BLASTN 2.2.3 [Apr-24-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PTA.sd.5022.C1
         (1497 letters)

Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa 
           29,161 sequences; 44,058,232 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g13360.1  68415.m01474 serine-glyoxylate aminotransferase...  2932   0.0  
At2g13360.2  68415.m01475 serine-glyoxylate aminotransferase...  2859   0.0  
At5g60460.1  68418.m07583 sec61beta family protein similar t...    40   0.053
At4g09770.1  68417.m01605 meprin and TRAF homology domain-co...    40   0.053
At3g01060.3  68416.m00009 expressed protein                        40   0.053
>At2g13360.1 68415.m01474 serine-glyoxylate aminotransferase-related similar to
            serine-glyoxylate aminotransferase
            (GI:21535798)[Methylobacterium dichloromethanicum;
            contains TIGRFAM TIGR01364: phosphoserine
            aminotransferase; contains Pfam PF00266:
            aminotransferase, class V]
          Length = 1492

 Score = 2932 bits (1479), Expect = 0.0
 Identities = 1479/1479 (100%)
 Strand = Plus / Plus

                                                                        
Query: 3    aaagaagaagatatattaaagaggtttgtgaagacgaaggagtccaaaacctccctcagg 62
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aaagaagaagatatattaaagaggtttgtgaagacgaaggagtccaaaacctccctcagg 60

                                                                        
Query: 63   agcttccgccttattcagagtgtagaggaggatccaaaagaaaagaggaaaaaatggact 122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   agcttccgccttattcagagtgtagaggaggatccaaaagaaaagaggaaaaaatggact 120

                                                                        
Query: 123  atatgtatggaccagggagacaccatctgtttgtaccaggaccagtgaacataccggaac 182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  atatgtatggaccagggagacaccatctgtttgtaccaggaccagtgaacataccggaac 180

                                                                        
Query: 183  cggtaatccgggcgatgaaccggaacaacgaggattaccggtcaccagccattccggcgc 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  cggtaatccgggcgatgaaccggaacaacgaggattaccggtcaccagccattccggcgc 240

                                                                        
Query: 243  ttacgaaaacattgttggaggatgttaagaagatattcaagaccacatcagggacacctt 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  ttacgaaaacattgttggaggatgttaagaagatattcaagaccacatcagggacacctt 300

                                                                        
Query: 303  ttctgtttcccacgaccgggactggtgcttgggagagtgccttgaccaacacgttatctc 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ttctgtttcccacgaccgggactggtgcttgggagagtgccttgaccaacacgttatctc 360

                                                                        
Query: 363  ctggagacaggattgtttcgtttctgattggacaatttagcttgctctggattgaccagc 422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  ctggagacaggattgtttcgtttctgattggacaatttagcttgctctggattgaccagc 420

                                                                        
Query: 423  agaagaggcttaatttcaatgttgatgtggttgagagtgattggggacaaggtgctaatc 482
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  agaagaggcttaatttcaatgttgatgtggttgagagtgattggggacaaggtgctaatc 480

                                                                        
Query: 483  tccaagtcttggcctcaaagctctcacaagacgagaatcataccatcaaagccatttgca 542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  tccaagtcttggcctcaaagctctcacaagacgagaatcataccatcaaagccatttgca 540

                                                                        
Query: 543  ttgtccacaacgagaccgcgaccggagttaccaatgacatctctgctgtccgcacactcc 602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  ttgtccacaacgagaccgcgaccggagttaccaatgacatctctgctgtccgcacactcc 600

                                                                        
Query: 603  tcgatcactacaagcatccggctttgctgctagtggacggtgtttcgtccatctgcgcgc 662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tcgatcactacaagcatccggctttgctgctagtggacggtgtttcgtccatctgcgcgc 660

                                                                        
Query: 663  ttgatttccgaatggatgagtggggagtggacgtggccttgactgggtctcagaaagcct 722
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  ttgatttccgaatggatgagtggggagtggacgtggccttgactgggtctcagaaagcct 720

                                                                        
Query: 723  tatctcttccaacaggacttggtattgtctgcgccagtcctaaagctttggaagctacca 782
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  tatctcttccaacaggacttggtattgtctgcgccagtcctaaagctttggaagctacca 780

                                                                        
Query: 783  aaacttctaaatctctcaaagtattctttgactggaatgactaccttaagttttacaagc 842
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  aaacttctaaatctctcaaagtattctttgactggaatgactaccttaagttttacaagc 840

                                                                        
Query: 843  taggaacctattggccatacacaccttccattcaacttctctacggtcttagagctgctc 902
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  taggaacctattggccatacacaccttccattcaacttctctacggtcttagagctgctc 900

                                                                        
Query: 903  ttgatcttatctttgaggaaggacttgagaacatcatcgcccgccatgctcgtttgggaa 962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  ttgatcttatctttgaggaaggacttgagaacatcatcgcccgccatgctcgtttgggaa 960

                                                                        
Query: 963  aggccaccaggcttgcggtggaagcatgggggctgaaaaactgcacacagaaggaggaat 1022
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  aggccaccaggcttgcggtggaagcatgggggctgaaaaactgcacacagaaggaggaat 1020

                                                                        
Query: 1023 ggataagtaacacagtgacagcagttatggtgcctccgcatatagacggttcggagattg 1082
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ggataagtaacacagtgacagcagttatggtgcctccgcatatagacggttcggagattg 1080

                                                                        
Query: 1083 tgagaagggcatggcagaggtacaacttaagtcttggtcttggtctcaacaaagtggctg 1142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tgagaagggcatggcagaggtacaacttaagtcttggtcttggtctcaacaaagtggctg 1140

                                                                        
Query: 1143 gaaaggttttcagaattggacacctaggaaatgtgaatgagttgcaacttctcgggtgtc 1202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gaaaggttttcagaattggacacctaggaaatgtgaatgagttgcaacttctcgggtgtc 1200

                                                                        
Query: 1203 ttgcgggagtggagatgatactgaaggatgttggatacccagttgtaatgggaagtggag 1262
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ttgcgggagtggagatgatactgaaggatgttggatacccagttgtaatgggaagtggag 1260

                                                                        
Query: 1263 ttgcagctgcctctacttatcttcagcaccacattcctctcattccctctagaatctaat 1322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ttgcagctgcctctacttatcttcagcaccacattcctctcattccctctagaatctaat 1320

                                                                        
Query: 1323 ccatgtggtccttctctttctttctcttcctctcaatgtaaacaaactctcatgttttct 1382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ccatgtggtccttctctttctttctcttcctctcaatgtaaacaaactctcatgttttct 1380

                                                                        
Query: 1383 cttttcttcatctatatttttactacattatctatgtttttatttgctatctccaacaaa 1442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 cttttcttcatctatatttttactacattatctatgtttttatttgctatctccaacaaa 1440

                                                   
Query: 1443 cttattgaacaaaagatcaaatatgtttattactcacta 1481
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 cttattgaacaaaagatcaaatatgtttattactcacta 1479
>At2g13360.2 68415.m01475 serine-glyoxylate aminotransferase-related similar to
            serine-glyoxylate aminotransferase
            (GI:21535798)[Methylobacterium dichloromethanicum;
            contains TIGRFAM TIGR01364: phosphoserine
            aminotransferase; contains Pfam PF00266:
            aminotransferase, class V]
          Length = 1470

 Score = 2859 bits (1442), Expect = 0.0
 Identities = 1457/1462 (99%), Gaps = 5/1462 (0%)
 Strand = Plus / Plus

                                                                        
Query: 20   aaagaggtttgtgaagacgaaggagtccaaaacctccctcaggagcttccgccttattca 79
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    aaagaggtttgtgaagacgaaggagtccaaaacctccctcaggagcttccgccttattca 60

                                                                        
Query: 80   gagtgtagaggaggatccaaaagaaaagaggaaaaaatggactatatgtatggaccaggg 139
            |||     ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gag-----aggaggatccaaaagaaaagaggaaaaaatggactatatgtatggaccaggg 115

                                                                        
Query: 140  agacaccatctgtttgtaccaggaccagtgaacataccggaaccggtaatccgggcgatg 199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116  agacaccatctgtttgtaccaggaccagtgaacataccggaaccggtaatccgggcgatg 175

                                                                        
Query: 200  aaccggaacaacgaggattaccggtcaccagccattccggcgcttacgaaaacattgttg 259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176  aaccggaacaacgaggattaccggtcaccagccattccggcgcttacgaaaacattgttg 235

                                                                        
Query: 260  gaggatgttaagaagatattcaagaccacatcagggacaccttttctgtttcccacgacc 319
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236  gaggatgttaagaagatattcaagaccacatcagggacaccttttctgtttcccacgacc 295

                                                                        
Query: 320  gggactggtgcttgggagagtgccttgaccaacacgttatctcctggagacaggattgtt 379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296  gggactggtgcttgggagagtgccttgaccaacacgttatctcctggagacaggattgtt 355

                                                                        
Query: 380  tcgtttctgattggacaatttagcttgctctggattgaccagcagaagaggcttaatttc 439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356  tcgtttctgattggacaatttagcttgctctggattgaccagcagaagaggcttaatttc 415

                                                                        
Query: 440  aatgttgatgtggttgagagtgattggggacaaggtgctaatctccaagtcttggcctca 499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416  aatgttgatgtggttgagagtgattggggacaaggtgctaatctccaagtcttggcctca 475

                                                                        
Query: 500  aagctctcacaagacgagaatcataccatcaaagccatttgcattgtccacaacgagacc 559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476  aagctctcacaagacgagaatcataccatcaaagccatttgcattgtccacaacgagacc 535

                                                                        
Query: 560  gcgaccggagttaccaatgacatctctgctgtccgcacactcctcgatcactacaagcat 619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536  gcgaccggagttaccaatgacatctctgctgtccgcacactcctcgatcactacaagcat 595

                                                                        
Query: 620  ccggctttgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggat 679
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596  ccggctttgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggat 655

                                                                        
Query: 680  gagtggggagtggacgtggccttgactgggtctcagaaagccttatctcttccaacagga 739
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656  gagtggggagtggacgtggccttgactgggtctcagaaagccttatctcttccaacagga 715

                                                                        
Query: 740  cttggtattgtctgcgccagtcctaaagctttggaagctaccaaaacttctaaatctctc 799
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716  cttggtattgtctgcgccagtcctaaagctttggaagctaccaaaacttctaaatctctc 775

                                                                        
Query: 800  aaagtattctttgactggaatgactaccttaagttttacaagctaggaacctattggcca 859
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776  aaagtattctttgactggaatgactaccttaagttttacaagctaggaacctattggcca 835

                                                                        
Query: 860  tacacaccttccattcaacttctctacggtcttagagctgctcttgatcttatctttgag 919
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836  tacacaccttccattcaacttctctacggtcttagagctgctcttgatcttatctttgag 895

                                                                        
Query: 920  gaaggacttgagaacatcatcgcccgccatgctcgtttgggaaaggccaccaggcttgcg 979
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896  gaaggacttgagaacatcatcgcccgccatgctcgtttgggaaaggccaccaggcttgcg 955

                                                                        
Query: 980  gtggaagcatgggggctgaaaaactgcacacagaaggaggaatggataagtaacacagtg 1039
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956  gtggaagcatgggggctgaaaaactgcacacagaaggaggaatggataagtaacacagtg 1015

                                                                        
Query: 1040 acagcagttatggtgcctccgcatatagacggttcggagattgtgagaagggcatggcag 1099
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 acagcagttatggtgcctccgcatatagacggttcggagattgtgagaagggcatggcag 1075

                                                                        
Query: 1100 aggtacaacttaagtcttggtcttggtctcaacaaagtggctggaaaggttttcagaatt 1159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 aggtacaacttaagtcttggtcttggtctcaacaaagtggctggaaaggttttcagaatt 1135

                                                                        
Query: 1160 ggacacctaggaaatgtgaatgagttgcaacttctcgggtgtcttgcgggagtggagatg 1219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 ggacacctaggaaatgtgaatgagttgcaacttctcgggtgtcttgcgggagtggagatg 1195

                                                                        
Query: 1220 atactgaaggatgttggatacccagttgtaatgggaagtggagttgcagctgcctctact 1279
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 atactgaaggatgttggatacccagttgtaatgggaagtggagttgcagctgcctctact 1255

                                                                        
Query: 1280 tatcttcagcaccacattcctctcattccctctagaatctaatccatgtggtccttctct 1339
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1256 tatcttcagcaccacattcctctcattccctctagaatctaatccatgtggtccttctct 1315

                                                                        
Query: 1340 ttctttctcttcctctcaatgtaaacaaactctcatgttttctcttttcttcatctatat 1399
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1316 ttctttctcttcctctcaatgtaaacaaactctcatgttttctcttttcttcatctatat 1375

                                                                        
Query: 1400 ttttactacattatctatgtttttatttgctatctccaacaaacttattgaacaaaagat 1459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1376 ttttactacattatctatgtttttatttgctatctccaacaaacttattgaacaaaagat 1435

                                  
Query: 1460 caaatatgtttattactcacta 1481
            ||||||||||||||||||||||
Sbjct: 1436 caaatatgtttattactcacta 1457
>At5g60460.1 68418.m07583 sec61beta family protein similar to SP|P52870 Protein
            transport protein SEC61 beta 1 subunit {Saccharomyces
            cerevisiae}; contains Pfam profile PF03911: Sec61beta
            family
          Length = 499

 Score = 40.1 bits (20), Expect = 0.053
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1478 actaaaaaaaaaaaaaaaaa 1497
            ||||||||||||||||||||
Sbjct: 406  actaaaaaaaaaaaaaaaaa 387
>At4g09770.1 68417.m01605 meprin and TRAF homology domain-containing protein /
            MATH domain-containing protein low similarity to
            ubiquitin-specific protease 12 [Arabidopsis thaliana]
            GI:11993471; contains Pfam profile PF00917: MATH domain
          Length = 1098

 Score = 40.1 bits (20), Expect = 0.053
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1478 actaaaaaaaaaaaaaaaaa 1497
            ||||||||||||||||||||
Sbjct: 1047 actaaaaaaaaaaaaaaaaa 1028

 Score = 34.2 bits (17), Expect = 3.3
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 1481 aaaaaaaaaaaaaaaaa 1497
            |||||||||||||||||
Sbjct: 1041 aaaaaaaaaaaaaaaaa 1025

 Score = 34.2 bits (17), Expect = 3.3
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 1481 aaaaaaaaaaaaaaaaa 1497
            |||||||||||||||||
Sbjct: 1037 aaaaaaaaaaaaaaaaa 1021

 Score = 34.2 bits (17), Expect = 3.3
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 1481 aaaaaaaaaaaaaaaaa 1497
            |||||||||||||||||
Sbjct: 1040 aaaaaaaaaaaaaaaaa 1024

 Score = 34.2 bits (17), Expect = 3.3
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 1481 aaaaaaaaaaaaaaaaa 1497
            |||||||||||||||||
Sbjct: 1043 aaaaaaaaaaaaaaaaa 1027

 Score = 34.2 bits (17), Expect = 3.3
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 1481 aaaaaaaaaaaaaaaaa 1497
            |||||||||||||||||
Sbjct: 1042 aaaaaaaaaaaaaaaaa 1026

 Score = 34.2 bits (17), Expect = 3.3
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 1481 aaaaaaaaaaaaaaaaa 1497
            |||||||||||||||||
Sbjct: 1039 aaaaaaaaaaaaaaaaa 1023

 Score = 34.2 bits (17), Expect = 3.3
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 1481 aaaaaaaaaaaaaaaaa 1497
            |||||||||||||||||
Sbjct: 1038 aaaaaaaaaaaaaaaaa 1022

 Score = 34.2 bits (17), Expect = 3.3
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 1481 aaaaaaaaaaaaaaaaa 1497
            |||||||||||||||||
Sbjct: 1036 aaaaaaaaaaaaaaaaa 1020
>At3g01060.3 68416.m00009 expressed protein
          Length = 1589

 Score = 40.1 bits (20), Expect = 0.053
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1478 actaaaaaaaaaaaaaaaaa 1497
            ||||||||||||||||||||
Sbjct: 16   actaaaaaaaaaaaaaaaaa 35
  Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
    Posted date:  Jun 25, 2004 12:58 PM
  Number of letters in database: 44,058,232
  Number of sequences in database:  29,161
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 67,871
Number of Sequences: 29161
Number of extensions: 67871
Number of successful extensions: 4291
Number of sequences better than 10.0: 229
length of query: 1497
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1479
effective length of database: 43,533,334
effective search space: 64385800986
effective search space used: 64385800986
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)