BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.15111.C2
(2658 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g17920.1 68418.m02101 5-methyltetrahydropteroyltriglutam... 5269 0.0
At3g03780.2 68416.m00387 5-methyltetrahydropteroyltriglutam... 2458 0.0
At3g03780.1 68416.m00386 5-methyltetrahydropteroyltriglutam... 2458 0.0
At5g20980.1 68418.m02494 5-methyltetrahydropteroyltriglutam... 301 2e-80
At1g42710.1 68414.m04932 hypothetical protein 48 4e-04
>At5g17920.1 68418.m02101 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase / vitamin-B12-independent methionine
synthase / cobalamin-independent methionine synthase
(CIMS) identical to SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana}
Length = 2682
Score = 5269 bits (2658), Expect = 0.0
Identities = 2658/2658 (100%)
Strand = Plus / Plus
Query: 1 cttcttcctcgctctctctttcgccttctcttagcctaccctttttccttcctcctctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttcttcctcgctctctctttcgccttctcttagcctaccctttttccttcctcctctcc 60
Query: 61 gattcttcctccgtcagtaaaagaaaatcaaaatggcttcacacattgttggatacccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattcttcctccgtcagtaaaagaaaatcaaaatggcttcacacattgttggatacccac 120
Query: 121 gtatgggccctaagagagagctcaagtttgcattggaatctttctgggatggtaagagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtatgggccctaagagagagctcaagtttgcattggaatctttctgggatggtaagagca 180
Query: 181 ctgctgaggatcttcagaaggtgtctgctgatctcaggtcatccatctggaaacagatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctgctgaggatcttcagaaggtgtctgctgatctcaggtcatccatctggaaacagatgt 240
Query: 241 ctgccgctgggactaagttcatccctagcaacacctttgctcactacgaccaggttcttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgccgctgggactaagttcatccctagcaacacctttgctcactacgaccaggttcttg 300
Query: 301 acaccaccgccatgctcggtgctgttccacctaggtatggatacactggtggtgagatcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acaccaccgccatgctcggtgctgttccacctaggtatggatacactggtggtgagatcg 360
Query: 361 gccttgatgtttacttctccatggctagaggaaatgcctctgtgcctgccatggaaatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gccttgatgtttacttctccatggctagaggaaatgcctctgtgcctgccatggaaatga 420
Query: 421 ccaagtggttcgacaccaactaccattacatcgtccctgagttgggccctgaggttaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccaagtggttcgacaccaactaccattacatcgtccctgagttgggccctgaggttaact 480
Query: 481 tctcttacgcatcccacaaggcggtgaatgagtacaaggaggccaaggctcttggtgttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctcttacgcatcccacaaggcggtgaatgagtacaaggaggccaaggctcttggtgttg 540
Query: 541 acaccgtccctgtacttgttggcccagtctcttacttgctgctttccaaggctgccaagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acaccgtccctgtacttgttggcccagtctcttacttgctgctttccaaggctgccaagg 600
Query: 601 gtgttgacaagtcattcgaacttctttctcttctccctaagattctcccgatctacaagg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtgttgacaagtcattcgaacttctttctcttctccctaagattctcccgatctacaagg 660
Query: 661 aagtgattaccgagcttaaggctgctggtgccacctggattcagcttgacgagcctgtcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aagtgattaccgagcttaaggctgctggtgccacctggattcagcttgacgagcctgtcc 720
Query: 721 ttgttatggatcttgagggtcagaaactccaggcctttactggtgcctatgctgaacttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttgttatggatcttgagggtcagaaactccaggcctttactggtgcctatgctgaacttg 780
Query: 781 aatcaactctttctggtttgaatgttcttgtcgagacctacttcgctgatatccctgctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aatcaactctttctggtttgaatgttcttgtcgagacctacttcgctgatatccctgctg 840
Query: 841 aggcatacaagaccctaacctcattgaagggtgtgactgcctttggatttgatttggttc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aggcatacaagaccctaacctcattgaagggtgtgactgcctttggatttgatttggttc 900
Query: 901 gtggcaccaagacccttgatttggtcaaggcaggtttccctgagggaaagtacctctttg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gtggcaccaagacccttgatttggtcaaggcaggtttccctgagggaaagtacctctttg 960
Query: 961 ctggtgttgttgatggaaggaacatctgggccaacgactttgctgcgtccctaagcacct 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ctggtgttgttgatggaaggaacatctgggccaacgactttgctgcgtccctaagcacct 1020
Query: 1021 tgcaggcacttgaaggcattgttggtaaagacaagcttgtggtctcaacctcctgctctc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tgcaggcacttgaaggcattgttggtaaagacaagcttgtggtctcaacctcctgctctc 1080
Query: 1081 ttctccacaccgctgttgatcttatcaatgagactaagcttgatgatgaaatcaagtcat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttctccacaccgctgttgatcttatcaatgagactaagcttgatgatgaaatcaagtcat 1140
Query: 1141 ggttggcgtttgctgcccagaaggtcgttgaagtgaacgctttggccaaggctttggctg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ggttggcgtttgctgcccagaaggtcgttgaagtgaacgctttggccaaggctttggctg 1200
Query: 1201 gtcagaaggacgaggctcttttctctgccaatgctgcggctttggcttcaaggagatctt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 gtcagaaggacgaggctcttttctctgccaatgctgcggctttggcttcaaggagatctt 1260
Query: 1261 ccccaagagtcaccaacgagggtgtccagaaggctgctgctgctttgaagggatctgacc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ccccaagagtcaccaacgagggtgtccagaaggctgctgctgctttgaagggatctgacc 1320
Query: 1321 accgtcgtgcaaccaatgttagtgctaggctagatgctcagcagaagaagctcaatctcc 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 accgtcgtgcaaccaatgttagtgctaggctagatgctcagcagaagaagctcaatctcc 1380
Query: 1381 caatcctaccaaccacaaccattggatccttcccacagactgtagagctcaggagagttc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 caatcctaccaaccacaaccattggatccttcccacagactgtagagctcaggagagttc 1440
Query: 1441 gtcgtgagtacaaggccaaaaaggtctcagaggaggactacgttaaagccatcaaggaag 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gtcgtgagtacaaggccaaaaaggtctcagaggaggactacgttaaagccatcaaggaag 1500
Query: 1501 agatcaagaaagttgttgacctccaagaggaacttgacatcgatgttcttgtccacggag 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 agatcaagaaagttgttgacctccaagaggaacttgacatcgatgttcttgtccacggag 1560
Query: 1561 agccagagagaaacgacatggttgagtactttggtgagcagttgtctggttttgccttca 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 agccagagagaaacgacatggttgagtactttggtgagcagttgtctggttttgccttca 1620
Query: 1621 ctgcaaacggatgggtccaatcttatggatctcgctgtgtgaagccaccagttatctatg 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 ctgcaaacggatgggtccaatcttatggatctcgctgtgtgaagccaccagttatctatg 1680
Query: 1681 gtgatgtgagccgtcccaaggcaatgaccgtcttctggtccgcaatggctcagagcatga 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gtgatgtgagccgtcccaaggcaatgaccgtcttctggtccgcaatggctcagagcatga 1740
Query: 1741 cctctcgcccaatgaagggtatgcttactggtcccgtcaccattctcaactggtcctttg 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 cctctcgcccaatgaagggtatgcttactggtcccgtcaccattctcaactggtcctttg 1800
Query: 1801 tcaggaacgaccagcccaggcacgaaacctgttaccagatcgctttggccatcaaggacg 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 tcaggaacgaccagcccaggcacgaaacctgttaccagatcgctttggccatcaaggacg 1860
Query: 1861 aagtcgaggatcttgagaaaggtggaatcggtgtcattcagattgatgaggctgcactta 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 aagtcgaggatcttgagaaaggtggaatcggtgtcattcagattgatgaggctgcactta 1920
Query: 1921 gagaaggactaccactcaggaaatccgagcatgctttctacttggactgggccgtccact 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 gagaaggactaccactcaggaaatccgagcatgctttctacttggactgggccgtccact 1980
Query: 1981 ccttcagaatcaccaactgtggagtccaagacagcacccagatccacactcacatgtgct 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 ccttcagaatcaccaactgtggagtccaagacagcacccagatccacactcacatgtgct 2040
Query: 2041 actcccacttcaatgacatcatacactccatcatcgacatggatgctgatgtcatcacca 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 actcccacttcaatgacatcatacactccatcatcgacatggatgctgatgtcatcacca 2100
Query: 2101 ttgagaactccaggtctgatgagaagcttctttccgtgttccgtgaaggagtgaagtacg 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 ttgagaactccaggtctgatgagaagcttctttccgtgttccgtgaaggagtgaagtacg 2160
Query: 2161 gtgctggaatcggtccaggagtctacgacatccactctccaagaataccatcttctgagg 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 gtgctggaatcggtccaggagtctacgacatccactctccaagaataccatcttctgagg 2220
Query: 2221 aaatcgcagacagggtcaacaagatgcttgctgtcctagagcagaacatcctttgggtta 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 aaatcgcagacagggtcaacaagatgcttgctgtcctagagcagaacatcctttgggtta 2280
Query: 2281 accctgactgtggtctcaagacccgtaagtacaccgaggtcaagcctgcactcaagaaca 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 accctgactgtggtctcaagacccgtaagtacaccgaggtcaagcctgcactcaagaaca 2340
Query: 2341 tggttgatgcggctaagctcatccgctcccagctcgccagtgccaagtgaagaaaagctt 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 tggttgatgcggctaagctcatccgctcccagctcgccagtgccaagtgaagaaaagctt 2400
Query: 2401 gatttgaacaaggaaacgtttttttttctctaaaatggttgtgttttatttggtttaata 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 gatttgaacaaggaaacgtttttttttctctaaaatggttgtgttttatttggtttaata 2460
Query: 2461 actttcttaaaaatatttttagtcgaaggtagatttgatgcatatggtttctttcttgtt 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 actttcttaaaaatatttttagtcgaaggtagatttgatgcatatggtttctttcttgtt 2520
Query: 2521 gagagagagaaaggctatagcatcctttggatttgatgcaatgtttgtgattttcttttt 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 gagagagagaaaggctatagcatcctttggatttgatgcaatgtttgtgattttcttttt 2580
Query: 2581 gtctccaatatatttctctgatggaatgtcttttttctaaagtatcttgaaaaggaataa 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 gtctccaatatatttctctgatggaatgtcttttttctaaagtatcttgaaaaggaataa 2640
Query: 2641 gaggattgattcttatac 2658
||||||||||||||||||
Sbjct: 2641 gaggattgattcttatac 2658
>At3g03780.2 68416.m00387 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase, putative / vitamin-B12-independent
methionine synthase, putative / cobalamin-independent
methionine synthase, putative very strong similarity to
SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana};
contains Pfam profile PF01717: Methionine synthase,
vitamin-B12 independent
Length = 2608
Score = 2458 bits (1240), Expect = 0.0
Identities = 2038/2304 (88%)
Strand = Plus / Plus
Query: 90 aaaatggcttcacacattgttggatacccacgtatgggccctaagagagagctcaagttt 149
||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 70 aaaatggcttcccacattgttggatatccacgtatgggacctaagagagagctcaagttt 129
Query: 150 gcattggaatctttctgggatggtaagagcactgctgaggatcttcagaaggtgtctgct 209
|||||||| |||||||||||||| ||||||| ||| || ||| | |||||||||||||||
Sbjct: 130 gcattggagtctttctgggatggcaagagcagtgccgatgatttgcagaaggtgtctgct 189
Query: 210 gatctcaggtcatccatctggaaacagatgtctgccgctgggactaagttcatccctagc 269
||||||||||| |||||||||||||||||||| ||||||| ||||| ||||| |||
Sbjct: 190 gatctcaggtctgatatctggaaacagatgtctgctgctgggattaagtatatcccaagc 249
Query: 270 aacacctttgctcactacgaccaggttcttgacaccaccgccatgctcggtgctgttcca 329
||||||||| |||| || |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 250 aacaccttttctcattatgaccaggtgcttgacaccaccgccatgcttggtgctgttcca 309
Query: 330 cctaggtatggatacactggtggtgagatcggccttgatgtttacttctccatggctaga 389
|||| ||||||| || ||||||||||||| || ||||||||||||||||||||||||
Sbjct: 310 tctagatatggatttaccagtggtgagatcggtctcgatgtttacttctccatggctaga 369
Query: 390 ggaaatgcctctgtgcctgccatggaaatgaccaagtggttcgacaccaactaccattac 449
|||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 370 ggaaatgcctctgttccagctatggagatgaccaagtggtttgacaccaactaccattac 429
Query: 450 atcgtccctgagttgggccctgaggttaacttctcttacgcatcccacaaggcggtgaat 509
|||||||| |||||||||||||| || || || ||||||||||| |||||||| || |||
Sbjct: 430 atcgtcccagagttgggccctgaagtgaaattttcttacgcatctcacaaggctgtcaat 489
Query: 510 gagtacaaggaggccaaggctcttggtgttgacaccgtccctgtacttgttggcccagtc 569
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 490 gagtacaaggaggccaaggctcttggtgttgagaccgtccctgtacttgttggccctgtc 549
Query: 570 tcttacttgctgctttccaaggctgccaagggtgttgacaagtcattcgaacttctttct 629
||||||||||| ||||||||| ||| |||||||||||||||||||| || ||||| ||
Sbjct: 550 tcttacttgcttctttccaagcttgctaagggtgttgacaagtcatttgatcttctctcc 609
Query: 630 cttctccctaagattctcccgatctacaaggaagtgattaccgagcttaaggctgctggt 689
|||||||| || || ||||| | ||||||||||| ||| | ||||||||||| ||||||
Sbjct: 610 cttctccccaaaatcctcccagtttacaaggaagtcattgcagagcttaaggcagctggt 669
Query: 690 gccacctggattcagcttgacgagcctgtccttgttatggatcttgagggtcagaaactc 749
||| |||||||||||||||| |||||| || |||| |||||||| |||||||| ||||||
Sbjct: 670 gcctcctggattcagcttgatgagcctctctttgtcatggatctcgagggtcacaaactc 729
Query: 750 caggcctttactggtgcctatgctgaacttgaatcaactctttctggtttgaatgttctt 809
||||| |||| |||||||||||||| |||||||||||||| |||||| |||||||||||
Sbjct: 730 caggcttttagcggtgcctatgctgagcttgaatcaactctctctggtctgaatgttctt 789
Query: 810 gtcgagacctacttcgctgatatccctgctgaggcatacaagaccctaacctcattgaag 869
|| ||||||||||||||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 790 gtggagacctacttcgctgatatccctgctgaagcatacaagacccttacttccttgaag 849
Query: 870 ggtgtgactgcctttggatttgatttggttcgtggcaccaagacccttgatttggtcaag 929
|||||||||||||| |||||||||||||||||||||||||||||| |||| ||| |||||
Sbjct: 850 ggtgtgactgccttcggatttgatttggttcgtggcaccaagaccattgacttgatcaag 909
Query: 930 gcaggtttccctgagggaaagtacctctttgctggtgttgttgatggaaggaacatctgg 989
|||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 910 tcaggtttcccacagggcaagtacctctttgctggtgttgttgacggaaggaacatctgg 969
Query: 990 gccaacgactttgctgcgtccctaagcaccttgcaggcacttgaaggcattgttggtaaa 1049
||||| ||| | ||||| || || | |||||||||| ||||||| || |||||||||||
Sbjct: 970 gccaatgacctcgctgcctctctcatcaccttgcagtcacttgagggtgttgttggtaaa 1029
Query: 1050 gacaagcttgtggtctcaacctcctgctctcttctccacaccgctgttgatcttatcaat 1109
||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| ||
Sbjct: 1030 gacaagcttgtggtctcaacctcttgctctcttctccacactgccgttgaccttattaac 1089
Query: 1110 gagactaagcttgatgatgaaatcaagtcatggttggcgtttgctgcccagaaggtcgtt 1169
|||||||||||||||| |||||||||||| ||| | || ||||||||||||||||| |||
Sbjct: 1090 gagactaagcttgatgctgaaatcaagtcgtggctagcttttgctgcccagaaggttgtt 1149
Query: 1170 gaagtgaacgctttggccaaggctttggctggtcagaaggacgaggctcttttctctgcc 1229
||||| |||| ||||||||||||||||| ||||||| | ||| | | ||| |||||
Sbjct: 1150 gaagttgacgcattggccaaggctttggccggtcagacaaatgagagtttcttcactgcc 1209
Query: 1230 aatgctgcggctttggcttcaaggagatcttccccaagagtcaccaacgagggtgtccag 1289
|| |||| || ||| |||| ||||| |||||||||||||||||||| ||| |||||||
Sbjct: 1210 aacgctgacgcattgtcttcgaggaggtcttccccaagagtcaccaatgagtctgtccag 1269
Query: 1290 aaggctgctgctgctttgaagggatctgaccaccgtcgtgcaaccaatgttagtgctagg 1349
||||||||||||||||||||||||||||||||||| ||| |||| | ||||| || |||
Sbjct: 1270 aaggctgctgctgctttgaagggatctgaccaccgccgtacaactgaagttagcgcaagg 1329
Query: 1350 ctagatgctcagcagaagaagctcaatctcccaatcctaccaaccacaaccattggatcc 1409
||||||||||||||||||||||| || || |||||||| |||||||||||||||||||||
Sbjct: 1330 ctagatgctcagcagaagaagcttaaccttccaatcctcccaaccacaaccattggatcc 1389
Query: 1410 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1469
||||||||||| || || |||||||||||||| ||||| ||||||||||| || ||||
Sbjct: 1390 ttcccacagaccgtggaactcaggagagttcgccgtgaatacaaggccaagaaaatctct 1449
Query: 1470 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1529
|| ||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1450 gaagaggattacgtcaaggccatcaaggaagagatcaagaaagttgttgacatccaagag 1509
Query: 1530 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1589
|| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 1510 gaccttgacattgatgttcttgttcacggagagcctgagagaaacgacatggttgagtac 1569
Query: 1590 tttggtgagcagttgtctggttttgccttcactgcaaacggatgggtccaatcttatgga 1649
||||| ||||| ||||| ||||| || ||||| |||||||||||||| ||||| ||||||
Sbjct: 1570 tttggagagcaattgtcaggtttcgcattcacagcaaacggatgggtgcaatcctatgga 1629
Query: 1650 tctcgctgtgtgaagccaccagttatctatggtgatgtgagccgtcccaaggcaatgacc 1709
||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||
Sbjct: 1630 tctcgctgtgtgaagccaccagttatctatggtgacgtgagccgccccaagccaatgaca 1689
Query: 1710 gtcttctggtccgcaatggctcagagcatgacctctcgcccaatgaagggtatgcttact 1769
|||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||
Sbjct: 1690 gtcttctggtcctcaacagctcagagcatgaccaaacgtccaatgaagggtatgcttaca 1749
Query: 1770 ggtcccgtcaccattctcaactggtcctttgtcaggaacgaccagcccaggcacgaaacc 1829
||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1750 ggtccagtcacaattctcaactggtcttttgtcagaaacgaccagcccaggcacgaaacc 1809
Query: 1830 tgttaccagatcgctttggccatcaaggacgaagtcgaggatcttgagaaaggtggaatc 1889
|||||||||||||||||||||||||| || ||||| || || || |||||||| || ||
Sbjct: 1810 tgttaccagatcgctttggccatcaaagatgaagtggaagacctcgagaaaggcggtatt 1869
Query: 1890 ggtgtcattcagattgatgaggctgcacttagagaaggactaccactcaggaaatccgag 1949
|| ||||||||||| ||||| || ||||||||||||||| | || || |||||| ||||
Sbjct: 1870 ggagtcattcagatcgatgaagccgcacttagagaaggattgcctcttaggaaagccgaa 1929
Query: 1950 catgctttctacttggactgggccgtccactccttcagaatcaccaactgtggagtccaa 2009
|| ||||||||||||||||||| || ||||| |||||||||||||||||||| ||||||
Sbjct: 1930 cactctttctacttggactgggctgttcactctttcagaatcaccaactgtggcgtccaa 1989
Query: 2010 gacagcacccagatccacactcacatgtgctactcccacttcaatgacatcatacactcc 2069
|||||||| ||||| |||||||||||||| ||||| ||||||| |||||||| |||||
Sbjct: 1990 gacagcactcagattcacactcacatgtgttactcaaacttcaacgacatcatccactca 2049
Query: 2070 atcatcgacatggatgctgatgtcatcaccattgagaactccaggtctgatgagaagctt 2129
||||| |||||||| |||||||||||||||||||||||||| | || || |||||||||
Sbjct: 2050 atcattgacatggacgctgatgtcatcaccattgagaactctcgttcagacgagaagctt 2109
Query: 2130 ctttccgtgttccgtgaaggagtgaagtacggtgctggaatcggtccaggagtctacgac 2189
|| || ||||||||||||||||||||||||||||| ||||||||||| || || ||||||
Sbjct: 2110 ctctcagtgttccgtgaaggagtgaagtacggtgcaggaatcggtcctggtgtttacgac 2169
Query: 2190 atccactctccaagaataccatcttctgaggaaatcgcagacagggtcaacaagatgctt 2249
|| |||||||| ||||||||||| | || ||||| ||||||||| ||||||||||||||
Sbjct: 2170 attcactctccgagaataccatccacagatgaaattgcagacaggatcaacaagatgctt 2229
Query: 2250 gctgtcctagagcagaacatcctttgggttaaccctgactgtggtctcaagacccgtaag 2309
|| || || |||||||||||| | ||||||||||||||||||||||| ||||| | |||
Sbjct: 2230 gcggttcttgagcagaacatcttgtgggttaaccctgactgtggtctgaagacaaggaag 2289
Query: 2310 tacaccgaggtcaagcctgcactcaagaacatggttgatgcggctaagctcatccgctcc 2369
||||| ||||| || || ||||| || ||||||||| ||||||||||| |||||||||
Sbjct: 2290 tacactgaggttaaaccagcacttaaagccatggttgacgcggctaagcttatccgctcc 2349
Query: 2370 cagctcgccagtgccaagtgaaga 2393
||||||| |||||||||||||||
Sbjct: 2350 cagctcggtagtgccaagtgaaga 2373
>At3g03780.1 68416.m00386 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase, putative / vitamin-B12-independent
methionine synthase, putative / cobalamin-independent
methionine synthase, putative very strong similarity to
SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana};
contains Pfam profile PF01717: Methionine synthase,
vitamin-B12 independent
Length = 2615
Score = 2458 bits (1240), Expect = 0.0
Identities = 2038/2304 (88%)
Strand = Plus / Plus
Query: 90 aaaatggcttcacacattgttggatacccacgtatgggccctaagagagagctcaagttt 149
||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 77 aaaatggcttcccacattgttggatatccacgtatgggacctaagagagagctcaagttt 136
Query: 150 gcattggaatctttctgggatggtaagagcactgctgaggatcttcagaaggtgtctgct 209
|||||||| |||||||||||||| ||||||| ||| || ||| | |||||||||||||||
Sbjct: 137 gcattggagtctttctgggatggcaagagcagtgccgatgatttgcagaaggtgtctgct 196
Query: 210 gatctcaggtcatccatctggaaacagatgtctgccgctgggactaagttcatccctagc 269
||||||||||| |||||||||||||||||||| ||||||| ||||| ||||| |||
Sbjct: 197 gatctcaggtctgatatctggaaacagatgtctgctgctgggattaagtatatcccaagc 256
Query: 270 aacacctttgctcactacgaccaggttcttgacaccaccgccatgctcggtgctgttcca 329
||||||||| |||| || |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 257 aacaccttttctcattatgaccaggtgcttgacaccaccgccatgcttggtgctgttcca 316
Query: 330 cctaggtatggatacactggtggtgagatcggccttgatgtttacttctccatggctaga 389
|||| ||||||| || ||||||||||||| || ||||||||||||||||||||||||
Sbjct: 317 tctagatatggatttaccagtggtgagatcggtctcgatgtttacttctccatggctaga 376
Query: 390 ggaaatgcctctgtgcctgccatggaaatgaccaagtggttcgacaccaactaccattac 449
|||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||||
Sbjct: 377 ggaaatgcctctgttccagctatggagatgaccaagtggtttgacaccaactaccattac 436
Query: 450 atcgtccctgagttgggccctgaggttaacttctcttacgcatcccacaaggcggtgaat 509
|||||||| |||||||||||||| || || || ||||||||||| |||||||| || |||
Sbjct: 437 atcgtcccagagttgggccctgaagtgaaattttcttacgcatctcacaaggctgtcaat 496
Query: 510 gagtacaaggaggccaaggctcttggtgttgacaccgtccctgtacttgttggcccagtc 569
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 497 gagtacaaggaggccaaggctcttggtgttgagaccgtccctgtacttgttggccctgtc 556
Query: 570 tcttacttgctgctttccaaggctgccaagggtgttgacaagtcattcgaacttctttct 629
||||||||||| ||||||||| ||| |||||||||||||||||||| || ||||| ||
Sbjct: 557 tcttacttgcttctttccaagcttgctaagggtgttgacaagtcatttgatcttctctcc 616
Query: 630 cttctccctaagattctcccgatctacaaggaagtgattaccgagcttaaggctgctggt 689
|||||||| || || ||||| | ||||||||||| ||| | ||||||||||| ||||||
Sbjct: 617 cttctccccaaaatcctcccagtttacaaggaagtcattgcagagcttaaggcagctggt 676
Query: 690 gccacctggattcagcttgacgagcctgtccttgttatggatcttgagggtcagaaactc 749
||| |||||||||||||||| |||||| || |||| |||||||| |||||||| ||||||
Sbjct: 677 gcctcctggattcagcttgatgagcctctctttgtcatggatctcgagggtcacaaactc 736
Query: 750 caggcctttactggtgcctatgctgaacttgaatcaactctttctggtttgaatgttctt 809
||||| |||| |||||||||||||| |||||||||||||| |||||| |||||||||||
Sbjct: 737 caggcttttagcggtgcctatgctgagcttgaatcaactctctctggtctgaatgttctt 796
Query: 810 gtcgagacctacttcgctgatatccctgctgaggcatacaagaccctaacctcattgaag 869
|| ||||||||||||||||||||||||||||| |||||||||||||| || || ||||||
Sbjct: 797 gtggagacctacttcgctgatatccctgctgaagcatacaagacccttacttccttgaag 856
Query: 870 ggtgtgactgcctttggatttgatttggttcgtggcaccaagacccttgatttggtcaag 929
|||||||||||||| |||||||||||||||||||||||||||||| |||| ||| |||||
Sbjct: 857 ggtgtgactgccttcggatttgatttggttcgtggcaccaagaccattgacttgatcaag 916
Query: 930 gcaggtttccctgagggaaagtacctctttgctggtgttgttgatggaaggaacatctgg 989
|||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 917 tcaggtttcccacagggcaagtacctctttgctggtgttgttgacggaaggaacatctgg 976
Query: 990 gccaacgactttgctgcgtccctaagcaccttgcaggcacttgaaggcattgttggtaaa 1049
||||| ||| | ||||| || || | |||||||||| ||||||| || |||||||||||
Sbjct: 977 gccaatgacctcgctgcctctctcatcaccttgcagtcacttgagggtgttgttggtaaa 1036
Query: 1050 gacaagcttgtggtctcaacctcctgctctcttctccacaccgctgttgatcttatcaat 1109
||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| ||
Sbjct: 1037 gacaagcttgtggtctcaacctcttgctctcttctccacactgccgttgaccttattaac 1096
Query: 1110 gagactaagcttgatgatgaaatcaagtcatggttggcgtttgctgcccagaaggtcgtt 1169
|||||||||||||||| |||||||||||| ||| | || ||||||||||||||||| |||
Sbjct: 1097 gagactaagcttgatgctgaaatcaagtcgtggctagcttttgctgcccagaaggttgtt 1156
Query: 1170 gaagtgaacgctttggccaaggctttggctggtcagaaggacgaggctcttttctctgcc 1229
||||| |||| ||||||||||||||||| ||||||| | ||| | | ||| |||||
Sbjct: 1157 gaagttgacgcattggccaaggctttggccggtcagacaaatgagagtttcttcactgcc 1216
Query: 1230 aatgctgcggctttggcttcaaggagatcttccccaagagtcaccaacgagggtgtccag 1289
|| |||| || ||| |||| ||||| |||||||||||||||||||| ||| |||||||
Sbjct: 1217 aacgctgacgcattgtcttcgaggaggtcttccccaagagtcaccaatgagtctgtccag 1276
Query: 1290 aaggctgctgctgctttgaagggatctgaccaccgtcgtgcaaccaatgttagtgctagg 1349
||||||||||||||||||||||||||||||||||| ||| |||| | ||||| || |||
Sbjct: 1277 aaggctgctgctgctttgaagggatctgaccaccgccgtacaactgaagttagcgcaagg 1336
Query: 1350 ctagatgctcagcagaagaagctcaatctcccaatcctaccaaccacaaccattggatcc 1409
||||||||||||||||||||||| || || |||||||| |||||||||||||||||||||
Sbjct: 1337 ctagatgctcagcagaagaagcttaaccttccaatcctcccaaccacaaccattggatcc 1396
Query: 1410 ttcccacagactgtagagctcaggagagttcgtcgtgagtacaaggccaaaaaggtctca 1469
||||||||||| || || |||||||||||||| ||||| ||||||||||| || ||||
Sbjct: 1397 ttcccacagaccgtggaactcaggagagttcgccgtgaatacaaggccaagaaaatctct 1456
Query: 1470 gaggaggactacgttaaagccatcaaggaagagatcaagaaagttgttgacctccaagag 1529
|| ||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1457 gaagaggattacgtcaaggccatcaaggaagagatcaagaaagttgttgacatccaagag 1516
Query: 1530 gaacttgacatcgatgttcttgtccacggagagccagagagaaacgacatggttgagtac 1589
|| |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 1517 gaccttgacattgatgttcttgttcacggagagcctgagagaaacgacatggttgagtac 1576
Query: 1590 tttggtgagcagttgtctggttttgccttcactgcaaacggatgggtccaatcttatgga 1649
||||| ||||| ||||| ||||| || ||||| |||||||||||||| ||||| ||||||
Sbjct: 1577 tttggagagcaattgtcaggtttcgcattcacagcaaacggatgggtgcaatcctatgga 1636
Query: 1650 tctcgctgtgtgaagccaccagttatctatggtgatgtgagccgtcccaaggcaatgacc 1709
||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||
Sbjct: 1637 tctcgctgtgtgaagccaccagttatctatggtgacgtgagccgccccaagccaatgaca 1696
Query: 1710 gtcttctggtccgcaatggctcagagcatgacctctcgcccaatgaagggtatgcttact 1769
|||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||
Sbjct: 1697 gtcttctggtcctcaacagctcagagcatgaccaaacgtccaatgaagggtatgcttaca 1756
Query: 1770 ggtcccgtcaccattctcaactggtcctttgtcaggaacgaccagcccaggcacgaaacc 1829
||||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1757 ggtccagtcacaattctcaactggtcttttgtcagaaacgaccagcccaggcacgaaacc 1816
Query: 1830 tgttaccagatcgctttggccatcaaggacgaagtcgaggatcttgagaaaggtggaatc 1889
|||||||||||||||||||||||||| || ||||| || || || |||||||| || ||
Sbjct: 1817 tgttaccagatcgctttggccatcaaagatgaagtggaagacctcgagaaaggcggtatt 1876
Query: 1890 ggtgtcattcagattgatgaggctgcacttagagaaggactaccactcaggaaatccgag 1949
|| ||||||||||| ||||| || ||||||||||||||| | || || |||||| ||||
Sbjct: 1877 ggagtcattcagatcgatgaagccgcacttagagaaggattgcctcttaggaaagccgaa 1936
Query: 1950 catgctttctacttggactgggccgtccactccttcagaatcaccaactgtggagtccaa 2009
|| ||||||||||||||||||| || ||||| |||||||||||||||||||| ||||||
Sbjct: 1937 cactctttctacttggactgggctgttcactctttcagaatcaccaactgtggcgtccaa 1996
Query: 2010 gacagcacccagatccacactcacatgtgctactcccacttcaatgacatcatacactcc 2069
|||||||| ||||| |||||||||||||| ||||| ||||||| |||||||| |||||
Sbjct: 1997 gacagcactcagattcacactcacatgtgttactcaaacttcaacgacatcatccactca 2056
Query: 2070 atcatcgacatggatgctgatgtcatcaccattgagaactccaggtctgatgagaagctt 2129
||||| |||||||| |||||||||||||||||||||||||| | || || |||||||||
Sbjct: 2057 atcattgacatggacgctgatgtcatcaccattgagaactctcgttcagacgagaagctt 2116
Query: 2130 ctttccgtgttccgtgaaggagtgaagtacggtgctggaatcggtccaggagtctacgac 2189
|| || ||||||||||||||||||||||||||||| ||||||||||| || || ||||||
Sbjct: 2117 ctctcagtgttccgtgaaggagtgaagtacggtgcaggaatcggtcctggtgtttacgac 2176
Query: 2190 atccactctccaagaataccatcttctgaggaaatcgcagacagggtcaacaagatgctt 2249
|| |||||||| ||||||||||| | || ||||| ||||||||| ||||||||||||||
Sbjct: 2177 attcactctccgagaataccatccacagatgaaattgcagacaggatcaacaagatgctt 2236
Query: 2250 gctgtcctagagcagaacatcctttgggttaaccctgactgtggtctcaagacccgtaag 2309
|| || || |||||||||||| | ||||||||||||||||||||||| ||||| | |||
Sbjct: 2237 gcggttcttgagcagaacatcttgtgggttaaccctgactgtggtctgaagacaaggaag 2296
Query: 2310 tacaccgaggtcaagcctgcactcaagaacatggttgatgcggctaagctcatccgctcc 2369
||||| ||||| || || ||||| || ||||||||| ||||||||||| |||||||||
Sbjct: 2297 tacactgaggttaaaccagcacttaaagccatggttgacgcggctaagcttatccgctcc 2356
Query: 2370 cagctcgccagtgccaagtgaaga 2393
||||||| |||||||||||||||
Sbjct: 2357 cagctcggtagtgccaagtgaaga 2380
>At5g20980.1 68418.m02494 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase, putative / vitamin-B12-independent
methionine synthase, putative / cobalamin-independent
methionine synthase, putative strong similarity to
SP|O50008
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase (EC 2.1.1.14) (Vitamin-B12-independent
methionine synthase isozyme) (Cobalamin-independent
methionine synthase isozyme) {Arabidopsis thaliana};
contains Pfam profile PF01717: Methionine synthase,
vitamin-B12 independent
Length = 2728
Score = 301 bits (152), Expect = 2e-80
Identities = 595/740 (80%), Gaps = 2/740 (0%)
Strand = Plus / Plus
Query: 1564 cagagagaaacgacatggttgagtactttggtgagcagttgtctggttttgccttcactg 1623
||||||||||||| ||||| |||| || ||||||||| ||||||| ||||| ||||||
Sbjct: 1622 cagagagaaacgatatggtggagtttttcggtgagcagctgtctggctttgctttcactt 1681
Query: 1624 caaacggatgggtccaatcttatggatctcgctgtgtgaagccaccagttatctatggtg 1683
| || || |||||||| || ||||| || |||||||| |||||||| | ||||||||||
Sbjct: 1682 cgaatgggtgggtccagtcatatgggtcccgctgtgtcaagccacctatcatctatggtg 1741
Query: 1684 atgtgagccgtcccaaggcaatgaccgtcttctggtccgcaatggctcagagcatgacct 1743
|| | | ||| || ||||||||||| || |||||||| ||||||| |||| ||||||
Sbjct: 1742 atatcacccggccaaaggcaatgacggttttctggtcgtcaatggcacagaaaatgaccc 1801
Query: 1744 ctcgcccaatgaagggtatgcttactggtcccgtcaccattctcaactggtcctttgtca 1803
|| || |||||||| ||||| || || || || || |||||||| ||||||||||| |
Sbjct: 1802 aacgtcctatgaaggggatgctcacaggccctgttacaattctcaattggtcctttgtta 1861
Query: 1804 ggaacgaccagcccaggcacgaaacctgttaccagatcgctttggccatcaaggacgaag 1863
| || ||||| |||||||| || || |||| ||| || || | |||||||| || || |
Sbjct: 1862 gaaatgaccaacccaggcatgagacatgtttccaaattgcacttgccatcaaagatgagg 1921
Query: 1864 tcgaggatcttgagaaaggtggaatcggtgtcattcagattgatgaggctgcacttagag 1923
| ||||| ||||| || | ||| || ||| || ||||||||||| |||||| | ||||
Sbjct: 1922 ttgaggaccttgaaaaggctggtgtcactgttatccagattgatgaagctgcattaagag 1981
Query: 1924 aaggactaccactcaggaaatccgagcatgctttctacttggactgggccgtccactcct 1983
| ||| | || ||||| ||||||||||| || ||| | ||||||||||||||| | |
Sbjct: 1982 agggattgcctctcagaaaatccgagcaaaagttttaccttgactgggccgtccacgcat 2041
Query: 1984 tcagaatcaccaactgtggagtccaagacagcacccagatccacactcacatgtgctact 2043
||||||| || ||| | || || |||||||| || ||||||||||| |||||||||||||
Sbjct: 2042 tcagaattacaaacagcggtgtgcaagacagtactcagatccacacccacatgtgctact 2101
Query: 2044 cccacttcaatgacatcatacactccatcatcgacatggatgctgatgtcatcaccattg 2103
| | ||||| |||||||| ||||| || || || |||||||||||||| ||||| ||||
Sbjct: 2102 caaatttcaacgacatcatccactcaattattgatatggatgctgatgtgatcactattg 2161
Query: 2104 agaactccaggtctgatgagaagcttctttccgtgttccgtgaaggagtgaagtacggtg 2163
||||||| |||| ||||||||||| | || || |||| |||||||||||| |||||||
Sbjct: 2162 agaactcacggtcagatgagaagctcttatcagtcttccatgaaggagtgaaatacggtg 2221
Query: 2164 ctggaatcggtccaggagtctacgacatccactctccaagaataccatcttctgaggaaa 2223
||||||| |||||||| || || ||||| |||||||| | || |||||| |||| ||||
Sbjct: 2222 ctggaattggtccaggggtttatgacattcactctcctcgtatcccatctactgaagaaa 2281
Query: 2224 tcgcagacagggtcaacaagatgcttgctgtcctagagcag-aacatcctttgggttaac 2282
| || || | ||||||||||||||||||| || || ||| || |||||||||| |||
Sbjct: 2282 tagctgaacgtatcaacaagatgcttgctgttctgga-cagcaaagtcctttgggtgaac 2340
Query: 2283 cctgactgtggtctcaagac 2302
||||||||||| || |||||
Sbjct: 2341 cctgactgtggcctaaagac 2360
Score = 131 bits (66), Expect = 3e-29
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 349 gtggtgagatcggccttgatgtttacttctccatggctagaggaaatgcctctgtgcctg 408
|||||||||| || |||||||||||||||||||||| | |||||||| |||| | ||
Sbjct: 407 gtggtgagattgggtttgatgtttacttctccatggcacggggaaatgcttctgctcatg 466
Query: 409 ccatggaaatgaccaagtggttcgacaccaactaccattacatcgtccctgagttgggcc 468
| |||||||||||||||||||| || ||||||||||||||||| || ||||||||||| |
Sbjct: 467 ctatggaaatgaccaagtggtttgataccaactaccattacattgttcctgagttgggtc 526
Query: 469 ctgaggttaacttctcttacgcatcccacaaggc 502
|||| || || ||||| || ||||| ||||||||
Sbjct: 527 ctgacgtcaatttctcctatgcatctcacaaggc 560
Score = 61.9 bits (31), Expect = 3e-08
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 102 cacattgttggatacccacgtatgggccctaagagagagctcaagtttgcattggaatct 161
||||| ||||| || || ||||| || || ||||||||||| |||||||||||||| ||
Sbjct: 160 cacatcgttgggtatcctcgtattggaccgaagagagagcttaagtttgcattggagtcc 219
Query: 162 ttctgggatgg 172
|||||||||||
Sbjct: 220 ttctgggatgg 230
Score = 56.0 bits (28), Expect = 2e-06
Identities = 112/140 (80%)
Strand = Plus / Plus
Query: 957 tttgctggtgttgttgatggaaggaacatctgggccaacgactttgctgcgtccctaagc 1016
|||||||| |||||||||||||||||||| ||||| || || || ||||||| || |
Sbjct: 1015 tttgctggagttgttgatggaaggaacatttgggcgaatgatctttctgcgtcactcaag 1074
Query: 1017 accttgcaggcacttgaaggcattgttggtaaagacaagcttgtggtctcaacctcctgc 1076
|| | ||| | ||||||| ||||||||| ||||| || ||||||| || || || |||
Sbjct: 1075 acactacagactcttgaagacattgttggaaaagaaaaagttgtggtttctacttcttgc 1134
Query: 1077 tctcttctccacaccgctgt 1096
||||| ||||| || |||||
Sbjct: 1135 tctctactccatactgctgt 1154
Score = 34.2 bits (17), Expect = 5.8
Identities = 35/41 (85%)
Strand = Plus / Plus
Query: 696 tggattcagcttgacgagcctgtccttgttatggatcttga 736
||||||||| | || |||||| | ||||| |||||||||||
Sbjct: 754 tggattcagttcgatgagcctatacttgtgatggatcttga 794
>At1g42710.1 68414.m04932 hypothetical protein
Length = 621
Score = 48.1 bits (24), Expect = 4e-04
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 593 tgccaagggtgttgacaagtcattcgaacttctttctcttctcc 636
|||||||||||||| ||||| || || ||||||||||||||||
Sbjct: 552 tgccaagggtgttgcgaagtcttttgatcttctttctcttctcc 595
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 90,196
Number of Sequences: 29161
Number of extensions: 90196
Number of successful extensions: 2203
Number of sequences better than 10.0: 70
length of query: 2658
length of database: 44,058,232
effective HSP length: 19
effective length of query: 2639
effective length of database: 43,504,173
effective search space: 114807512547
effective search space used: 114807512547
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)