BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.18066.C1
(1388 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g67480.1 68418.m08509 TAZ zinc finger family protein / B... 2726 0.0
At5g67480.2 68418.m08510 TAZ zinc finger family protein / B... 2488 0.0
At4g37610.1 68417.m05321 TAZ zinc finger family protein / B... 64 3e-09
At1g27320.1 68414.m03328 histidine kinase (AHK3) identical ... 40 0.049
At5g15020.1 68418.m01761 paired amphipathic helix repeat-co... 38 0.19
>At5g67480.1 68418.m08509 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 : BTB/POZ
domain; contains Pfam PF02135 : TAZ zinc finger; simiar
to Chain A, Taz2 Domain Of The Transcriptional Adaptor
Protein Cbp (GI:11514507) [Homo sapiens]; similar to
(SP:Q09472) E1A-associated protein p300 (SP:Q09472) [Homo
sapiens]; similar to histone acetyltransferase HAC4
(GI:21105785) [Arabidopsis thaliana]
Length = 1385
Score = 2726 bits (1375), Expect = 0.0
Identities = 1381/1383 (99%)
Strand = Plus / Plus
Query: 2 aagcttctctatagagagagtttcttctcatgctctttctaccaaggagaagattttctc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aagcttctctatagagagagtttcttctcatgctctttctaccaaggagaagattttctc 61
Query: 62 gttaattttgtttgacttgcctcttcgaagcaacctgattctgtggtctgaatcttttca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gttaattttgtttgacttgcctcttcgaagcaacctgattctgtggtctgaatcttttca 121
Query: 122 agggaagagaagataagctaaacaagagaatggtgacaggttgtgttgatcttcatcaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agggaagagaagataagctaaacaagagaatggtgacaggttgtgttgatcttcatcaat 181
Query: 182 ctttcaaatctgcagattcatcttctgtgccaattcctcctcctcttccatcaaaatctg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctttcaaatctgcagattcatcttctgtgccaattcctcctcctcttccatcaaaatctg 241
Query: 242 atggactcaagaaaaaacttgggcatagcagcgtttcgacagccacaagagatatgtggg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atggactcaagaaaaaacttgggcatagcagcgtttcgacagccacaagagatatgtggg 301
Query: 302 atcgtcttttcaatgacggatacaaagctgatgtagtcatctatacagataatggcagta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atcgtcttttcaatgacggatacaaagctgatgtagtcatctatacagataatggcagta 361
Query: 362 tcatctatgctcatgccaacatccttggaactgcttccactgtgatcaaaggcatgttga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcatctatgctcatgccaacatccttggaactgcttccactgtgatcaaaggcatgttga 421
Query: 422 agcaagccaagagacatggcaagtggcatacaatctcaatccgtggtgtccctcatgatg 481
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 422 agcaagccaagagacatggcaagtggcatacaatatcaatccgaggtgtccctcatgatg 481
Query: 482 ctgtgcgagtttttatccgtttcctctactcttcttgctatgagaaagaagaaatgaacg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctgtgcgagtttttatccgtttcctctactcttcttgctatgagaaagaagaaatgaacg 541
Query: 542 agtttatcatgcatttgctacttctgtcacacgcgtacgtggttcctcagctgaaacggg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agtttatcatgcatttgctacttctgtcacacgcgtacgtggttcctcagctgaaacggg 601
Query: 602 tctgtgaatggcatctagaacatggtttgcttaccactgagaatgtggttgatgtgttcc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tctgtgaatggcatctagaacatggtttgcttaccactgagaatgtggttgatgtgttcc 661
Query: 662 agcttgcgctgctgtgtgatttccctcggcttagcctcatatctcaccgtatgatcatga 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agcttgcgctgctgtgtgatttccctcggcttagcctcatatctcaccgtatgatcatga 721
Query: 722 aacactttaacgaactctctgcgacagaagcatggacagctatgaagaaaagccatccct 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aacactttaacgaactctctgcgacagaagcatggacagctatgaagaaaagccatccct 781
Query: 782 ttcttgagaaagaagttagagactcagtaatcatcgaagcaaatacgcggaaagagagga 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttcttgagaaagaagttagagactcagtaatcatcgaagcaaatacgcggaaagagagga 841
Query: 842 tgagaaaacgcaatgatcagaggatatattcgcagctatacgaagcaatggaagcacttg 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tgagaaaacgcaatgatcagaggatatattcgcagctatacgaagcaatggaagcacttg 901
Query: 902 ttcatatatgcagagatggatgtaaaacaatagggccacacgataaagatttcaaaccga 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ttcatatatgcagagatggatgtaaaacaatagggccacacgataaagatttcaaaccga 961
Query: 962 accatgcaacgtgtaactatgaagcttgcaagggattagaatcactgatccggcatttcg 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 accatgcaacgtgtaactatgaagcttgcaagggattagaatcactgatccggcatttcg 1021
Query: 1022 caggctgtaagctaagagttccaggaggttgcgtgcattgcaagagaatgtggcaactcc 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 caggctgtaagctaagagttccaggaggttgcgtgcattgcaagagaatgtggcaactcc 1081
Query: 1082 ttgaactgcattcacgtgtttgcgcaggttctgatcaatgtcgagtccctctatgcagaa 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ttgaactgcattcacgtgtttgcgcaggttctgatcaatgtcgagtccctctatgcagaa 1141
Query: 1142 accttaaggagaagatggagaaacagagcaagaaagatgagtcgagatggaaacttctgg 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 accttaaggagaagatggagaaacagagcaagaaagatgagtcgagatggaaacttctgg 1201
Query: 1202 tgaagaatgtattggggagtaagaaaatcggaggctctcctttctttttaccggtgacaa 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 tgaagaatgtattggggagtaagaaaatcggaggctctcctttctttttaccggtgacaa 1261
Query: 1262 actgttaaaaaacattttgtcaatctcaagaagggcgagttttaagcgtttcttgtgatc 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 actgttaaaaaacattttgtcaatctcaagaagggcgagttttaagcgtttcttgtgatc 1321
Query: 1322 ctatctttaaaacaagtgtaacataatgagtttgaataaatgacacatattttggtcggc 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 ctatctttaaaacaagtgtaacataatgagtttgaataaatgacacatattttggtcggc 1381
Query: 1382 caa 1384
|||
Sbjct: 1382 caa 1384
>At5g67480.2 68418.m08510 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 : BTB/POZ
domain; contains Pfam PF02135 : TAZ zinc finger; simiar
to Chain A, Taz2 Domain Of The Transcriptional Adaptor
Protein Cbp (GI:11514507) [Homo sapiens]; similar to
(SP:Q09472) E1A-associated protein p300 (SP:Q09472) [Homo
sapiens]; similar to histone acetyltransferase HAC4
(GI:21105785) [Arabidopsis thaliana]
Length = 1494
Score = 2488 bits (1255), Expect = 0.0
Identities = 1261/1263 (99%)
Strand = Plus / Plus
Query: 122 agggaagagaagataagctaaacaagagaatggtgacaggttgtgttgatcttcatcaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 agggaagagaagataagctaaacaagagaatggtgacaggttgtgttgatcttcatcaat 291
Query: 182 ctttcaaatctgcagattcatcttctgtgccaattcctcctcctcttccatcaaaatctg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ctttcaaatctgcagattcatcttctgtgccaattcctcctcctcttccatcaaaatctg 351
Query: 242 atggactcaagaaaaaacttgggcatagcagcgtttcgacagccacaagagatatgtggg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 atggactcaagaaaaaacttgggcatagcagcgtttcgacagccacaagagatatgtggg 411
Query: 302 atcgtcttttcaatgacggatacaaagctgatgtagtcatctatacagataatggcagta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atcgtcttttcaatgacggatacaaagctgatgtagtcatctatacagataatggcagta 471
Query: 362 tcatctatgctcatgccaacatccttggaactgcttccactgtgatcaaaggcatgttga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tcatctatgctcatgccaacatccttggaactgcttccactgtgatcaaaggcatgttga 531
Query: 422 agcaagccaagagacatggcaagtggcatacaatctcaatccgtggtgtccctcatgatg 481
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 532 agcaagccaagagacatggcaagtggcatacaatatcaatccgaggtgtccctcatgatg 591
Query: 482 ctgtgcgagtttttatccgtttcctctactcttcttgctatgagaaagaagaaatgaacg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ctgtgcgagtttttatccgtttcctctactcttcttgctatgagaaagaagaaatgaacg 651
Query: 542 agtttatcatgcatttgctacttctgtcacacgcgtacgtggttcctcagctgaaacggg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agtttatcatgcatttgctacttctgtcacacgcgtacgtggttcctcagctgaaacggg 711
Query: 602 tctgtgaatggcatctagaacatggtttgcttaccactgagaatgtggttgatgtgttcc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tctgtgaatggcatctagaacatggtttgcttaccactgagaatgtggttgatgtgttcc 771
Query: 662 agcttgcgctgctgtgtgatttccctcggcttagcctcatatctcaccgtatgatcatga 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 agcttgcgctgctgtgtgatttccctcggcttagcctcatatctcaccgtatgatcatga 831
Query: 722 aacactttaacgaactctctgcgacagaagcatggacagctatgaagaaaagccatccct 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 aacactttaacgaactctctgcgacagaagcatggacagctatgaagaaaagccatccct 891
Query: 782 ttcttgagaaagaagttagagactcagtaatcatcgaagcaaatacgcggaaagagagga 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 ttcttgagaaagaagttagagactcagtaatcatcgaagcaaatacgcggaaagagagga 951
Query: 842 tgagaaaacgcaatgatcagaggatatattcgcagctatacgaagcaatggaagcacttg 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 tgagaaaacgcaatgatcagaggatatattcgcagctatacgaagcaatggaagcacttg 1011
Query: 902 ttcatatatgcagagatggatgtaaaacaatagggccacacgataaagatttcaaaccga 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 ttcatatatgcagagatggatgtaaaacaatagggccacacgataaagatttcaaaccga 1071
Query: 962 accatgcaacgtgtaactatgaagcttgcaagggattagaatcactgatccggcatttcg 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 accatgcaacgtgtaactatgaagcttgcaagggattagaatcactgatccggcatttcg 1131
Query: 1022 caggctgtaagctaagagttccaggaggttgcgtgcattgcaagagaatgtggcaactcc 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 caggctgtaagctaagagttccaggaggttgcgtgcattgcaagagaatgtggcaactcc 1191
Query: 1082 ttgaactgcattcacgtgtttgcgcaggttctgatcaatgtcgagtccctctatgcagaa 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 ttgaactgcattcacgtgtttgcgcaggttctgatcaatgtcgagtccctctatgcagaa 1251
Query: 1142 accttaaggagaagatggagaaacagagcaagaaagatgagtcgagatggaaacttctgg 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 accttaaggagaagatggagaaacagagcaagaaagatgagtcgagatggaaacttctgg 1311
Query: 1202 tgaagaatgtattggggagtaagaaaatcggaggctctcctttctttttaccggtgacaa 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1312 tgaagaatgtattggggagtaagaaaatcggaggctctcctttctttttaccggtgacaa 1371
Query: 1262 actgttaaaaaacattttgtcaatctcaagaagggcgagttttaagcgtttcttgtgatc 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1372 actgttaaaaaacattttgtcaatctcaagaagggcgagttttaagcgtttcttgtgatc 1431
Query: 1322 ctatctttaaaacaagtgtaacataatgagtttgaataaatgacacatattttggtcggc 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1432 ctatctttaaaacaagtgtaacataatgagtttgaataaatgacacatattttggtcggc 1491
Query: 1382 caa 1384
|||
Sbjct: 1492 caa 1494
>At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 : BTB/POZ
domain; contains Pfam PF02135 : TAZ zinc finger; similar
to Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 1425
Score = 63.9 bits (32), Expect = 3e-09
Identities = 152/192 (79%)
Strand = Plus / Plus
Query: 1059 ttgcaagagaatgtggcaactccttgaactgcattcacgtgtttgcgcaggttctgatca 1118
|||||||||||||||||| || ||||| || ||||| || |||||| || || || ||
Sbjct: 1084 ttgcaagagaatgtggcagcttcttgagcttcattcgcgcatttgcgtagactcggaaca 1143
Query: 1119 atgtcgagtccctctatgcagaaaccttaaggagaagatggagaaacagagcaagaaaga 1178
||| ||||||||| ||||| | | || |||| |||| ||| |||||||| ||||||
Sbjct: 1144 atgcaaagtccctctttgcagtagtttgaaagagaggatgaagacacagagcaggaaaga 1203
Query: 1179 tgagtcgagatggaaacttctggtgaagaatgtattggggagtaagaaaatcggaggctc 1238
|||| |||||||||||| |||||| |||||| ||| | | |||| ||| ||||| ||
Sbjct: 1204 tgagaaaagatggaaacttttggtgaggaatgttttgagcaccaagagaattggaggatc 1263
Query: 1239 tcctttcttttt 1250
||| ||||||||
Sbjct: 1264 tccattcttttt 1275
Score = 52.0 bits (26), Expect = 1e-05
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 874 cagctatacgaagcaatggaagcacttgttcatatatgcagagatggatg 923
||||| || ||||||||||| || ||||||||||||| |||||||||||
Sbjct: 902 cagctctatgaagcaatggaggcttttgttcatatatgtagagatggatg 951
Score = 46.1 bits (23), Expect = 8e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 487 cgagtttttatccgtttcctctactcttcttgctatgagaaagaaga 533
|||||||| || || ||| | ||||||||||||||||||||| ||||
Sbjct: 515 cgagttttcattcgattcttatactcttcttgctatgagaaacaaga 561
>At1g27320.1 68414.m03328 histidine kinase (AHK3) identical to histidine kinase
AHK3 [Arabidopsis thaliana] gi|13537198|dbj|BAB40775
Length = 3283
Score = 40.1 bits (20), Expect = 0.049
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 37 tttctaccaaggagaagatt 56
||||||||||||||||||||
Sbjct: 2672 tttctaccaaggagaagatt 2653
>At5g15020.1 68418.m01761 paired amphipathic helix repeat-containing protein
similar to transcription co-repressor Sin3 [Xenopus
laevis] GI:4960210; contains Pfam profile PF02671: Paired
amphipathic helix repeat
Length = 4404
Score = 38.2 bits (19), Expect = 0.19
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1152 gaagatggagaaacagagcaaga 1174
|||||||||||| ||||||||||
Sbjct: 859 gaagatggagaagcagagcaaga 881
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 55,899
Number of Sequences: 29161
Number of extensions: 55899
Number of successful extensions: 1535
Number of sequences better than 10.0: 41
length of query: 1388
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1370
effective length of database: 43,533,334
effective search space: 59640667580
effective search space used: 59640667580
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)