BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.18072.C1
(1935 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g67540.1 68418.m08517 glycosyl hydrolase family protein ... 3832 0.0
At5g67540.2 68418.m08516 glycosyl hydrolase family protein ... 3148 0.0
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomeras... 1877 0.0
At3g49880.1 68416.m05453 glycosyl hydrolase family protein ... 484 e-135
At4g22890.3 68417.m03307 expressed protein 42 0.017
>At5g67540.1 68418.m08517 glycosyl hydrolase family protein 43 contains similarity
to xylanase GI:2645416 from [Caldicellulosiruptor
saccharolyticus]
Length = 1933
Score = 3832 bits (1933), Expect = 0.0
Identities = 1933/1933 (100%)
Strand = Plus / Plus
Query: 3 agaaaaaaaaaagaaaaaaaaatcagaggaagaagaagactagaatcgtcttcattagtc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaaaaaaaaaagaaaaaaaaatcagaggaagaagaagactagaatcgtcttcattagtc 60
Query: 63 tcgtcttcgttcacacgtctgaatcgtcaatagaactttgatagatccatttcaactaga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttcgttcacacgtctgaatcgtcaatagaactttgatagatccatttcaactaga 120
Query: 123 cttctctttactcacttctgaatctcccccaaaaaaaagaaagaatctagctctgaattt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttctctttactcacttctgaatctcccccaaaaaaaagaaagaatctagctctgaattt 180
Query: 183 ctcgattcagtttccagaccaagcttcgcatcagacagaacaaagtgtttcggatttggt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcgattcagtttccagaccaagcttcgcatcagacagaacaaagtgtttcggatttggt 240
Query: 243 gtttgctccggagaaagcgaagagagttgagaattttttgtataatttctgagattatat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttgctccggagaaagcgaagagagttgagaattttttgtataatttctgagattatat 300
Query: 303 acatgtgatgtcgggatattcgtcttctgctggcctccgaggatttgcaggaggttgcag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acatgtgatgtcgggatattcgtcttctgctggcctccgaggatttgcaggaggttgcag 360
Query: 363 atattcattgcttactattgtttggaccgtcgtcgggtttttcctggtggctcatcttat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atattcattgcttactattgtttggaccgtcgtcgggtttttcctggtggctcatcttat 420
Query: 423 ctctctgtatagcagaaaagataacaacatccatcaacaagtttcttcagatcagttaca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctctctgtatagcagaaaagataacaacatccatcaacaagtttcttcagatcagttaca 480
Query: 483 agtagtacatcatcttgctcatcctattgttcgtgaacttataagagttgaagaagaggt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agtagtacatcatcttgctcatcctattgttcgtgaacttataagagttgaagaagaggt 540
Query: 543 cctgagaatgccgccacctaggaagcgttctcctcgtactagtaaacggagatcaagaaa 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctgagaatgccgccacctaggaagcgttctcctcgtactagtaaacggagatcaagaaa 600
Query: 603 accgatccctctcgttgaggagtttcttgacgacaagtcaccaattcgacatcttttctt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 accgatccctctcgttgaggagtttcttgacgacaagtcaccaattcgacatcttttctt 660
Query: 663 tcccggtatcaaaaccgccgcttttggtcccaccaaggatatgggaaacgagacatcgta 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcccggtatcaaaaccgccgcttttggtcccaccaaggatatgggaaacgagacatcgta 720
Query: 723 ttacttccccgggaaaatttggatggacacacaagggaatccaattcaagcacatggcgg 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttacttccccgggaaaatttggatggacacacaagggaatccaattcaagcacatggcgg 780
Query: 783 agggattctgcttgacgtgaaatctaacacttactattggtatggagagtataaagatgg 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 agggattctgcttgacgtgaaatctaacacttactattggtatggagagtataaagatgg 840
Query: 843 accaacttaccatgctcacaagaaaggaccagctagagttgatattattggtgttggttg 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 accaacttaccatgctcacaagaaaggaccagctagagttgatattattggtgttggttg 900
Query: 903 ttactcttcaaaggacttatggacatggaaaaatgaaggcattgtactcggagctgagga 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ttactcttcaaaggacttatggacatggaaaaatgaaggcattgtactcggagctgagga 960
Query: 963 aacaaacaagacccatgatttgcataaatccaatgttcttgaacgacccaaagtgatcta 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aacaaacaagacccatgatttgcataaatccaatgttcttgaacgacccaaagtgatcta 1020
Query: 1023 caatgaaaagacagaaaagtatgtgatgtggatgcatatcgacgatgcaaactacactaa 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 caatgaaaagacagaaaagtatgtgatgtggatgcatatcgacgatgcaaactacactaa 1080
Query: 1083 agcttcagttggtgtggccattagcaatagcccgacaggtcctttcgagtatctatacag 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 agcttcagttggtgtggccattagcaatagcccgacaggtcctttcgagtatctatacag 1140
Query: 1143 taaacgtccacacgggttcgatagtcgggacatgactgtcttcaaagacgacgatggtgt 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 taaacgtccacacgggttcgatagtcgggacatgactgtcttcaaagacgacgatggtgt 1200
Query: 1203 tgcttacctgatatattcgtctgaagtcaatagtgtgcttcatattggacccttgacgga 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tgcttacctgatatattcgtctgaagtcaatagtgtgcttcatattggacccttgacgga 1260
Query: 1263 agattacctcgatgtgacaccggttatgaagagagtaatggtgggacaacacagggaagc 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 agattacctcgatgtgacaccggttatgaagagagtaatggtgggacaacacagggaagc 1320
Query: 1323 tccagctatcttcaagcatcagaatatttattacatggtcacttcctggtgcactggttg 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tccagctatcttcaagcatcagaatatttattacatggtcacttcctggtgcactggttg 1380
Query: 1383 ggcaccaaatgaagccttggctcatgcggctgaatctataatgggtccatgggagaaatt 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ggcaccaaatgaagccttggctcatgcggctgaatctataatgggtccatgggagaaatt 1440
Query: 1443 ggggaacccgtgtatcggtggtaacaaagttttccggttaacaacattctttgcgcagag 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ggggaacccgtgtatcggtggtaacaaagttttccggttaacaacattctttgcgcagag 1500
Query: 1503 cacttatgtgattcctttacctggtgttcccggtgcgtttatattcatggcagataggtg 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 cacttatgtgattcctttacctggtgttcccggtgcgtttatattcatggcagataggtg 1560
Query: 1563 gaacccggctgatttgcgggattccagatacgtgtggttaccgttagttataggtggacc 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gaacccggctgatttgcgggattccagatacgtgtggttaccgttagttataggtggacc 1620
Query: 1623 tgctgaccagcctttggagttcaacttcgggttcccatcgtggtccagagtgtccatcta 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 tgctgaccagcctttggagttcaacttcgggttcccatcgtggtccagagtgtccatcta 1680
Query: 1683 ctggcacagtaaatggcggctgccttaaagacatacaaataaccaaatatgttcttaccg 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 ctggcacagtaaatggcggctgccttaaagacatacaaataaccaaatatgttcttaccg 1740
Query: 1743 atccgtcagtgctgatcattgttgttgtcttgttgatttgttttgtagattaggcattca 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 atccgtcagtgctgatcattgttgttgtcttgttgatttgttttgtagattaggcattca 1800
Query: 1803 tacacaccactgtaaggattatacttaataaatctttttactgaagatacagcctcagct 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 tacacaccactgtaaggattatacttaataaatctttttactgaagatacagcctcagct 1860
Query: 1863 cttggacatcaaaggttcaatgttatacaaatgcgtttgtgacttgggctgttatacaaa 1922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 cttggacatcaaaggttcaatgttatacaaatgcgtttgtgacttgggctgttatacaaa 1920
Query: 1923 tgcttttgtgact 1935
|||||||||||||
Sbjct: 1921 tgcttttgtgact 1933
>At5g67540.2 68418.m08516 glycosyl hydrolase family protein 43 contains similarity
to xylanase GI:2645416 from [Caldicellulosiruptor
saccharolyticus]
Length = 2016
Score = 3148 bits (1588), Expect = 0.0
Identities = 1588/1588 (100%)
Strand = Plus / Plus
Query: 348 tgcaggaggttgcagatattcattgcttactattgtttggaccgtcgtcgggtttttcct 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgcaggaggttgcagatattcattgcttactattgtttggaccgtcgtcgggtttttcct 488
Query: 408 ggtggctcatcttatctctctgtatagcagaaaagataacaacatccatcaacaagtttc 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ggtggctcatcttatctctctgtatagcagaaaagataacaacatccatcaacaagtttc 548
Query: 468 ttcagatcagttacaagtagtacatcatcttgctcatcctattgttcgtgaacttataag 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttcagatcagttacaagtagtacatcatcttgctcatcctattgttcgtgaacttataag 608
Query: 528 agttgaagaagaggtcctgagaatgccgccacctaggaagcgttctcctcgtactagtaa 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agttgaagaagaggtcctgagaatgccgccacctaggaagcgttctcctcgtactagtaa 668
Query: 588 acggagatcaagaaaaccgatccctctcgttgaggagtttcttgacgacaagtcaccaat 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 acggagatcaagaaaaccgatccctctcgttgaggagtttcttgacgacaagtcaccaat 728
Query: 648 tcgacatcttttctttcccggtatcaaaaccgccgcttttggtcccaccaaggatatggg 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tcgacatcttttctttcccggtatcaaaaccgccgcttttggtcccaccaaggatatggg 788
Query: 708 aaacgagacatcgtattacttccccgggaaaatttggatggacacacaagggaatccaat 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 aaacgagacatcgtattacttccccgggaaaatttggatggacacacaagggaatccaat 848
Query: 768 tcaagcacatggcggagggattctgcttgacgtgaaatctaacacttactattggtatgg 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 tcaagcacatggcggagggattctgcttgacgtgaaatctaacacttactattggtatgg 908
Query: 828 agagtataaagatggaccaacttaccatgctcacaagaaaggaccagctagagttgatat 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 agagtataaagatggaccaacttaccatgctcacaagaaaggaccagctagagttgatat 968
Query: 888 tattggtgttggttgttactcttcaaaggacttatggacatggaaaaatgaaggcattgt 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 tattggtgttggttgttactcttcaaaggacttatggacatggaaaaatgaaggcattgt 1028
Query: 948 actcggagctgaggaaacaaacaagacccatgatttgcataaatccaatgttcttgaacg 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 actcggagctgaggaaacaaacaagacccatgatttgcataaatccaatgttcttgaacg 1088
Query: 1008 acccaaagtgatctacaatgaaaagacagaaaagtatgtgatgtggatgcatatcgacga 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 acccaaagtgatctacaatgaaaagacagaaaagtatgtgatgtggatgcatatcgacga 1148
Query: 1068 tgcaaactacactaaagcttcagttggtgtggccattagcaatagcccgacaggtccttt 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 tgcaaactacactaaagcttcagttggtgtggccattagcaatagcccgacaggtccttt 1208
Query: 1128 cgagtatctatacagtaaacgtccacacgggttcgatagtcgggacatgactgtcttcaa 1187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 cgagtatctatacagtaaacgtccacacgggttcgatagtcgggacatgactgtcttcaa 1268
Query: 1188 agacgacgatggtgttgcttacctgatatattcgtctgaagtcaatagtgtgcttcatat 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 agacgacgatggtgttgcttacctgatatattcgtctgaagtcaatagtgtgcttcatat 1328
Query: 1248 tggacccttgacggaagattacctcgatgtgacaccggttatgaagagagtaatggtggg 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1329 tggacccttgacggaagattacctcgatgtgacaccggttatgaagagagtaatggtggg 1388
Query: 1308 acaacacagggaagctccagctatcttcaagcatcagaatatttattacatggtcacttc 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 acaacacagggaagctccagctatcttcaagcatcagaatatttattacatggtcacttc 1448
Query: 1368 ctggtgcactggttgggcaccaaatgaagccttggctcatgcggctgaatctataatggg 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1449 ctggtgcactggttgggcaccaaatgaagccttggctcatgcggctgaatctataatggg 1508
Query: 1428 tccatgggagaaattggggaacccgtgtatcggtggtaacaaagttttccggttaacaac 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 tccatgggagaaattggggaacccgtgtatcggtggtaacaaagttttccggttaacaac 1568
Query: 1488 attctttgcgcagagcacttatgtgattcctttacctggtgttcccggtgcgtttatatt 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1569 attctttgcgcagagcacttatgtgattcctttacctggtgttcccggtgcgtttatatt 1628
Query: 1548 catggcagataggtggaacccggctgatttgcgggattccagatacgtgtggttaccgtt 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1629 catggcagataggtggaacccggctgatttgcgggattccagatacgtgtggttaccgtt 1688
Query: 1608 agttataggtggacctgctgaccagcctttggagttcaacttcgggttcccatcgtggtc 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1689 agttataggtggacctgctgaccagcctttggagttcaacttcgggttcccatcgtggtc 1748
Query: 1668 cagagtgtccatctactggcacagtaaatggcggctgccttaaagacatacaaataacca 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1749 cagagtgtccatctactggcacagtaaatggcggctgccttaaagacatacaaataacca 1808
Query: 1728 aatatgttcttaccgatccgtcagtgctgatcattgttgttgtcttgttgatttgttttg 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1809 aatatgttcttaccgatccgtcagtgctgatcattgttgttgtcttgttgatttgttttg 1868
Query: 1788 tagattaggcattcatacacaccactgtaaggattatacttaataaatctttttactgaa 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1869 tagattaggcattcatacacaccactgtaaggattatacttaataaatctttttactgaa 1928
Query: 1848 gatacagcctcagctcttggacatcaaaggttcaatgttatacaaatgcgtttgtgactt 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1929 gatacagcctcagctcttggacatcaaaggttcaatgttatacaaatgcgtttgtgactt 1988
Query: 1908 gggctgttatacaaatgcttttgtgact 1935
||||||||||||||||||||||||||||
Sbjct: 1989 gggctgttatacaaatgcttttgtgact 2016
Score = 694 bits (350), Expect = 0.0
Identities = 350/350 (100%)
Strand = Plus / Plus
Query: 3 agaaaaaaaaaagaaaaaaaaatcagaggaagaagaagactagaatcgtcttcattagtc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaaaaaaaaaagaaaaaaaaatcagaggaagaagaagactagaatcgtcttcattagtc 60
Query: 63 tcgtcttcgttcacacgtctgaatcgtcaatagaactttgatagatccatttcaactaga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgtcttcgttcacacgtctgaatcgtcaatagaactttgatagatccatttcaactaga 120
Query: 123 cttctctttactcacttctgaatctcccccaaaaaaaagaaagaatctagctctgaattt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttctctttactcacttctgaatctcccccaaaaaaaagaaagaatctagctctgaattt 180
Query: 183 ctcgattcagtttccagaccaagcttcgcatcagacagaacaaagtgtttcggatttggt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcgattcagtttccagaccaagcttcgcatcagacagaacaaagtgtttcggatttggt 240
Query: 243 gtttgctccggagaaagcgaagagagttgagaattttttgtataatttctgagattatat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtttgctccggagaaagcgaagagagttgagaattttttgtataatttctgagattatat 300
Query: 303 acatgtgatgtcgggatattcgtcttctgctggcctccgaggatttgcag 352
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acatgtgatgtcgggatattcgtcttctgctggcctccgaggatttgcag 350
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyclophilin-type
family protein contains Pfam domain, PF00160:
peptidyl-prolyl cis-trans isomerase, cyclophilin-type
Length = 2962
Score = 1877 bits (947), Expect = 0.0
Identities = 947/947 (100%)
Strand = Plus / Minus
Query: 989 aatccaatgttcttgaacgacccaaagtgatctacaatgaaaagacagaaaagtatgtga 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2962 aatccaatgttcttgaacgacccaaagtgatctacaatgaaaagacagaaaagtatgtga 2903
Query: 1049 tgtggatgcatatcgacgatgcaaactacactaaagcttcagttggtgtggccattagca 1108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2902 tgtggatgcatatcgacgatgcaaactacactaaagcttcagttggtgtggccattagca 2843
Query: 1109 atagcccgacaggtcctttcgagtatctatacagtaaacgtccacacgggttcgatagtc 1168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2842 atagcccgacaggtcctttcgagtatctatacagtaaacgtccacacgggttcgatagtc 2783
Query: 1169 gggacatgactgtcttcaaagacgacgatggtgttgcttacctgatatattcgtctgaag 1228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2782 gggacatgactgtcttcaaagacgacgatggtgttgcttacctgatatattcgtctgaag 2723
Query: 1229 tcaatagtgtgcttcatattggacccttgacggaagattacctcgatgtgacaccggtta 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2722 tcaatagtgtgcttcatattggacccttgacggaagattacctcgatgtgacaccggtta 2663
Query: 1289 tgaagagagtaatggtgggacaacacagggaagctccagctatcttcaagcatcagaata 1348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2662 tgaagagagtaatggtgggacaacacagggaagctccagctatcttcaagcatcagaata 2603
Query: 1349 tttattacatggtcacttcctggtgcactggttgggcaccaaatgaagccttggctcatg 1408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602 tttattacatggtcacttcctggtgcactggttgggcaccaaatgaagccttggctcatg 2543
Query: 1409 cggctgaatctataatgggtccatgggagaaattggggaacccgtgtatcggtggtaaca 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2542 cggctgaatctataatgggtccatgggagaaattggggaacccgtgtatcggtggtaaca 2483
Query: 1469 aagttttccggttaacaacattctttgcgcagagcacttatgtgattcctttacctggtg 1528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2482 aagttttccggttaacaacattctttgcgcagagcacttatgtgattcctttacctggtg 2423
Query: 1529 ttcccggtgcgtttatattcatggcagataggtggaacccggctgatttgcgggattcca 1588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2422 ttcccggtgcgtttatattcatggcagataggtggaacccggctgatttgcgggattcca 2363
Query: 1589 gatacgtgtggttaccgttagttataggtggacctgctgaccagcctttggagttcaact 1648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2362 gatacgtgtggttaccgttagttataggtggacctgctgaccagcctttggagttcaact 2303
Query: 1649 tcgggttcccatcgtggtccagagtgtccatctactggcacagtaaatggcggctgcctt 1708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2302 tcgggttcccatcgtggtccagagtgtccatctactggcacagtaaatggcggctgcctt 2243
Query: 1709 aaagacatacaaataaccaaatatgttcttaccgatccgtcagtgctgatcattgttgtt 1768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2242 aaagacatacaaataaccaaatatgttcttaccgatccgtcagtgctgatcattgttgtt 2183
Query: 1769 gtcttgttgatttgttttgtagattaggcattcatacacaccactgtaaggattatactt 1828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2182 gtcttgttgatttgttttgtagattaggcattcatacacaccactgtaaggattatactt 2123
Query: 1829 aataaatctttttactgaagatacagcctcagctcttggacatcaaaggttcaatgttat 1888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2122 aataaatctttttactgaagatacagcctcagctcttggacatcaaaggttcaatgttat 2063
Query: 1889 acaaatgcgtttgtgacttgggctgttatacaaatgcttttgtgact 1935
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2062 acaaatgcgtttgtgacttgggctgttatacaaatgcttttgtgact 2016
Score = 46.1 bits (23), Expect = 0.001
Identities = 43/49 (87%), Gaps = 3/49 (6%)
Strand = Plus / Minus
Query: 1864 ttggacatcaaaggttcaatgtt---atacaaatgcgtttgtgacttgg 1909
|||||||||||||| ||| |||| |||||||||| ||||||||||||
Sbjct: 1968 ttggacatcaaaggctcagtgttgtcatacaaatgcttttgtgacttgg 1920
Score = 42.1 bits (21), Expect = 0.017
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1883 tgttatacaaatgcgtttgtgactt 1907
|||||||||||||| ||||||||||
Sbjct: 2039 tgttatacaaatgcttttgtgactt 2015
Score = 40.1 bits (20), Expect = 0.069
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1916 atacaaatgcttttgtgact 1935
||||||||||||||||||||
Sbjct: 1942 atacaaatgcttttgtgact 1923
>At3g49880.1 68416.m05453 glycosyl hydrolase family protein 43 contains similarity
to xylanase GI:2645416 from [Caldicellulosiruptor
saccharolyticus]
Length = 2066
Score = 484 bits (244), Expect = e-135
Identities = 724/884 (81%)
Strand = Plus / Plus
Query: 724 tacttccccgggaaaatttggatggacacacaagggaatccaattcaagcacatggcgga 783
|||||||| |||| |||||||| ||||| |||||||||| ||||||||||| || ||
Sbjct: 741 tacttcccggggagaatttggacagacacggaagggaatccgattcaagcacacggtggt 800
Query: 784 gggattctgcttgacgtgaaatctaacacttactattggtatggagagtataaagatgga 843
|| ||| || |||| | | ||| || ||||||||||||||| || ||||||||||||
Sbjct: 801 ggcattttgtttgatgacatatcaaaggtttactattggtatggtgaatataaagatgga 860
Query: 844 ccaacttaccatgctcacaagaaaggaccagctagagttgatattattggtgttggttgt 903
|||||||| | | ||||||||||||| | |||||||||||||| || |||||||| |||
Sbjct: 861 ccaacttatctttctcacaagaaaggtgctgctagagttgatataatcggtgttggatgt 920
Query: 904 tactcttcaaaggacttatggacatggaaaaatgaaggcattgtactcggagctgaggaa 963
||||| || || || ||||||||||||||||| ||||| ||||| | | ||| || |||
Sbjct: 921 tactcgtcgaaagatttatggacatggaaaaacgaaggtgttgtattagcagccgaagaa 980
Query: 964 acaaacaagacccatgatttgcataaatccaatgttcttgaacgacccaaagtgatctac 1023
||| | |||| ||||| || || ||||||||||||||||| || || |||||||| |||
Sbjct: 981 acagatgagacacatgacttacacaaatccaatgttcttgagcgtcctaaagtgatatac 1040
Query: 1024 aatgaaaagacagaaaagtatgtgatgtggatgcatatcgacgatgcaaactacactaaa 1083
||| | | |||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 aattcagatacaggtaagtacgtgatgtggatgcatatcgacgatgcaaactacactaaa 1100
Query: 1084 gcttcagttggtgtggccattagcaatagcccgacaggtcctttcgagtatctatacagt 1143
||||| |||||||| ||||||||| ||| ||| |||||||| ||||| || |||||||
Sbjct: 1101 gcttcggttggtgtagccattagcgataacccaacaggtccattcgattacttatacagc 1160
Query: 1144 aaacgtccacacgggttcgatagtcgggacatgactgtcttcaaagacgacgatggtgtt 1203
| | ||||||||||| |||||| | |||||||| |||| ||||||||| ||| ||
Sbjct: 1161 agatcgccacacgggtttgatagtagagacatgacagtctacaaagacgatgataacgta 1220
Query: 1204 gcttacctgatatattcgtctgaagtcaatagtgtgcttcatattggacccttgacggaa 1263
|| ||| |||||||||| || || | ||| || ||||| ||||| || ||| |||| ||
Sbjct: 1221 gcctacttgatatattcatcagaggacaacagcgtgctgcatatcggtcccctgaccgag 1280
Query: 1264 gattacctcgatgtgacaccggttatgaagagagtaatggtgggacaacacagggaagct 1323
||||||||||||||| ||||| ||||||||| | ||||||||||||||||| ||||||
Sbjct: 1281 aattacctcgatgtgaagccggtaatgaagagaatcatggtgggacaacacagagaagct 1340
Query: 1324 ccagctatcttcaagcatcagaatatttattacatggtcacttcctggtgcactggttgg 1383
|| ||||||||||| ||||| || | ||| |||||| |||| || | ||||| || |||
Sbjct: 1341 ccggctatcttcaaacatcaaaacacttactacatgatcacgtctggttgcaccggatgg 1400
Query: 1384 gcaccaaatgaagccttggctcatgcggctgaatctataatgggtccatgggagaaattg 1443
|||||||| ||||| || |||||||| ||||| || ||||||||||| ||||||| |||
Sbjct: 1401 gcaccaaacgaagcattagctcatgccgctgagtcgataatgggtccgtgggagacatta 1460
Query: 1444 gggaacccgtgtatcggtggtaacaaagttttccggttaacaacattctttgcgcagagc 1503
||||| || ||| | || || |||| ||||||| | || || || || |||||||||
Sbjct: 1461 gggaatccatgtgttggcgggaacagtattttccgttcgacgacgtttttcgcgcagagc 1520
Query: 1504 acttatgtgattcctttacctggtgttcccggtgcgtttatattcatggcagataggtgg 1563
|| | |||||||| ||||| |||||||| |||| ||||||||| ||||| |||||||||
Sbjct: 1521 acgttcgtgattccgttaccaggtgttcctggtgtgtttatatttatggccgataggtgg 1580
Query: 1564 aacccggctgatttgcgggattccagatacgtgtggttaccgtt 1607
|| ||||| |||||||| ||||| ||||| |||||||||||||
Sbjct: 1581 aatccggcggatttgcgagattcgagatatttgtggttaccgtt 1624
Score = 52.0 bits (26), Expect = 2e-05
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 550 atgccgccacctaggaagcgttctcctcgtactagtaaacggagatcaagaaaaccgatc 609
|||||||| |||||||||||||||||||| ||| ||||||| | ||| || ||| | |
Sbjct: 567 atgccgcctcctaggaagcgttctcctcgcgctatcaaacggaaaccaaaaacaccaacc 626
Query: 610 cctctcgttgaggagtttcttgacgacaagtcaccaattcgacatctttt 659
|| | || || |||||||| ||||| || |||| ||||||||||||||
Sbjct: 627 actttagtcgaagagtttctcgacgagaattcacagattcgacatctttt 676
>At4g22890.3 68417.m03307 expressed protein
Length = 1413
Score = 42.1 bits (21), Expect = 0.017
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 5 aaaaaaaaaagaaaaaaaaatcaga 29
|||||||||| ||||||||||||||
Sbjct: 42 aaaaaaaaaaaaaaaaaaaatcaga 66
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 76,600
Number of Sequences: 29161
Number of extensions: 76600
Number of successful extensions: 2845
Number of sequences better than 10.0: 143
length of query: 1935
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1917
effective length of database: 43,533,334
effective search space: 83453401278
effective search space used: 83453401278
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)