Query: 130 IECMSHVTYNMVYKFESVVTKYSTSFIFLCTLSLFELASY 11
           I C+  V+YN++  +E  + +YS + IF+  + L+    Y
Sbjct: 85  IACILRVSYNLITPYEVALFRYSLAMIFMQLILLYTSMCY 124



  Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
    Posted date:  Jul 5, 2004 10:54 PM
  Number of letters in database: 629,712,918
  Number of sequences in database:  1,895,298
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 117
effective length of database: 407,963,052
effective search space used: 9791113248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)