BLASTX 1.5.4-Paracel [2003-06-05]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AI996795.x
         (443 letters)

Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr 
           1,895,298 sequences; 629,712,918 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_704767.1|  hypothetical protein [Plasmodium falciparu...    31   5.6  
ref|ZP_00328364.1|  COG0421: Spermidine synthase [Trichodesm...    30   7.4  

>ref|NP_704767.1| hypothetical protein [Plasmodium falciparum
           3D7]|gi|23505128|emb|CAD51910.1| hypothetical protein
           [Plasmodium falciparum 3D7]
          Length = 4202

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 16/60 (26%), Positives = 27/60 (44%)
 Frame = +3

Query: 42  MHGNTYANTCDS*YRKXNHRSTSSLFNSXRRVISTIYKHVYICNDKTSNTLLSXVQNHET 221
           +H N Y N C S   + N RS   +  +       I KH +   +  +++ L   QN++T
Sbjct: 153 VHPNIYYNNCLSDVHEKNDRSKFEVLKNDNEKDKLIIKHPFFLKNYKNDSSLQYEQNNDT 212



>ref|ZP_00328364.1| COG0421: Spermidine synthase [Trichodesmium erythraeum IMS101]
          Length = 308

 Score = 30.4 bits (67), Expect = 7.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 132 RVISTIYKHVYICNDKTSNTLLSXVQN 212
           + I T++ H+YICN    NT++   +N
Sbjct: 218 KTIKTVFPHLYICNTSGGNTIIIGTRN 244



  Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
    Posted date:  Jul 5, 2004 10:54 PM
  Number of letters in database: 629,712,918
  Number of sequences in database:  1,895,298
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 123
effective length of database: 396,591,264
effective search space used: 9518190336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)