BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.6515.C2
(1740 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36530.1 68415.m04481 enolase identical to SWISS-PROT:P2... 3445 0.0
At1g74030.1 68414.m08573 enolase, putative similar to Swiss... 52 2e-05
At1g27100.1 68414.m03303 expressed protein contains Pfam p... 38 0.24
At1g15430.2 68414.m01853 expressed protein 38 0.24
At1g15430.1 68414.m01852 expressed protein 38 0.24
>At2g36530.1 68415.m04481 enolase identical to SWISS-PROT:P25696 enolase (EC
4.2.1.11) (2-phosphoglycerate dehydratase)(2-phospho-D-
glycerate hydro-lyase) [Arabidopsis thaliana]
Length = 1740
Score = 3445 bits (1738), Expect = 0.0
Identities = 1738/1738 (100%)
Strand = Plus / Plus
Query: 1 ctcagctactactgttgaagcgattctcactaaaaccctcgaacacatcgcctttatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcagctactactgttgaagcgattctcactaaaaccctcgaacacatcgcctttatctc 60
Query: 61 tttctctagatctactcgctatggctactatcaccgttgttaaggctagacagatcttcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttctctagatctactcgctatggctactatcaccgttgttaaggctagacagatcttcg 120
Query: 121 acagtcgtggtaatcccaccgttgaggttgatatccacacgtcaaatggtattaaggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acagtcgtggtaatcccaccgttgaggttgatatccacacgtcaaatggtattaaggtta 180
Query: 181 cagcagctgttccaagtggagcttccactggtatctatgaggctcttgagctgagggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagcagctgttccaagtggagcttccactggtatctatgaggctcttgagctgagggatg 240
Query: 241 gaggatctgactaccttggaaagggtgtatctaaggctgttggcaatgtgaacaacatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaggatctgactaccttggaaagggtgtatctaaggctgttggcaatgtgaacaacatca 300
Query: 301 tcgggccagcacttattggaaaggacccaactcagcagactgctattgacaacttcatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgggccagcacttattggaaaggacccaactcagcagactgctattgacaacttcatgg 360
Query: 361 tccatgaacttgacggaacccaaaacgagtgggggtggtgcaagcaaaagcttggagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccatgaacttgacggaacccaaaacgagtgggggtggtgcaagcaaaagcttggagcca 420
Query: 421 atgcgattcttgctgtgtctcttgctgtctgcaaagctggggctgttgtcagcggcattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgcgattcttgctgtgtctcttgctgtctgcaaagctggggctgttgtcagcggcattc 480
Query: 481 ctctatacaagcacattgccaaccttgctggtaaccccaagattgtgctaccagttcctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctctatacaagcacattgccaaccttgctggtaaccccaagattgtgctaccagttcctg 540
Query: 541 ccttcaacgtcatcaatggtggatcccatgccggaaacaagcttgctatgcaggagttta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccttcaacgtcatcaatggtggatcccatgccggaaacaagcttgctatgcaggagttta 600
Query: 601 tgatcctccctgttggagctgcttctttcaaggaagccatgaagatgggtgtggaagttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgatcctccctgttggagctgcttctttcaaggaagccatgaagatgggtgtggaagttt 660
Query: 661 accaccacttgaagtctgtgattaagaagaagtacggccaggatgccacaaatgttggtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 accaccacttgaagtctgtgattaagaagaagtacggccaggatgccacaaatgttggtg 720
Query: 721 atgaaggtgggtttgcaccaaacattcaggagaacaaggagggtcttgaattgctcaaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgaaggtgggtttgcaccaaacattcaggagaacaaggagggtcttgaattgctcaaga 780
Query: 781 ctgctatcgagaaggctggatacactggaaaggttgtcattggaatggatgttgccgctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctgctatcgagaaggctggatacactggaaaggttgtcattggaatggatgttgccgctt 840
Query: 841 cagagttctactcagaagacaagacctacgacttgaacttcaaagaagagaacaacaatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cagagttctactcagaagacaagacctacgacttgaacttcaaagaagagaacaacaatg 900
Query: 901 gctctcagaagatttctggtgatgctctaaaggacctgtacaagtcctttgtcgctgagt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gctctcagaagatttctggtgatgctctaaaggacctgtacaagtcctttgtcgctgagt 960
Query: 961 acccaatcgtgtccattgaggacccatttgaccaagatgactgggagcactatgctaaga 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 acccaatcgtgtccattgaggacccatttgaccaagatgactgggagcactatgctaaga 1020
Query: 1021 tgaccactgagtgtggaaccgaggttcagattgtcggtgatgatttgttggtcactaacc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tgaccactgagtgtggaaccgaggttcagattgtcggtgatgatttgttggtcactaacc 1080
Query: 1081 ccaagagagttgctaaggcaatcgcagagaagtcttgcaatgctcttcttttgaaggtta 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ccaagagagttgctaaggcaatcgcagagaagtcttgcaatgctcttcttttgaaggtta 1140
Query: 1141 accaaatcggatctgtaaccgagagtatcgaggcagttaagatgtcgaagaaagcaggtt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 accaaatcggatctgtaaccgagagtatcgaggcagttaagatgtcgaagaaagcaggtt 1200
Query: 1201 ggggagtgatgaccagccacagaagtggtgaaaccgaggacacattcattgctgacttag 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ggggagtgatgaccagccacagaagtggtgaaaccgaggacacattcattgctgacttag 1260
Query: 1261 ccgttggcttgtccactggacaaatcaaaaccggtgctccttgcagatccgagcgtcttg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ccgttggcttgtccactggacaaatcaaaaccggtgctccttgcagatccgagcgtcttg 1320
Query: 1321 ccaagtacaaccagcttttgcgtattgaggaggagttgggatcagaggcaatttacgctg 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ccaagtacaaccagcttttgcgtattgaggaggagttgggatcagaggcaatttacgctg 1380
Query: 1381 gagtcaacttccgcaaacctgtggaaccctactaaatggagcttttagaagcaaagtggt 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gagtcaacttccgcaaacctgtggaaccctactaaatggagcttttagaagcaaagtggt 1440
Query: 1441 cttctttgtgacgaggagaagatgacctgagtttgatcatttgctttaattaaataaaac 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cttctttgtgacgaggagaagatgacctgagtttgatcatttgctttaattaaataaaac 1500
Query: 1501 gttctgtttttgtttcttctttgtttggtttcttacgtcttttgttgaaccctttttggg 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gttctgtttttgtttcttctttgtttggtttcttacgtcttttgttgaaccctttttggg 1560
Query: 1561 aaaagttactcatttttgtaagggaaacatgagaatgctctgcctttgtcgaggacggta 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 aaaagttactcatttttgtaagggaaacatgagaatgctctgcctttgtcgaggacggta 1620
Query: 1621 gccccttatttcaatctaatttcggctttactctttaatcttctcatgtgattgttatga 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gccccttatttcaatctaatttcggctttactctttaatcttctcatgtgattgttatga 1680
Query: 1681 tctctggtgacatacgatggagttttaacaaaaataaaataagttcttcattattata 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 tctctggtgacatacgatggagttttaacaaaaataaaataagttcttcattattata 1738
>At1g74030.1 68414.m08573 enolase, putative similar to Swiss-Prot:P15007 enolase
(EC 4.2.1.11) (2-phosphoglycerate
dehydratase)(2-phospho-D- glycerate hydro-lyase)
[Drosophila melanogaster]
Length = 1745
Score = 52.0 bits (26), Expect = 2e-05
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1111 agtcttgcaatgctcttcttttgaaggttaacca 1144
|||||||||||||||| || ||||||||||||||
Sbjct: 1175 agtcttgcaatgctctactcttgaaggttaacca 1208
Score = 40.1 bits (20), Expect = 0.062
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 585 gctatgcaggagtttatgatcctccctgttggagct 620
|||||||| ||||||||||| || ||||| ||||||
Sbjct: 655 gctatgcaagagtttatgatactacctgtaggagct 690
Score = 36.2 bits (18), Expect = 0.97
Identities = 48/58 (82%)
Strand = Plus / Plus
Query: 186 gctgttccaagtggagcttccactggtatctatgaggctcttgagctgagggatggag 243
|||||||||||||| || || || || ||||| || || |||||||| || |||||||
Sbjct: 271 gctgttccaagtggtgcatctaccgggatctacgaagcgcttgagcttagagatggag 328
Score = 34.2 bits (17), Expect = 3.8
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 1059 gatgatttgttggtcactaaccccaagag 1087
||||| ||||| ||||||||||| |||||
Sbjct: 1123 gatgacttgttagtcactaacccgaagag 1151
Score = 34.2 bits (17), Expect = 3.8
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 531 ccagttcctgccttcaacgtcatcaatgg 559
||||||||||| ||||| || ||||||||
Sbjct: 601 ccagttcctgcattcaatgtgatcaatgg 629
>At1g27100.1 68414.m03303 expressed protein contains Pfam profile: PF04601
protein of unknown function (DUF569
Length = 2090
Score = 38.2 bits (19), Expect = 0.24
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1503 tctgtttttgtttcttctt 1521
|||||||||||||||||||
Sbjct: 53 tctgtttttgtttcttctt 71
>At1g15430.2 68414.m01853 expressed protein
Length = 1554
Score = 38.2 bits (19), Expect = 0.24
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1113 tcttgcaatgctcttcttt 1131
|||||||||||||||||||
Sbjct: 746 tcttgcaatgctcttcttt 764
>At1g15430.1 68414.m01852 expressed protein
Length = 1136
Score = 38.2 bits (19), Expect = 0.24
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1113 tcttgcaatgctcttcttt 1131
|||||||||||||||||||
Sbjct: 328 tcttgcaatgctcttcttt 346
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 56,971
Number of Sequences: 29161
Number of extensions: 56971
Number of successful extensions: 1405
Number of sequences better than 10.0: 42
length of query: 1740
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1722
effective length of database: 43,533,334
effective search space: 74964401148
effective search space used: 74964401148
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)