BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.8301.C1
(1617 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12120.1 68416.m01508 omega-6 fatty acid desaturase, end... 3182 0.0
At4g39900.1 68417.m05652 expressed protein 76 1e-12
At4g40060.1 68417.m05672 homeobox-leucine zipper protein 16... 72 2e-11
At4g17950.1 68417.m02673 DNA-binding family protein contain... 70 6e-11
At3g10050.1 68416.m01205 threonine ammonia-lyase / threonin... 70 6e-11
>At3g12120.1 68416.m01508 omega-6 fatty acid desaturase, endoplasmic reticulum
(FAD2) / delta-12 desaturase identical to omega-6 fatty
acid desaturase, endoplasmic reticulum (FAD2) SP:P46313
[Arabidopsis thaliana (Mouse-ear cress)] (Plant Cell
6:147-158(1994))
Length = 1615
Score = 3182 bits (1605), Expect = 0.0
Identities = 1612/1613 (99%), Gaps = 1/1613 (0%)
Strand = Plus / Plus
Query: 2 gaccaccagaagaagagccacacactcacaaattaaaaagagagagagagagagagagac 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaccaccagaagaagagccacacactcacaaattaaaaagagagagagagagagagagac 60
Query: 62 agagagagagagagattctgcggaggagcttcttcttcgtagggtgttcatcgttattaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagagagagagagattctgcggaggagcttcttcttcgtagggtgttcatcgttattaa 120
Query: 122 cgttatcgcccctacgtcagctccatctccagaaacatgggtgcaggtggaagaatgccg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgttatcgcccctacgtcagctccatctccagaaacatgggtgcaggtggaagaatgccg 180
Query: 182 gttcctacttcttccaagaaatcggaaaccgacaccacaaagcgtgtgccgtgcgagaaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttcctacttcttccaagaaatcggaaaccgacaccacaaagcgtgtgccgtgcgagaaa 240
Query: 242 ccgcctttctcggtgggagatctgaagaaagcaatcccgccgcattgtttcaaacgctca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgcctttctcggtgggagatctgaagaaagcaatcccgccgcattgtttcaaacgctca 300
Query: 302 atccctcgctctttctcctaccttatcagtgacatcattatagcctcatgcttctactac 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atccctcgctctttctcctaccttatcagtgacatcattatagcctcatgcttctactac 360
Query: 362 gtcgccaccaattacttctctctcctccctcagcctctctcttacttggcttggccactc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcgccaccaattacttctctctcctccctcagcctctctcttacttggcttggccactc 420
Query: 422 tattgggcctgtcaaggctgtgtcctaactggtatctgggtcatagcccacgaatgcggt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tattgggcctgtcaaggctgtgtcctaactggtatctgggtcatagcccacgaatgcggt 480
Query: 482 caccacgcattcagcgactaccaatggctggatgacacagttggtcttatcttccattcc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caccacgcattcagcgactaccaatggctggatgacacagttggtcttatcttccattcc 540
Query: 542 ttcctcctcgtcccttacttctcctggaagtatagtcatcgccgtcaccattccaacact 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcctcctcgtcccttacttctcctggaagtatagtcatcgccgtcaccattccaacact 600
Query: 602 ggatccctcgaaagagatgaagtatttgtcccaaagcagaaatcagcaatcaagtggtac 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggatccctcgaaagagatgaagtatttgtcccaaagcagaaatcagcaatcaagtggtac 660
Query: 662 gggaaatacctcaacaaccctcttggacgcatcatgatgttaaccgtccagtttgtcctc 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gggaaatacctcaacaaccctcttggacgcatcatgatgttaaccgtccagtttgtcctc 720
Query: 722 gggtggcccttgtacttagcctttaacgtctctggcagaccgtatgacgggttcgcttgc 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gggtggcccttgtacttagcctttaacgtctctggcagaccgtatgacgggttcgcttgc 780
Query: 782 catttcttccccaacgctcccatctacaatgaccgagaacgcctccagatatacctctct 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 catttcttccccaacgctcccatctacaatgaccgagaacgcctccagatatacctctct 840
Query: 842 gatgcgggtattctagccgtctgttttggtctttaccgttacgctgctgcacaagggatg 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gatgcgggtattctagccgtctgttttggtctttaccgttacgctgctgcacaagggatg 900
Query: 902 gcctcgatgatctgcctctacggagtaccgcttctgatagtgaatgcgttcctcgtcttg 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gcctcgatgatctgcctctacggagtaccgcttctgatagtgaatgcgttcctcgtcttg 960
Query: 962 atcacttacttgcagcacactcatccctcgttgcctcactacgattcatcagagtgggac 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atcacttacttgcagcacactcatccctcgttgcctcactacgattcatcagagtgggac 1020
Query: 1022 tggctcaggggagctttggctaccgtagacagagactacggaatcttgaacaaggtgttc 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tggctcaggggagctttggctaccgtagacagagactacggaatcttgaacaaggtgttc 1080
Query: 1082 cacaacattacagacacacacgtggctcatcacctgttctcgacaatgccgcattataac 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cacaacattacagacacacacgtggctcatcacctgttctcgacaatgccgcattataac 1140
Query: 1142 gcaatggaagctacaaaggcgataaagccaattctgggagactattaccagttcgatgga 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gcaatggaagctacaaaggcgataaagccaattctgggagactattaccagttcgatgga 1200
Query: 1202 acaccgtggtatgtagcgatgtatagggaggcaaaggagtgtatctatgtagaaccggac 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 acaccgtggtatgtagcgatgtatagggaggcaaaggagtgtatctatgtagaaccggac 1260
Query: 1262 agggaaggtgacaagaaaggtgtgtactggtacaacaataagttatgaggatgatggtga 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 agggaaggtgacaagaaaggtgtgtactggtacaacaataagttatgaggatgatggtga 1320
Query: 1322 agaaattgtcgacctttctcttgtctgtttgtcttttgttaaagaagctatgcttcgttt 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 agaaattgtcgacctttctcttgtctgtttgtcttttgttaaagaagctatgcttcgttt 1380
Query: 1382 taataatcttattgtccattttgttgtgttatgacattttggctgctcattatgttatgt 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 taataatcttattgtccattttgttgtgttatgacattttggctgctcattatgttatgt 1440
Query: 1442 gggaagttagtgttcaaatgttttgtgtcggtattgttcttctcatcgctgttttgttgg 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gggaagttagtgttcaaatgttttgtgtcggtattgttcttctcatcgctgttttgttgg 1500
Query: 1502 gatcgtagaaatgtgaccttcggacagtaaaactcttgtactaaaactatctccctattg 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gatcgtagaaatgtgaccttcggacagtaaaactcttgtactaaaactatctccctattg 1560
Query: 1562 gcatttcttaaacttttaatagttacgtgcctcgtagtgaatcttgacttgag 1614
||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1561 gcatttcttaaacttttaatagttacgtg-ctcgtagtgaatcttgacttgag 1612
>At4g39900.1 68417.m05652 expressed protein
Length = 1201
Score = 75.8 bits (38), Expect = 1e-12
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 35 taaaaagagagagagagagagagagacagagagagagagaga 76
|||||||||||||||||||||||||| |||||||||||||||
Sbjct: 76 taaaaagagagagagagagagagagagagagagagagagaga 35
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 47 agagagagagagagagagagagagagagagagagaga 11
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 51 agagagagagagagagagagagagagagagagagaga 15
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 61 agagagagagagagagagagagagagagagagagaga 25
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 39 agagagagagagagagagagagagagagagagagaga 3
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 45 agagagagagagagagagagagagagagagagagaga 9
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 43 agagagagagagagagagagagagagagagagagaga 7
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 49 agagagagagagagagagagagagagagagagagaga 13
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 65 agagagagagagagagagagagagagagagagagaga 29
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 69 agagagagagagagagagagagagagagagagagaga 33
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 55 agagagagagagagagagagagagagagagagagaga 19
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 53 agagagagagagagagagagagagagagagagagaga 17
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 59 agagagagagagagagagagagagagagagagagaga 23
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 63 agagagagagagagagagagagagagagagagagaga 27
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 67 agagagagagagagagagagagagagagagagagaga 31
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 57 agagagagagagagagagagagagagagagagagaga 21
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 41 agagagagagagagagagagagagagagagagagaga 5
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 37 agagagagagagagagagagagagagagagagagaga 1
>At4g40060.1 68417.m05672 homeobox-leucine zipper protein 16 (HB-16) / HD-ZIP
transcription factor 16 identical to homeodomain
leucine-zipper protein ATHB-16 (GP:5668909|)
{Arabidopsis thaliana}
Length = 1518
Score = 71.9 bits (36), Expect = 2e-11
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 37 aaaagagagagagagagagagagacagagagagagagaga 76
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 117 aaaagagagagagagagagagagagagagagagagagaga 78
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 108 agagagagagagagagagagagagagagagagagaga 72
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 104 agagagagagagagagagagagagagagagagagaga 68
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 110 agagagagagagagagagagagagagagagagagaga 74
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 102 agagagagagagagagagagagagagagagagagaga 66
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 106 agagagagagagagagagagagagagagagagagaga 70
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 112 agagagagagagagagagagagagagagagagagaga 76
>At4g17950.1 68417.m02673 DNA-binding family protein contains Pfam PF03479:
Domain of unknown function (DUF296); contains Pfam
PF02178: AT hook motif;
Length = 1850
Score = 69.9 bits (35), Expect = 6e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 38 aaagagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||||| |||||||||||||||
Sbjct: 4 aaagagagagagagagagagagagagagagagagagaga 42
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 8 agagagagagagagagagagagagagagagagagaga 44
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 40 agagagagagagagagagagagagagagagagagaga 76
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 36 agagagagagagagagagagagagagagagagagaga 72
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 28 agagagagagagagagagagagagagagagagagaga 64
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 12 agagagagagagagagagagagagagagagagagaga 48
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 42 agagagagagagagagagagagagagagagagagaga 78
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 22 agagagagagagagagagagagagagagagagagaga 58
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 16 agagagagagagagagagagagagagagagagagaga 52
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 18 agagagagagagagagagagagagagagagagagaga 54
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 44 agagagagagagagagagagagagagagagagagaga 80
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 34 agagagagagagagagagagagagagagagagagaga 70
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 26 agagagagagagagagagagagagagagagagagaga 62
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 10 agagagagagagagagagagagagagagagagagaga 46
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 20 agagagagagagagagagagagagagagagagagaga 56
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 24 agagagagagagagagagagagagagagagagagaga 60
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 38 agagagagagagagagagagagagagagagagagaga 74
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 14 agagagagagagagagagagagagagagagagagaga 50
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 32 agagagagagagagagagagagagagagagagagaga 68
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 30 agagagagagagagagagagagagagagagagagaga 66
Score = 63.9 bits (32), Expect = 4e-09
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagag 75
||||||||||||||||||||| ||||||||||||||
Sbjct: 46 agagagagagagagagagagagagagagagagagag 81
Score = 60.0 bits (30), Expect = 6e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 39 aagagagagagagagagagagacagagagagagagaga 76
|||| ||||||||||||||||| |||||||||||||||
Sbjct: 1 aagaaagagagagagagagagagagagagagagagaga 38
>At3g10050.1 68416.m01205 threonine ammonia-lyase / threonine dehydratase /
threonine deaminase (OMR1) identical to SP|Q9ZSS6
Threonine dehydratase biosynthetic, chloroplast precursor
(EC 4.3.1.19, formerly EC 4.2.1.16) (Threonine deaminase)
(TD) {Arabidopsis thaliana}
Length = 2238
Score = 69.9 bits (35), Expect = 6e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 38 aaagagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||||| |||||||||||||||
Sbjct: 2095 aaagagagagagagagagagagagagagagagagagaga 2133
Score = 67.9 bits (34), Expect = 3e-10
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 35 taaaaagagagagagagagagagagacagagagagagagaga 76
|||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 2094 taaagagagagagagagagagagagagagagagagagagaga 2135
Score = 67.9 bits (34), Expect = 3e-10
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagagat 77
||||||||||||||||||||| ||||||||||||||||
Sbjct: 2123 agagagagagagagagagagagagagagagagagagat 2160
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2119 agagagagagagagagagagagagagagagagagaga 2155
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2103 agagagagagagagagagagagagagagagagagaga 2139
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2105 agagagagagagagagagagagagagagagagagaga 2141
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2101 agagagagagagagagagagagagagagagagagaga 2137
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2107 agagagagagagagagagagagagagagagagagaga 2143
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2111 agagagagagagagagagagagagagagagagagaga 2147
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2121 agagagagagagagagagagagagagagagagagaga 2157
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2113 agagagagagagagagagagagagagagagagagaga 2149
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2109 agagagagagagagagagagagagagagagagagaga 2145
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2117 agagagagagagagagagagagagagagagagagaga 2153
Score = 65.9 bits (33), Expect = 1e-09
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 40 agagagagagagagagagagacagagagagagagaga 76
||||||||||||||||||||| |||||||||||||||
Sbjct: 2115 agagagagagagagagagagagagagagagagagaga 2151
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 71,997
Number of Sequences: 29161
Number of extensions: 71997
Number of successful extensions: 10441
Number of sequences better than 10.0: 677
length of query: 1617
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1599
effective length of database: 43,533,334
effective search space: 69609801066
effective search space used: 69609801066
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)