BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AF446873.F
(1119 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g67480.2 68418.m08510 TAZ zinc finger family protein / B... 2218 0.0
At5g67480.1 68418.m08509 TAZ zinc finger family protein / B... 2218 0.0
At4g37610.1 68417.m05321 TAZ zinc finger family protein / B... 64 3e-09
At5g15020.1 68418.m01761 paired amphipathic helix repeat-co... 38 0.16
At3g02400.1 68416.m00227 forkhead-associated domain-contain... 38 0.16
>At5g67480.2 68418.m08510 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 : BTB/POZ
domain; contains Pfam PF02135 : TAZ zinc finger; simiar
to Chain A, Taz2 Domain Of The Transcriptional Adaptor
Protein Cbp (GI:11514507) [Homo sapiens]; similar to
(SP:Q09472) E1A-associated protein p300 (SP:Q09472) [Homo
sapiens]; similar to histone acetyltransferase HAC4
(GI:21105785) [Arabidopsis thaliana]
Length = 1494
Score = 2218 bits (1119), Expect = 0.0
Identities = 1119/1119 (100%)
Strand = Plus / Plus
Query: 1 atggtgacaggttgtgttgatcttcatcaatctttcaaatctgcagattcatcttctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggtgacaggttgtgttgatcttcatcaatctttcaaatctgcagattcatcttctgtg 320
Query: 61 ccaattcctcctcctcttccatcaaaatctgatggactcaagaaaaaacttgggcatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaattcctcctcctcttccatcaaaatctgatggactcaagaaaaaacttgggcatagc 380
Query: 121 agcgtttcgacagccacaagagatatgtgggatcgtcttttcaatgacggatacaaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcgtttcgacagccacaagagatatgtgggatcgtcttttcaatgacggatacaaagct 440
Query: 181 gatgtagtcatctatacagataatggcagtatcatctatgctcatgccaacatccttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgtagtcatctatacagataatggcagtatcatctatgctcatgccaacatccttgga 500
Query: 241 actgcttccactgtgatcaaaggcatgttgaagcaagccaagagacatggcaagtggcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgcttccactgtgatcaaaggcatgttgaagcaagccaagagacatggcaagtggcat 560
Query: 301 acaatatcaatccgaggtgtccctcatgatgctgtgcgagtttttatccgtttcctctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaatatcaatccgaggtgtccctcatgatgctgtgcgagtttttatccgtttcctctac 620
Query: 361 tcttcttgctatgagaaagaagaaatgaacgagtttatcatgcatttgctacttctgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcttcttgctatgagaaagaagaaatgaacgagtttatcatgcatttgctacttctgtca 680
Query: 421 cacgcgtacgtggttcctcagctgaaacgggtctgtgaatggcatctagaacatggtttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacgcgtacgtggttcctcagctgaaacgggtctgtgaatggcatctagaacatggtttg 740
Query: 481 cttaccactgagaatgtggttgatgtgttccagcttgcgctgctgtgtgatttccctcgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttaccactgagaatgtggttgatgtgttccagcttgcgctgctgtgtgatttccctcgg 800
Query: 541 cttagcctcatatctcaccgtatgatcatgaaacactttaacgaactctctgcgacagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttagcctcatatctcaccgtatgatcatgaaacactttaacgaactctctgcgacagaa 860
Query: 601 gcatggacagctatgaagaaaagccatccctttcttgagaaagaagttagagactcagta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 gcatggacagctatgaagaaaagccatccctttcttgagaaagaagttagagactcagta 920
Query: 661 atcatcgaagcaaatacgcggaaagagaggatgagaaaacgcaatgatcagaggatatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 atcatcgaagcaaatacgcggaaagagaggatgagaaaacgcaatgatcagaggatatat 980
Query: 721 tcgcagctatacgaagcaatggaagcacttgttcatatatgcagagatggatgtaaaaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 tcgcagctatacgaagcaatggaagcacttgttcatatatgcagagatggatgtaaaaca 1040
Query: 781 atagggccacacgataaagatttcaaaccgaaccatgcaacgtgtaactatgaagcttgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 atagggccacacgataaagatttcaaaccgaaccatgcaacgtgtaactatgaagcttgc 1100
Query: 841 aagggattagaatcactgatccggcatttcgcaggctgtaagctaagagttccaggaggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 aagggattagaatcactgatccggcatttcgcaggctgtaagctaagagttccaggaggt 1160
Query: 901 tgcgtgcattgcaagagaatgtggcaactccttgaactgcattcacgtgtttgcgcaggt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1161 tgcgtgcattgcaagagaatgtggcaactccttgaactgcattcacgtgtttgcgcaggt 1220
Query: 961 tctgatcaatgtcgagtccctctatgcagaaaccttaaggagaagatggagaaacagagc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 tctgatcaatgtcgagtccctctatgcagaaaccttaaggagaagatggagaaacagagc 1280
Query: 1021 aagaaagatgagtcgagatggaaacttctggtgaagaatgtattggggagtaagaaaatc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 aagaaagatgagtcgagatggaaacttctggtgaagaatgtattggggagtaagaaaatc 1340
Query: 1081 ggaggctctcctttctttttaccggtgacaaactgttaa 1119
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 ggaggctctcctttctttttaccggtgacaaactgttaa 1379
>At5g67480.1 68418.m08509 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 : BTB/POZ
domain; contains Pfam PF02135 : TAZ zinc finger; simiar
to Chain A, Taz2 Domain Of The Transcriptional Adaptor
Protein Cbp (GI:11514507) [Homo sapiens]; similar to
(SP:Q09472) E1A-associated protein p300 (SP:Q09472) [Homo
sapiens]; similar to histone acetyltransferase HAC4
(GI:21105785) [Arabidopsis thaliana]
Length = 1385
Score = 2218 bits (1119), Expect = 0.0
Identities = 1119/1119 (100%)
Strand = Plus / Plus
Query: 1 atggtgacaggttgtgttgatcttcatcaatctttcaaatctgcagattcatcttctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atggtgacaggttgtgttgatcttcatcaatctttcaaatctgcagattcatcttctgtg 210
Query: 61 ccaattcctcctcctcttccatcaaaatctgatggactcaagaaaaaacttgggcatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ccaattcctcctcctcttccatcaaaatctgatggactcaagaaaaaacttgggcatagc 270
Query: 121 agcgtttcgacagccacaagagatatgtgggatcgtcttttcaatgacggatacaaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agcgtttcgacagccacaagagatatgtgggatcgtcttttcaatgacggatacaaagct 330
Query: 181 gatgtagtcatctatacagataatggcagtatcatctatgctcatgccaacatccttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gatgtagtcatctatacagataatggcagtatcatctatgctcatgccaacatccttgga 390
Query: 241 actgcttccactgtgatcaaaggcatgttgaagcaagccaagagacatggcaagtggcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 actgcttccactgtgatcaaaggcatgttgaagcaagccaagagacatggcaagtggcat 450
Query: 301 acaatatcaatccgaggtgtccctcatgatgctgtgcgagtttttatccgtttcctctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 acaatatcaatccgaggtgtccctcatgatgctgtgcgagtttttatccgtttcctctac 510
Query: 361 tcttcttgctatgagaaagaagaaatgaacgagtttatcatgcatttgctacttctgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tcttcttgctatgagaaagaagaaatgaacgagtttatcatgcatttgctacttctgtca 570
Query: 421 cacgcgtacgtggttcctcagctgaaacgggtctgtgaatggcatctagaacatggtttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cacgcgtacgtggttcctcagctgaaacgggtctgtgaatggcatctagaacatggtttg 630
Query: 481 cttaccactgagaatgtggttgatgtgttccagcttgcgctgctgtgtgatttccctcgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 cttaccactgagaatgtggttgatgtgttccagcttgcgctgctgtgtgatttccctcgg 690
Query: 541 cttagcctcatatctcaccgtatgatcatgaaacactttaacgaactctctgcgacagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cttagcctcatatctcaccgtatgatcatgaaacactttaacgaactctctgcgacagaa 750
Query: 601 gcatggacagctatgaagaaaagccatccctttcttgagaaagaagttagagactcagta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gcatggacagctatgaagaaaagccatccctttcttgagaaagaagttagagactcagta 810
Query: 661 atcatcgaagcaaatacgcggaaagagaggatgagaaaacgcaatgatcagaggatatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 atcatcgaagcaaatacgcggaaagagaggatgagaaaacgcaatgatcagaggatatat 870
Query: 721 tcgcagctatacgaagcaatggaagcacttgttcatatatgcagagatggatgtaaaaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 tcgcagctatacgaagcaatggaagcacttgttcatatatgcagagatggatgtaaaaca 930
Query: 781 atagggccacacgataaagatttcaaaccgaaccatgcaacgtgtaactatgaagcttgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 atagggccacacgataaagatttcaaaccgaaccatgcaacgtgtaactatgaagcttgc 990
Query: 841 aagggattagaatcactgatccggcatttcgcaggctgtaagctaagagttccaggaggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 aagggattagaatcactgatccggcatttcgcaggctgtaagctaagagttccaggaggt 1050
Query: 901 tgcgtgcattgcaagagaatgtggcaactccttgaactgcattcacgtgtttgcgcaggt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 tgcgtgcattgcaagagaatgtggcaactccttgaactgcattcacgtgtttgcgcaggt 1110
Query: 961 tctgatcaatgtcgagtccctctatgcagaaaccttaaggagaagatggagaaacagagc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 tctgatcaatgtcgagtccctctatgcagaaaccttaaggagaagatggagaaacagagc 1170
Query: 1021 aagaaagatgagtcgagatggaaacttctggtgaagaatgtattggggagtaagaaaatc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 aagaaagatgagtcgagatggaaacttctggtgaagaatgtattggggagtaagaaaatc 1230
Query: 1081 ggaggctctcctttctttttaccggtgacaaactgttaa 1119
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 ggaggctctcctttctttttaccggtgacaaactgttaa 1269
>At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 : BTB/POZ
domain; contains Pfam PF02135 : TAZ zinc finger; similar
to Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 1425
Score = 63.9 bits (32), Expect = 3e-09
Identities = 152/192 (79%)
Strand = Plus / Plus
Query: 909 ttgcaagagaatgtggcaactccttgaactgcattcacgtgtttgcgcaggttctgatca 968
|||||||||||||||||| || ||||| || ||||| || |||||| || || || ||
Sbjct: 1084 ttgcaagagaatgtggcagcttcttgagcttcattcgcgcatttgcgtagactcggaaca 1143
Query: 969 atgtcgagtccctctatgcagaaaccttaaggagaagatggagaaacagagcaagaaaga 1028
||| ||||||||| ||||| | | || |||| |||| ||| |||||||| ||||||
Sbjct: 1144 atgcaaagtccctctttgcagtagtttgaaagagaggatgaagacacagagcaggaaaga 1203
Query: 1029 tgagtcgagatggaaacttctggtgaagaatgtattggggagtaagaaaatcggaggctc 1088
|||| |||||||||||| |||||| |||||| ||| | | |||| ||| ||||| ||
Sbjct: 1204 tgagaaaagatggaaacttttggtgaggaatgttttgagcaccaagagaattggaggatc 1263
Query: 1089 tcctttcttttt 1100
||| ||||||||
Sbjct: 1264 tccattcttttt 1275
Score = 52.0 bits (26), Expect = 1e-05
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 724 cagctatacgaagcaatggaagcacttgttcatatatgcagagatggatg 773
||||| || ||||||||||| || ||||||||||||| |||||||||||
Sbjct: 902 cagctctatgaagcaatggaggcttttgttcatatatgtagagatggatg 951
Score = 46.1 bits (23), Expect = 6e-04
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 337 cgagtttttatccgtttcctctactcttcttgctatgagaaagaaga 383
|||||||| || || ||| | ||||||||||||||||||||| ||||
Sbjct: 515 cgagttttcattcgattcttatactcttcttgctatgagaaacaaga 561
>At5g15020.1 68418.m01761 paired amphipathic helix repeat-containing protein
similar to transcription co-repressor Sin3 [Xenopus
laevis] GI:4960210; contains Pfam profile PF02671: Paired
amphipathic helix repeat
Length = 4404
Score = 38.2 bits (19), Expect = 0.16
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1002 gaagatggagaaacagagcaaga 1024
|||||||||||| ||||||||||
Sbjct: 859 gaagatggagaagcagagcaaga 881
>At3g02400.1 68416.m00227 forkhead-associated domain-containing protein / FHA
domain-containing protein / AT hook motif-containing
protein contains Pfam profiles PF00498: FHA domain,
PF02178: AT hook motif
Length = 1758
Score = 38.2 bits (19), Expect = 0.16
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1001 agaagatggagaaacagag 1019
|||||||||||||||||||
Sbjct: 1242 agaagatggagaaacagag 1260
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 42,992
Number of Sequences: 29161
Number of extensions: 42992
Number of successful extensions: 1230
Number of sequences better than 10.0: 124
length of query: 1119
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1101
effective length of database: 43,533,334
effective search space: 47930200734
effective search space used: 47930200734
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)