BLASTX 1.5.4-Paracel [2003-06-05]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BT011700.F
         (117 letters)

Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr 
           1,895,298 sequences; 629,712,918 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198398.1|  expressed protein [Arabidopsis thaliana]|g...    82   3e-15
dbj|BAC92462.1|  hypothetical protein [Oryza sativa (japonic...    35   0.35 
dbj|BAD19994.1|  cytokinin inducibl protein-like [Oryza sati...    35   0.35 
gb|AAQ56453.1|  putative cytokinin inducibl protein [Oryza s...    35   0.35 
dbj|BAD02989.1|  hypothetical protein [Oryza sativa (japonic...    35   0.35 
ref|NP_921170.1|  hypothetical protein [Oryza sativa (japoni...    32   5.0  
dbj|BAD19350.1|  cytokinin inducibl protein-like protein [Or...    31   6.6  
gb|AAD27577.1|  hypothetical protein [Sorghum bicolor]             31   8.6  

>ref|NP_198398.1| expressed protein [Arabidopsis thaliana]|gi|9758150|dbj|BAB08707.1|
           unnamed protein product [Arabidopsis
           thaliana]|gi|44917477|gb|AAS49063.1| At5g35480
           [Arabidopsis thaliana]
          Length = 38

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +1

Query: 1   MKKSRGSSFNQYEDELLCCVYLEISQDPIGSNNQSGKK 114
           MKKSRGSSFNQYEDELLCCVYLEISQDPIGSNNQSGKK
Sbjct: 1   MKKSRGSSFNQYEDELLCCVYLEISQDPIGSNNQSGKK 38



>dbj|BAC92462.1| hypothetical protein [Oryza sativa (japonica
           cultivar-group)]|gi|35215120|dbj|BAC92476.1|
           hypothetical protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 274

 Score = 35.4 bits (80), Expect = 0.35
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +1

Query: 4   KKSRGSSFNQYEDELLCCVYLEISQDPIGSNNQSGK 111
           +  R S+FN+ ED  LC  +  IS DPI  N Q GK
Sbjct: 14  RAKRSSNFNRKEDIQLCISWQSISSDPIIGNEQPGK 49



>dbj|BAD19994.1| cytokinin inducibl protein-like [Oryza sativa (japonica
           cultivar-group)]|gi|47497834|dbj|BAD19931.1| cytokinin
           inducibl protein-like [Oryza sativa (japonica
           cultivar-group)]
          Length = 320

 Score = 35.4 bits (80), Expect = 0.35
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +1

Query: 4   KKSRGSSFNQYEDELLCCVYLEISQDPIGSNNQSGK 111
           +  R S+FN+ ED  LC  +  IS DPI  N Q GK
Sbjct: 29  RAKRSSNFNRKEDIQLCISWQSISSDPIIGNEQPGK 64



>gb|AAQ56453.1| putative cytokinin inducibl protein [Oryza sativa (japonica
           cultivar-group)]|gi|34015281|gb|AAQ56472.1| putative
           cytokinin inducible protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 1256

 Score = 35.4 bits (80), Expect = 0.35
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +1

Query: 4   KKSRGSSFNQYEDELLCCVYLEISQDPIGSNNQSGK 111
           +  R S+FN+ ED  LC  +  IS DPI  N Q GK
Sbjct: 14  RAKRSSNFNRKEDIQLCISWQSISSDPIIGNEQPGK 49



>dbj|BAD02989.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 303

 Score = 35.4 bits (80), Expect = 0.35
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +1

Query: 4   KKSRGSSFNQYEDELLCCVYLEISQDPIGSNNQSGK 111
           +  R S+FN+ ED  LC  +  IS DPI  N Q GK
Sbjct: 40  RAKRSSNFNRKEDIQLCISWQSISSDPIIGNEQPGK 75



>ref|NP_921170.1| hypothetical protein [Oryza sativa (japonica
           cultivar-group)]|gi|19881681|gb|AAM01082.1| Hypothetical
           protein [Oryza sativa]|gi|21671965|gb|AAM74327.1|
           Hypothetical protein [Oryza sativa (japonica
           cultivar-group)]|gi|31431724|gb|AAP53457.1| hypothetical
           protein [Oryza sativa (japonica cultivar-group)]
          Length = 330

 Score = 31.6 bits (70), Expect = 5.0
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 13  RGSSFNQYEDELLCCVYLEISQDPIGSNNQSGK 111
           R S++ + ED  LC  +  IS DPI  N Q GK
Sbjct: 40  RSSNYTRKEDIQLCISWQSISSDPIIGNEQPGK 72



>dbj|BAD19350.1| cytokinin inducibl protein-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 306

 Score = 31.2 bits (69), Expect = 6.6
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 13  RGSSFNQYEDELLCCVYLEISQDPIGSNNQSGK 111
           R S++   ED  LC  +  IS DPI  N Q GK
Sbjct: 40  RSSNYTHKEDIQLCISWQSISSDPIIGNEQPGK 72



>gb|AAD27577.1| hypothetical protein [Sorghum bicolor]
          Length = 1475

 Score = 30.8 bits (68), Expect = 8.6
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 13   RGSSFNQYEDELLCCVYLEISQDPIGSNNQ 102
            R   F+  ED+++C  +L +S+DPI   NQ
Sbjct: 1191 RQKKFDIEEDKVICSAWLNVSKDPINGANQ 1220



  Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
    Posted date:  Jul 5, 2004 10:54 PM
  Number of letters in database: 629,712,918
  Number of sequences in database:  1,895,298
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 14
effective length of database: 603,178,746
effective search space used: 14476289904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)