BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.16479.C1
(2048 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g46110.1 68418.m05669 phosphate/triose-phosphate translo... 4060 0.0
At5g46110.2 68418.m05670 phosphate/triose-phosphate translo... 4022 0.0
At3g46590.1 68416.m05057 telomere repeat-binding protein, p... 40 0.073
At5g57450.2 68418.m07178 DNA repair family protein contains... 38 0.29
At5g57450.1 68418.m07177 DNA repair family protein contains... 38 0.29
>At5g46110.1 68418.m05669 phosphate/triose-phosphate translocator, putative
identical to phosphate/triose-phosphate translocator
precursor [Arabidopsis thaliana] gi|3983125|gb|AAC83815;
similar to triose phosphate/phosphate translocator,
chloroplast precursor (CTPT)[Cauliflower]{Brassica
oleracea} SWISS-PROT:P52177
Length = 2048
Score = 4060 bits (2048), Expect = 0.0
Identities = 2048/2048 (100%)
Strand = Plus / Plus
Query: 1 accaaaatttcaattattattatcttccaaaaaaacaaaattatacagatgatgatggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaaaatttcaattattattatcttccaaaaaaacaaaattatacagatgatgatggtg 60
Query: 61 atatggaacttcgattggctaatattcactgtgtctctaaaaaccatccacttatcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatggaacttcgattggctaatattcactgtgtctctaaaaaccatccacttatcaaga 120
Query: 121 taagatggaccctacactcatccaatctaaaccagtatctcaagattcttatctaattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taagatggaccctacactcatccaatctaaaccagtatctcaagattcttatctaattac 180
Query: 181 atcattctctaccgttagatgaaattgaccattaaccctaccataactccatacaccgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcattctctaccgttagatgaaattgaccattaaccctaccataactccatacaccgcg 240
Query: 241 agatactggattaaccaaatcgagatcatcgtagccgtccgatcaacaagtaccatctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatactggattaaccaaatcgagatcatcgtagccgtccgatcaacaagtaccatctct 300
Query: 301 tgaaatactcgaaatcctcataagtccgtccctctttgctctcactatcaaaactctgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaaatactcgaaatcctcataagtccgtccctctttgctctcactatcaaaactctgaa 360
Query: 361 tttcgatttcaatggagtcacgcgtgctgttacgcgccaccgcgaatgtcgttggaattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttcgatttcaatggagtcacgcgtgctgttacgcgccaccgcgaatgtcgttggaattc 420
Query: 421 cgaaattgagacgaccaatcggagcgatccaccgtcaattcagcactgcatcgtcttcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgaaattgagacgaccaatcggagcgatccaccgtcaattcagcactgcatcgtcttcct 480
Query: 481 cgttctcggttaaaccaatcggaggaatcggagagggagcgaatctgatctccggtcgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgttctcggttaaaccaatcggaggaatcggagagggagcgaatctgatctccggtcgtc 540
Query: 541 agcttcgtccaattcttcttctcgattcgtcggcgatcaacggaggagagaaaagagaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agcttcgtccaattcttcttctcgattcgtcggcgatcaacggaggagagaaaagagaaa 600
Query: 601 ttctcaaaccggttaaagccgccgctgctgaaggtggagataccgctggggatgctaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttctcaaaccggttaaagccgccgctgctgaaggtggagataccgctggggatgctaaag 660
Query: 661 ttggattcctcgccaagtatccatggctagtcactggattcttcttcttcatgtggtact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttggattcctcgccaagtatccatggctagtcactggattcttcttcttcatgtggtact 720
Query: 721 tcttgaatgtgattttcaacatccttaacaagaagatctataattacttcccttatccct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcttgaatgtgattttcaacatccttaacaagaagatctataattacttcccttatccct 780
Query: 781 attttgtatcggtgatacacttgttcgtgggagttgtttactgcttgatcagctggtccg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 attttgtatcggtgatacacttgttcgtgggagttgtttactgcttgatcagctggtccg 840
Query: 841 tgggtcttcctaaacgtgccccgattgactcgaacctcctcaaggtattgataccagtcg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgggtcttcctaaacgtgccccgattgactcgaacctcctcaaggtattgataccagtcg 900
Query: 901 cagtctgtcacgccttaggccatgtcactagcaatgtctctttcgctgcggttgctgtct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cagtctgtcacgccttaggccatgtcactagcaatgtctctttcgctgcggttgctgtct 960
Query: 961 ccttcactcacaccatcaaagcacttgagccattcttcaatgcggctgcttctcaattca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ccttcactcacaccatcaaagcacttgagccattcttcaatgcggctgcttctcaattca 1020
Query: 1021 ttatgggacaatccatccccataacactatggttgtctctagctcctgttgttcttggtg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ttatgggacaatccatccccataacactatggttgtctctagctcctgttgttcttggtg 1080
Query: 1081 ttgcaatggcttcactaactgagctatcattcaactggctcggtttcatcagtgctatga 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttgcaatggcttcactaactgagctatcattcaactggctcggtttcatcagtgctatga 1140
Query: 1141 tatcaaacatttctttcacttaccgaagcatcttctccaagaaagccatgactgatatgg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 tatcaaacatttctttcacttaccgaagcatcttctccaagaaagccatgactgatatgg 1200
Query: 1201 acagtacaaatgtctacgcttacatctccatcatcgcactcttcgtctgcattcctcctg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 acagtacaaatgtctacgcttacatctccatcatcgcactcttcgtctgcattcctcctg 1260
Query: 1261 ccatcatcgttgaaggtcctaaactacttaaccatggtttcgccgacgcgattgctaaag 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ccatcatcgttgaaggtcctaaactacttaaccatggtttcgccgacgcgattgctaaag 1320
Query: 1321 ttggaatgactaaattcatctctgatctcttctgggttggaatgttttaccatctctaca 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ttggaatgactaaattcatctctgatctcttctgggttggaatgttttaccatctctaca 1380
Query: 1381 atcagctggctaccaataccttggagagggttgcaccgctgactcacgcggttggaaacg 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 atcagctggctaccaataccttggagagggttgcaccgctgactcacgcggttggaaacg 1440
Query: 1441 ttctgaaacgtgtgttcgtgatcggtttctccatcgttatcttcggaaacaagatatcga 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ttctgaaacgtgtgttcgtgatcggtttctccatcgttatcttcggaaacaagatatcga 1500
Query: 1501 cacagacaggtataggaacaggaatagccattgctggagttgcaatgtactctatcatta 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 cacagacaggtataggaacaggaatagccattgctggagttgcaatgtactctatcatta 1560
Query: 1561 aggccaagatcgaagaagagaaacggcaaggaaagaaagcatagaaagcagctgaagacg 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 aggccaagatcgaagaagagaaacggcaaggaaagaaagcatagaaagcagctgaagacg 1620
Query: 1621 gcggtcgacagttgcataaacaagttctccgatggatatatatatatctatataataaat 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gcggtcgacagttgcataaacaagttctccgatggatatatatatatctatataataaat 1680
Query: 1681 aaccaaatgcaatagtatgttgtattgtaccatcaaccattgttttcgagtttttccttt 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 aaccaaatgcaatagtatgttgtattgtaccatcaaccattgttttcgagtttttccttt 1740
Query: 1741 ctttgttttttttttgctttctgaaaagttatatataaattttttattctgcttcttctc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ctttgttttttttttgctttctgaaaagttatatataaattttttattctgcttcttctc 1800
Query: 1801 tttttaatggagaacattttcatttccatttcttctgatatgcaattatcttaacggata 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 tttttaatggagaacattttcatttccatttcttctgatatgcaattatcttaacggata 1860
Query: 1861 aaaggcataataatgtatttatttgctctttctcttggagcatatacccatcatcgtgac 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 aaaggcataataatgtatttatttgctctttctcttggagcatatacccatcatcgtgac 1920
Query: 1921 gtagagcttgaggtttaatttatttcttataacatttttctccttgctaattttgttttt 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gtagagcttgaggtttaatttatttcttataacatttttctccttgctaattttgttttt 1980
Query: 1981 caactagtaatttgttatatattatttttgtaatttatatgcgttataaaatttgttact 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 caactagtaatttgttatatattatttttgtaatttatatgcgttataaaatttgttact 2040
Query: 2041 gctcggtc 2048
||||||||
Sbjct: 2041 gctcggtc 2048
>At5g46110.2 68418.m05670 phosphate/triose-phosphate translocator, putative
identical to phosphate/triose-phosphate translocator
precursor [Arabidopsis thaliana] gi|3983125|gb|AAC83815;
similar to triose phosphate/phosphate translocator,
chloroplast precursor (CTPT)[Cauliflower]{Brassica
oleracea} SWISS-PROT:P52177
Length = 2055
Score = 4022 bits (2029), Expect = 0.0
Identities = 2048/2055 (99%), Gaps = 7/2055 (0%)
Strand = Plus / Plus
Query: 1 accaaaatttcaattattattatcttccaaaaaaacaaaattatacagatgatgatggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaaaatttcaattattattatcttccaaaaaaacaaaattatacagatgatgatggtg 60
Query: 61 atatggaacttcgattggctaatattcactgtgtctctaaaaaccatccacttatcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatggaacttcgattggctaatattcactgtgtctctaaaaaccatccacttatcaaga 120
Query: 121 taagatggaccctacactcatccaatctaaaccagtatctcaagattcttatctaattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taagatggaccctacactcatccaatctaaaccagtatctcaagattcttatctaattac 180
Query: 181 atcattctctaccgttagatgaaattgaccattaaccctaccataactccatacaccgcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcattctctaccgttagatgaaattgaccattaaccctaccataactccatacaccgcg 240
Query: 241 agatactggattaaccaaatcgagatcatcgtagccgtccgatcaacaagtaccatctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatactggattaaccaaatcgagatcatcgtagccgtccgatcaacaagtaccatctct 300
Query: 301 tgaaatactcgaaatcctcataagtccgtccctctttgctctcactatcaaaactctgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaaatactcgaaatcctcataagtccgtccctctttgctctcactatcaaaactctgaa 360
Query: 361 tttcgatttcaatggagtcacgcgtgctgttacgcgccaccgcgaatgtcgttggaattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttcgatttcaatggagtcacgcgtgctgttacgcgccaccgcgaatgtcgttggaattc 420
Query: 421 cgaaattgagacgaccaatcggagcgatccaccgtcaattcagcactgcatcgtcttcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgaaattgagacgaccaatcggagcgatccaccgtcaattcagcactgcatcgtcttcct 480
Query: 481 cgttctcggttaaaccaatcggaggaatcggagagggagcgaatctgatctccggtcgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgttctcggttaaaccaatcggaggaatcggagagggagcgaatctgatctccggtcgtc 540
Query: 541 agcttcgtccaattcttcttctcgattcgtcggcgatcaacggaggagagaaaagagaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agcttcgtccaattcttcttctcgattcgtcggcgatcaacggaggagagaaaagagaaa 600
Query: 601 ttctcaaaccggttaaagccgccgctgctgaaggtggagataccgctggg-------gat 653
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 601 ttctcaaaccggttaaagccgccgctgctgaaggtggagataccgctgggtaagagggat 660
Query: 654 gctaaagttggattcctcgccaagtatccatggctagtcactggattcttcttcttcatg 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gctaaagttggattcctcgccaagtatccatggctagtcactggattcttcttcttcatg 720
Query: 714 tggtacttcttgaatgtgattttcaacatccttaacaagaagatctataattacttccct 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tggtacttcttgaatgtgattttcaacatccttaacaagaagatctataattacttccct 780
Query: 774 tatccctattttgtatcggtgatacacttgttcgtgggagttgtttactgcttgatcagc 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tatccctattttgtatcggtgatacacttgttcgtgggagttgtttactgcttgatcagc 840
Query: 834 tggtccgtgggtcttcctaaacgtgccccgattgactcgaacctcctcaaggtattgata 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tggtccgtgggtcttcctaaacgtgccccgattgactcgaacctcctcaaggtattgata 900
Query: 894 ccagtcgcagtctgtcacgccttaggccatgtcactagcaatgtctctttcgctgcggtt 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ccagtcgcagtctgtcacgccttaggccatgtcactagcaatgtctctttcgctgcggtt 960
Query: 954 gctgtctccttcactcacaccatcaaagcacttgagccattcttcaatgcggctgcttct 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gctgtctccttcactcacaccatcaaagcacttgagccattcttcaatgcggctgcttct 1020
Query: 1014 caattcattatgggacaatccatccccataacactatggttgtctctagctcctgttgtt 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 caattcattatgggacaatccatccccataacactatggttgtctctagctcctgttgtt 1080
Query: 1074 cttggtgttgcaatggcttcactaactgagctatcattcaactggctcggtttcatcagt 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cttggtgttgcaatggcttcactaactgagctatcattcaactggctcggtttcatcagt 1140
Query: 1134 gctatgatatcaaacatttctttcacttaccgaagcatcttctccaagaaagccatgact 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gctatgatatcaaacatttctttcacttaccgaagcatcttctccaagaaagccatgact 1200
Query: 1194 gatatggacagtacaaatgtctacgcttacatctccatcatcgcactcttcgtctgcatt 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gatatggacagtacaaatgtctacgcttacatctccatcatcgcactcttcgtctgcatt 1260
Query: 1254 cctcctgccatcatcgttgaaggtcctaaactacttaaccatggtttcgccgacgcgatt 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cctcctgccatcatcgttgaaggtcctaaactacttaaccatggtttcgccgacgcgatt 1320
Query: 1314 gctaaagttggaatgactaaattcatctctgatctcttctgggttggaatgttttaccat 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 gctaaagttggaatgactaaattcatctctgatctcttctgggttggaatgttttaccat 1380
Query: 1374 ctctacaatcagctggctaccaataccttggagagggttgcaccgctgactcacgcggtt 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 ctctacaatcagctggctaccaataccttggagagggttgcaccgctgactcacgcggtt 1440
Query: 1434 ggaaacgttctgaaacgtgtgttcgtgatcggtttctccatcgttatcttcggaaacaag 1493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ggaaacgttctgaaacgtgtgttcgtgatcggtttctccatcgttatcttcggaaacaag 1500
Query: 1494 atatcgacacagacaggtataggaacaggaatagccattgctggagttgcaatgtactct 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 atatcgacacagacaggtataggaacaggaatagccattgctggagttgcaatgtactct 1560
Query: 1554 atcattaaggccaagatcgaagaagagaaacggcaaggaaagaaagcatagaaagcagct 1613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 atcattaaggccaagatcgaagaagagaaacggcaaggaaagaaagcatagaaagcagct 1620
Query: 1614 gaagacggcggtcgacagttgcataaacaagttctccgatggatatatatatatctatat 1673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 gaagacggcggtcgacagttgcataaacaagttctccgatggatatatatatatctatat 1680
Query: 1674 aataaataaccaaatgcaatagtatgttgtattgtaccatcaaccattgttttcgagttt 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 aataaataaccaaatgcaatagtatgttgtattgtaccatcaaccattgttttcgagttt 1740
Query: 1734 ttcctttctttgttttttttttgctttctgaaaagttatatataaattttttattctgct 1793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ttcctttctttgttttttttttgctttctgaaaagttatatataaattttttattctgct 1800
Query: 1794 tcttctctttttaatggagaacattttcatttccatttcttctgatatgcaattatctta 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 tcttctctttttaatggagaacattttcatttccatttcttctgatatgcaattatctta 1860
Query: 1854 acggataaaaggcataataatgtatttatttgctctttctcttggagcatatacccatca 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 acggataaaaggcataataatgtatttatttgctctttctcttggagcatatacccatca 1920
Query: 1914 tcgtgacgtagagcttgaggtttaatttatttcttataacatttttctccttgctaattt 1973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 tcgtgacgtagagcttgaggtttaatttatttcttataacatttttctccttgctaattt 1980
Query: 1974 tgtttttcaactagtaatttgttatatattatttttgtaatttatatgcgttataaaatt 2033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 tgtttttcaactagtaatttgttatatattatttttgtaatttatatgcgttataaaatt 2040
Query: 2034 tgttactgctcggtc 2048
|||||||||||||||
Sbjct: 2041 tgttactgctcggtc 2055
>At3g46590.1 68416.m05057 telomere repeat-binding protein, putative similar to
telomere repeat-binding protein TRP1 [Arabidopsis
thaliana] gi|5459298|emb|CAB50690
Length = 2274
Score = 40.1 bits (20), Expect = 0.073
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1739 ttctttgttttttttttgctttct 1762
||||||||||||||||| ||||||
Sbjct: 2130 ttctttgtttttttttttctttct 2153
>At5g57450.2 68418.m07178 DNA repair family protein contains similarity to
Swiss-Prot:O43542 DNA-repair protein XRCC3 (X-ray repair
cross-complementing protein 3) [Homo sapiens]
Length = 1215
Score = 38.2 bits (19), Expect = 0.29
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 563 cgattcgtcggcgatcaacggaggaga 589
|||||||||||||||| |||||||||
Sbjct: 110 cgattcgtcggcgatcgtcggaggaga 84
>At5g57450.1 68418.m07177 DNA repair family protein contains similarity to
Swiss-Prot:O43542 DNA-repair protein XRCC3 (X-ray repair
cross-complementing protein 3) [Homo sapiens]
Length = 1338
Score = 38.2 bits (19), Expect = 0.29
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 563 cgattcgtcggcgatcaacggaggaga 589
|||||||||||||||| |||||||||
Sbjct: 110 cgattcgtcggcgatcgtcggaggaga 84
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 94,683
Number of Sequences: 29161
Number of extensions: 94683
Number of successful extensions: 3285
Number of sequences better than 10.0: 83
length of query: 2048
length of database: 44,058,232
effective HSP length: 18
effective length of query: 2030
effective length of database: 43,533,334
effective search space: 88372668020
effective search space used: 88372668020
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)