BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.13285.C2
(3479 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g33010.1 68417.m04695 glycine dehydrogenase [decarboxyla... 6895 0.0
At2g26080.1 68415.m03131 glycine dehydrogenase [decarboxyla... 2565 0.0
At3g46020.1 68416.m04979 RNA-binding protein, putative simi... 40 0.12
At1g59850.1 68414.m06741 expressed protein 40 0.12
At5g37475.1 68418.m04510 translation initiation factor-rela... 38 0.49
>At4g33010.1 68417.m04695 glycine dehydrogenase [decarboxylating], putative /
glycine decarboxylase, putative / glycine cleavage system
P-protein, putative strong similarity to SP|P49361
Glycine dehydrogenase [decarboxylating] A, mitochondrial
precursor (EC 1.4.4.2) {Flaveria pringlei}; contains Pfam
profile PF02347: Glycine cleavage system P-protein
Length = 3478
Score = 6895 bits (3478), Expect = 0.0
Identities = 3478/3478 (100%)
Strand = Plus / Plus
Query: 2 atacacattttatattcaacggtccgtgagtgtatattgtatatactctctctcagattc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atacacattttatattcaacggtccgtgagtgtatattgtatatactctctctcagattc 60
Query: 62 cctccttgtagctagcttctacctcctcctttcattcatggcgaaaaactaaaaaagaca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctccttgtagctagcttctacctcctcctttcattcatggcgaaaaactaaaaaagaca 120
Query: 122 tccatctttctcaaaacatctctcttactctcttcgttttctgactgcaaccttttttcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccatctttctcaaaacatctctcttactctcttcgttttctgactgcaaccttttttcc 180
Query: 182 caatggagcgcgcaaggagacttgcttacagaggaatcgtcaaacgtctcgttaacgaca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caatggagcgcgcaaggagacttgcttacagaggaatcgtcaaacgtctcgttaacgaca 240
Query: 242 caaaacgacaccgtaacgctgaaacacctcaccttgttcctcacgctccggcgaggtatg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaaacgacaccgtaacgctgaaacacctcaccttgttcctcacgctccggcgaggtatg 300
Query: 302 tctcttccctttcccctttcatctccacccctcgatctgtcaaccacacggcggctttcg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctcttccctttcccctttcatctccacccctcgatctgtcaaccacacggcggctttcg 360
Query: 362 ggaggcaccagcagacgcgttccatctccgtcgatgctgttaaacccagcgatactttcc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaggcaccagcagacgcgttccatctccgtcgatgctgttaaacccagcgatactttcc 420
Query: 422 ctcgtcgtcacaactctgcaacaccagacgaacaaacccacatggctaaattctgtggct 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctcgtcgtcacaactctgcaacaccagacgaacaaacccacatggctaaattctgtggct 480
Query: 482 ttgaccatatcgattcactcatcgatgctacggtgcccaaatcgattcgattagattcca 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgaccatatcgattcactcatcgatgctacggtgcccaaatcgattcgattagattcca 540
Query: 542 tgaagttctccaaattcgacgctggtttaaccgagagccaaatgattcaacacatggttg 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgaagttctccaaattcgacgctggtttaaccgagagccaaatgattcaacacatggttg 600
Query: 602 atttagcttccaagaacaaggttttcaaatccttcatcgggatgggttactacaacactc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atttagcttccaagaacaaggttttcaaatccttcatcgggatgggttactacaacactc 660
Query: 662 atgtccctactgtcattctccgtaacatcatggagaatccagcttggtacactcaataca 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgtccctactgtcattctccgtaacatcatggagaatccagcttggtacactcaataca 720
Query: 722 ctccttatcaagctgagatctctcaaggtcgtctcgaatcgctcctcaatttccagaccg 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctccttatcaagctgagatctctcaaggtcgtctcgaatcgctcctcaatttccagaccg 780
Query: 782 tgatcacagatctcacgggtcttcctatgtccaatgcgtcgcttctggatgaaggcactg 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgatcacagatctcacgggtcttcctatgtccaatgcgtcgcttctggatgaaggcactg 840
Query: 842 ctgctgcggaggcaatggccatgtgtaacaacattcttaagggtaaaaagaagacctttg 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctgctgcggaggcaatggccatgtgtaacaacattcttaagggtaaaaagaagacctttg 900
Query: 902 tcattgctagtaactgtcaccctcagactattgatgtttgtaagactagagctgatgggt 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tcattgctagtaactgtcaccctcagactattgatgtttgtaagactagagctgatgggt 960
Query: 962 ttgatttgaaagttgtcacctctgatcttaaggatatagattacagctctggtgatgttt 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ttgatttgaaagttgtcacctctgatcttaaggatatagattacagctctggtgatgttt 1020
Query: 1022 gtggggttcttgttcagtatcctggtactgaaggtgaagtcttggattatgctgagtttg 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gtggggttcttgttcagtatcctggtactgaaggtgaagtcttggattatgctgagtttg 1080
Query: 1082 ttaagaatgctcatgctaatggtgttaaggttgtgatggctacggatttgctggctttga 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttaagaatgctcatgctaatggtgttaaggttgtgatggctacggatttgctggctttga 1140
Query: 1142 ctgtgttgaaacctcctggagaatttggggcggatattgttgttggctctgctcaaaggt 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ctgtgttgaaacctcctggagaatttggggcggatattgttgttggctctgctcaaaggt 1200
Query: 1202 ttggtgttccgatgggttatggtggtcctcatgctgcgttcttggctacttcacaagagt 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ttggtgttccgatgggttatggtggtcctcatgctgcgttcttggctacttcacaagagt 1260
Query: 1262 ataagagaatgatgcctgggaggattattggtattagtgttgattcttcaggaaagcaag 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ataagagaatgatgcctgggaggattattggtattagtgttgattcttcaggaaagcaag 1320
Query: 1322 ctctgcgtatggctatgcagactagagaacagcatattaggagggacaaagccactagca 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ctctgcgtatggctatgcagactagagaacagcatattaggagggacaaagccactagca 1380
Query: 1382 acatctgtactgctcaagcgttgcttgccaacatggctgccatgtatgctgtttaccatg 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 acatctgtactgctcaagcgttgcttgccaacatggctgccatgtatgctgtttaccatg 1440
Query: 1442 gacctgcaggtctaaaatctattgcccagcgtgtccatggtctcgctggtatattttcct 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 gacctgcaggtctaaaatctattgcccagcgtgtccatggtctcgctggtatattttcct 1500
Query: 1502 tagggttgaacaagcttggggttgcagaagttcaagaacttcctttctttgacactgtta 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 tagggttgaacaagcttggggttgcagaagttcaagaacttcctttctttgacactgtta 1560
Query: 1562 aaattaagtgttcggatgcacatgcaattgctgatgcagcttccaaaagtgaaattaatc 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 aaattaagtgttcggatgcacatgcaattgctgatgcagcttccaaaagtgaaattaatc 1620
Query: 1622 tgcgtgttgtggactcaaccactattactgcttcctttgacgaaacaaccaccttggatg 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 tgcgtgttgtggactcaaccactattactgcttcctttgacgaaacaaccaccttggatg 1680
Query: 1682 atgtcgataaacttttcaaagtttttgcttctggcaagcctgttccatttacggctgaat 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 atgtcgataaacttttcaaagtttttgcttctggcaagcctgttccatttacggctgaat 1740
Query: 1742 ctctagcacccgaggttcagaattccattccttctagcctaacaagagagagtccttatc 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 ctctagcacccgaggttcagaattccattccttctagcctaacaagagagagtccttatc 1800
Query: 1802 ttacccacccaatcttcaacatgtaccacacagagcatgagttgcttaggtacatccaca 1861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 ttacccacccaatcttcaacatgtaccacacagagcatgagttgcttaggtacatccaca 1860
Query: 1862 agttacagtcaaaggatctatcactgtgccacagcatgattccgttgggatcttgtacga 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 agttacagtcaaaggatctatcactgtgccacagcatgattccgttgggatcttgtacga 1920
Query: 1922 tgaaactaaatgcaacaactgaaatgatgccagtcacatggccaagtttcactgacattc 1981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 tgaaactaaatgcaacaactgaaatgatgccagtcacatggccaagtttcactgacattc 1980
Query: 1982 acccttttgctcctgttgaacaagcacaaggttatcaggaaatgttcgaaaatttgggtg 2041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 acccttttgctcctgttgaacaagcacaaggttatcaggaaatgttcgaaaatttgggtg 2040
Query: 2042 acctcttgtgtacgatcactgggtttgactctttctcgttgcaacctaatgctggtgctg 2101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 acctcttgtgtacgatcactgggtttgactctttctcgttgcaacctaatgctggtgctg 2100
Query: 2102 ctggtgagtatgccgggcttatggttatccgcgcatatcacatgtcaagaggagatcatc 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 ctggtgagtatgccgggcttatggttatccgcgcatatcacatgtcaagaggagatcatc 2160
Query: 2162 accgtaatgtgtgtatcatacctgtctctgcacacggtacaaaccctgcaagtgctgcta 2221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 accgtaatgtgtgtatcatacctgtctctgcacacggtacaaaccctgcaagtgctgcta 2220
Query: 2222 tgtgcgggatgaaaattattacagttggaactgatgctaagggaaacattaacattgagg 2281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 tgtgcgggatgaaaattattacagttggaactgatgctaagggaaacattaacattgagg 2280
Query: 2282 aggtgagaaaagctgcagaagccaacaaagacaacttagctgctcttatggttacatacc 2341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 aggtgagaaaagctgcagaagccaacaaagacaacttagctgctcttatggttacatacc 2340
Query: 2342 cttcaactcatggagtctatgaagagggcatcgacgagatttgcaacataatacacgaaa 2401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 cttcaactcatggagtctatgaagagggcatcgacgagatttgcaacataatacacgaaa 2400
Query: 2402 atggaggtcaagtgtacatggatggtgccaacatgaatgcacaggttggtttgacgagcc 2461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 atggaggtcaagtgtacatggatggtgccaacatgaatgcacaggttggtttgacgagcc 2460
Query: 2462 ctggttttattggagcggatgtgtgccatctcaatctccacaagaccttctgtattcctc 2521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 ctggttttattggagcggatgtgtgccatctcaatctccacaagaccttctgtattcctc 2520
Query: 2522 atggaggtggtggtcctggtatgggtcccattggtgtgaagaatcatttggcaccatttc 2581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 atggaggtggtggtcctggtatgggtcccattggtgtgaagaatcatttggcaccatttc 2580
Query: 2582 ttccttctcaccccgtgataccgactggtggtatcccacaacccgagaagacagcacctt 2641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2581 ttccttctcaccccgtgataccgactggtggtatcccacaacccgagaagacagcacctt 2640
Query: 2642 tgggtgcaatatccgctgcaccatggggatctgcgcttatcttgcctatatcttatactt 2701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2641 tgggtgcaatatccgctgcaccatggggatctgcgcttatcttgcctatatcttatactt 2700
Query: 2702 acattgccatgatgggatctggtgggctcactgatgcctctaagattgcaattttgaatg 2761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2701 acattgccatgatgggatctggtgggctcactgatgcctctaagattgcaattttgaatg 2760
Query: 2762 ccaattacatggcaaagcgcctagagaaacactacccagttcttttccgtggtgttaacg 2821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2761 ccaattacatggcaaagcgcctagagaaacactacccagttcttttccgtggtgttaacg 2820
Query: 2822 gaacagtagcacacgaattcatcatagacttgagaggcttcaagaacactgctggaatag 2881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2821 gaacagtagcacacgaattcatcatagacttgagaggcttcaagaacactgctggaatag 2880
Query: 2882 aaccagaggatgtggcgaaacggctaatggactatggattccatggacccacaatgtctt 2941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2881 aaccagaggatgtggcgaaacggctaatggactatggattccatggacccacaatgtctt 2940
Query: 2942 ggcctgtccctggaactcttatgattgagccaaccgagagtgaaagcaaggcggagctag 3001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 ggcctgtccctggaactcttatgattgagccaaccgagagtgaaagcaaggcggagctag 3000
Query: 3002 acaggttctgcgatgctctcatttcaatcagggaagaaattgcacagattgaaaaaggaa 3061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 acaggttctgcgatgctctcatttcaatcagggaagaaattgcacagattgaaaaaggaa 3060
Query: 3062 atgcagatgtccagaacaacgttctcaagggagctccacatcccccatcgttgctaatgg 3121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3061 atgcagatgtccagaacaacgttctcaagggagctccacatcccccatcgttgctaatgg 3120
Query: 3122 cagacacatggaaaaagccgtattctcgagagtatgctgctttccctgcgccttggctcc 3181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3121 cagacacatggaaaaagccgtattctcgagagtatgctgctttccctgcgccttggctcc 3180
Query: 3182 gctcctccaagttctggcccaccacagggcgtgtggacaatgtatatggagacaggaaac 3241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 gctcctccaagttctggcccaccacagggcgtgtggacaatgtatatggagacaggaaac 3240
Query: 3242 tggtgtgcactctcctcccagaggaagaacaagtcgcagctgcagtgtctgcttgattac 3301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 tggtgtgcactctcctcccagaggaagaacaagtcgcagctgcagtgtctgcttgattac 3300
Query: 3302 tgctctgtcccattgtgttgtgtccctttctctcaccacgcactcttctctttcacattc 3361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3301 tgctctgtcccattgtgttgtgtccctttctctcaccacgcactcttctctttcacattc 3360
Query: 3362 tgtccatagtgttctcattatacgctttctgtctcttactctattatttcattcgaatac 3421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3361 tgtccatagtgttctcattatacgctttctgtctcttactctattatttcattcgaatac 3420
Query: 3422 atcttctataaattatatattccacaattgaccgaaaacaaaacacaaactttggtag 3479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3421 atcttctataaattatatattccacaattgaccgaaaacaaaacacaaactttggtag 3478
>At2g26080.1 68415.m03131 glycine dehydrogenase [decarboxylating], putative /
glycine decarboxylase, putative / glycine cleavage system
P-protein, putative strong similarity to SP|P26969
Glycine dehydrogenase [decarboxylating], mitochondrial
precursor (EC 1.4.4.2) {Pisum sativum}; contains Pfam
profile PF02347: Glycine cleavage system P-protein
Length = 3487
Score = 2565 bits (1294), Expect = 0.0
Identities = 2411/2782 (86%), Gaps = 6/2782 (0%)
Strand = Plus / Plus
Query: 520 aaatcgattcgattagattccatgaagttctcc---aaattcgacgctggtttaaccgag 576
||||||||||| |||||||| |||||||| ||| | ||| || | || ||||| |||
Sbjct: 394 aaatcgattcggttagattcgatgaagttttccgggatatttgatgaaggattaacggag 453
Query: 577 agccaaatgattcaacacatggttgatttagcttccaagaacaaggttttcaaatccttc 636
|| ||||||||| | || ||| |||||||||||| |||||||| ||||||||||| |||
Sbjct: 454 agtcaaatgattgagcatatgagtgatttagcttcgaagaacaaagttttcaaatcgttc 513
Query: 637 atcgggatgggttactacaacactcatgtccctactgtcattctccgtaacatcatggag 696
|| || ||||| ||||| ||||||||||| ||| |||| ||| | ||||| || ||||||
Sbjct: 514 attggtatgggatactataacactcatgttcctcctgtgattttgcgtaatataatggag 573
Query: 697 aatccagcttggtacactcaatacactccttatcaagctgagatctctcaaggtcgtctc 756
||||| |||||||| |||||||| |||||||||||||||||||| |||||||| | |||
Sbjct: 574 aatcctgcttggtatactcaatatactccttatcaagctgagatttctcaaggaagactc 633
Query: 757 gaatcgctcctcaatttccagaccgtgatcacagatctcacgggtcttcctatgtccaat 816
||||| || ||||||| |||||| || || || |||||||| ||||| || ||||| ||
Sbjct: 634 gaatctctgctcaattaccagacggttattactgatctcaccggtctaccgatgtcgaac 693
Query: 817 gcgtcgcttctggatgaaggcactgctgctgcggaggcaatggccatgtgtaacaacatt 876
|| ||| | || |||||||| || || || ||||| |||||||| |||||||| || |||
Sbjct: 694 gcttcgttgctcgatgaaggtacggcggcggcggaagcaatggcgatgtgtaataatatt 753
Query: 877 cttaagggtaaaaagaagacctttgtcattgctagtaactgtcaccctcagactattgat 936
|| ||||| || |||||||| ||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 754 ctaaaggggaagaagaagacgtttgttattgctagtaattgtcatcctcagactattgat 813
Query: 937 gtttgtaagactagagctgatgggtttgatttgaaagttgtcacctctgatcttaaggat 996
||||| ||||| ||||| ||||| || |||||||||||||| || |||| ||||||||
Sbjct: 814 gtttgcaagacgagagcggatggtttcgatttgaaagttgtgacggttgatattaaggat 873
Query: 997 atagattacagctctggtgatgtttgtggggttcttgttcagtatcctggtactgaaggt 1056
| ||||| |||||||||||||| ||||| || | ||||||||||| || ||||||||
Sbjct: 874 gtggattatagctctggtgatgtgtgtggagtgttggttcagtatccggggactgaaggg 933
Query: 1057 gaagtcttggattatgctgagtttgttaagaatgctcatgctaatggtgttaaggttgtg 1116
|| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 gaggtgttggattatggtgagtttgttaagaatgctcatgctaatggtgttaaggttgtt 993
Query: 1117 atggctacggatttgctggctttgactgtgttgaaacctcctggagaatttggggcggat 1176
||||||||||||||| |||||||||| |||||||||| || || || ||||||||||||
Sbjct: 994 atggctacggatttgttggctttgacgatgttgaaaccgccgggtgagtttggggcggat 1053
Query: 1177 attgttgttggctctgctcaaaggtttggtgttccgatgggttatggtggtcctcatgct 1236
||||||||||| || | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 attgttgttgggtcgggtcagaggtttggtgttccgatgggttatggtggtcctcatgct 1113
Query: 1237 gcgttcttggctacttcacaagagtataagagaatgatgcctgggaggattattggtatt 1296
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1114 gctttcttggctacttcacaagagtataagagaatgatgcctgggaggattattggtgtt 1173
Query: 1297 agtgttgattcttcaggaaagcaagctctgcgtatggctatgcagactagagaacagcat 1356
|||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 1174 agtgttgattcttccgggaagcaagctttgcgtatggctatgcagactagggaacagcat 1233
Query: 1357 attaggagggacaaagccactagcaacatctgtactgctcaagcgttgcttgccaacatg 1416
|| | ||||| ||||| || |||||||||||||| ||||| || |||||||| || |||
Sbjct: 1234 atccgcagggataaagctaccagcaacatctgtaccgctcaggccttgcttgcaaatatg 1293
Query: 1417 gctgccatgtatgctgtttaccatggacctgcaggtctaaaatctattgcccagcgtgtc 1476
|||| ||||||||||||||||||||||| | ||| ||||||||||||| || || ||
Sbjct: 1294 actgctatgtatgctgtttaccatggaccagaaggcttaaaatctattgcacaacgggtt 1353
Query: 1477 catggtctcgctggtatattttccttagggttgaacaagcttggggttgcagaagttcaa 1536
||||||||||||||| ||||| ||||||| ||||| || || || |||| |||| |||
Sbjct: 1354 catggtctcgctggtgtatttgccttaggattgaagaaactgggaactgcacaagtccaa 1413
Query: 1537 gaacttcctttctttgacactgttaaaattaagtgttcggatgcacatgcaattgctgat 1596
|| ||||| |||||||||||||| ||| ||| ||||| |||||| ||||||| ||||
Sbjct: 1414 gatcttcccttctttgacactgtcaaagttacatgttcagatgcaactgcaatttttgat 1473
Query: 1597 gcagcttccaaaagtgaaattaatctgcgtgttgtggactcaaccactattactgcttcc 1656
| || |||| | || || ||| ||||| |||||||||| | ||||||||||| | |
Sbjct: 1474 gtggcagccaagaaggagatcaatttgcgtcttgtggactccaacactattactgttgct 1533
Query: 1657 tttgacgaaacaaccaccttggatgatgtcgataaacttttcaaagtttttgcttctggc 1716
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 1534 ttcgatgaaacaaccaccttggatgatgtcgataaactttttgaagtttttgcttcgggc 1593
Query: 1717 aagcctgttccatttacggctgaatctctagcacccgaggttcagaattccattccttct 1776
||||| |||| ||| |||||||| ||||| ||||| ||| || | ||| | ||||| |||
Sbjct: 1594 aagcccgttcaattcacggctgagtctcttgcaccggagtttaacaatgctattccctct 1653
Query: 1777 agcctaacaagagagagtccttatcttacccacccaatcttcaacatgtaccacacagag 1836
||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 1654 agcctaacaagagagagcccttatctgacccatccaatcttcaacatgtaccacacggag 1713
Query: 1837 catgagttgcttaggtacatccacaagttacagtcaaaggatctatcactgtgccacagc 1896
|||||||||||||||||||||||||||||||| || ||||||||| |||||||||||
Sbjct: 1714 catgagttgcttaggtacatccacaagttacaaaataaagatctatcattgtgccacagc 1773
Query: 1897 atgattccgttgggatcttgtacgatgaaactaaatgcaacaactgaaatgatgccagtc 1956
|||||||| | |||||||||||||||||| | ||||| || ||||||||||||||||||
Sbjct: 1774 atgattccacttggatcttgtacgatgaaattgaatgccaccactgaaatgatgccagtc 1833
Query: 1957 acatggccaagtttcactgacattcacccttttgctcctgttgaacaagcacaaggttat 2016
||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||
Sbjct: 1834 acatggccaagtttcaccaacatgcacccttttgctcctgttgaacaagcccaaggttat 1893
Query: 2017 caggaaatgttcgaaaatttgggtgacctcttgtgtacgatcactgggtttgactctttc 2076
||||||||||| ||||||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 1894 caggaaatgtttacgaatttgggtgagctcttatgtacgatcactggattcgactctttc 1953
Query: 2077 tcgttgcaacctaatgctggtgctgctggtgagtatgccgggcttatggttatccgcgca 2136
|| |||||||||||||| ||||||||||| ||||| |||||||| ||||||||||| |||
Sbjct: 1954 tcattgcaacctaatgccggtgctgctggcgagtacgccgggctcatggttatccgtgca 2013
Query: 2137 tatcacatgtcaagaggagatcatcaccgtaatgtgtgtatcatacctgtctctgcacac 2196
||||| ||||||||||| ||||||||| | |||||||| ||||||||||| |||||||||
Sbjct: 2014 tatcatatgtcaagaggcgatcatcacagaaatgtgtgcatcatacctgtttctgcacac 2073
Query: 2197 ggtacaaaccctgcaagtgctgctatgtgcgggatgaaaattattacagttggaactgat 2256
|| ||||||||||| |||||||| |||||||| ||||||||| || | ||||||||||||
Sbjct: 2074 gggacaaaccctgctagtgctgccatgtgcggaatgaaaattgttgccgttggaactgat 2133
Query: 2257 gctaagggaaacattaacattgaggaggtgagaaaagctgcagaagccaacaaagacaac 2316
|| || |||||||||||||| || ||| |||| || || || ||||||||||| ||||||
Sbjct: 2134 gccaaaggaaacattaacatcgaagagttgaggaacgccgccgaagccaacaaggacaac 2193
Query: 2317 ttagctgctcttatggttacatacccttcaactcatggagtctatgaagagggcatcgac 2376
|| |||||||||||||||||||||||||| || ||||||||||| |||||||| ||||||
Sbjct: 2194 ttggctgctcttatggttacatacccttccacccatggagtctacgaagagggtatcgac 2253
Query: 2377 gagatttgcaacataatacacgaaaatggaggtcaagtgtacatggatggtgccaacatg 2436
||||| ||||||||||| || ||||||||||| ||||| || ||||||||||| || |||
Sbjct: 2254 gagatctgcaacataattcatgaaaatggaggccaagtttatatggatggtgctaatatg 2313
Query: 2437 aatgcacaggttggtttgacgagccctggttttattggagcggatgtgtgccatctcaat 2496
||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 2314 aatgcacaggtgggtttgacaagccctggttttattggagcggatgtttgccatctcaat 2373
Query: 2497 ctccacaagaccttctgtattcctcatggaggtggtggtcctggtatgggtcccattggt 2556
|||||||||||||||||||| ||||| |||||||| ||||| || ||||| || || |||
Sbjct: 2374 ctccacaagaccttctgtatccctcacggaggtggaggtcccggaatgggccctatcggt 2433
Query: 2557 gtgaagaatcatttggcaccatttcttccttctcaccccgtgataccgactggtggtatc 2616
|||||| | |||||||| ||||| || ||||||||||| |||||||| || |||||||||
Sbjct: 2434 gtgaagcaacatttggctccattcctaccttctcacccagtgatacctaccggtggtatc 2493
Query: 2617 ccacaacccgagaagacagcacctttgggtgcaatatccgctgcaccatggggatctgcg 2676
|| |||||||| ||||| |||| |||| | || || || ||||||||||| ||||||
Sbjct: 2494 cctgaacccgagcagacatcaccgctgggaaccatttctgcagcaccatgggggtctgcg 2553
Query: 2677 cttatcttgcctatatcttatacttacattgccatgatgggatctggtgggctcactgat 2736
||||||||||| || || ||||||||||||||||||||||||||||| || ||||| |||
Sbjct: 2554 cttatcttgccaatctcgtatacttacattgccatgatgggatctggaggactcaccgat 2613
Query: 2737 gcctctaagattgcaattttgaatgccaattacatggcaaagcgcctagagaaacactac 2796
||||| ||||||||||||||||| || || |||||||||||||| || |||| ||||||
Sbjct: 2614 gcctcaaagattgcaattttgaacgctaactacatggcaaagcgtctggagagccactac 2673
Query: 2797 ccagttcttttccgtggtgttaacggaacagtagcacacgaattcatcatagacttgaga 2856
|||||||||||||||||||| || |||||||| || |||||||||||||| |||||||||
Sbjct: 2674 ccagttcttttccgtggtgtcaatggaacagtcgctcacgaattcatcattgacttgaga 2733
Query: 2857 ggcttcaagaacactgctggaatagaaccagaggatgtggcgaaacggctaatggactat 2916
|| |||||||||||||||||||| ||||||||||||||||| ||||| | ||||| |||
Sbjct: 2734 ggattcaagaacactgctggaattgaaccagaggatgtggccaaacgattgatggattat 2793
Query: 2917 ggattccatggacccacaatgtcttggcctgtccctggaactcttatgattgagccaacc 2976
|| ||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2794 ggtttccatggaccgacaatgtcttggcctgtccctggaacgcttatgatcgagccaacc 2853
Query: 2977 gagagtgaaagcaaggcggagctagacaggttctgcgatgctctcatttcaatcagggaa 3036
|| || ||||||||||| ||| |||| |||||||| ||||||||||| || |||||||||
Sbjct: 2854 gaaagcgaaagcaaggctgagttagataggttctgtgatgctctcatctcgatcagggaa 2913
Query: 3037 gaaattgcacagattgaaaaaggaaatgcagatgtccagaacaacgttctcaagggagct 3096
|| ||| |||||||||| |||||||| |||||| | ||||||||||| ||||| |||
Sbjct: 2914 gagatttcacagattgagaaaggaaacgcagatccaaacaacaacgttctgaagggtgct 2973
Query: 3097 ccacatcccccatcgttgctaatggcagacacatggaaaaagccgtattctcgagagtat 3156
|||||||| || || |||||||||||||| |||||||||||||||||||| || || ||
Sbjct: 2974 ccacatcctccgtcattgctaatggcagatacatggaaaaagccgtattcacgggaatac 3033
Query: 3157 gctgctttccctgcgccttggctccgctcctccaagttctggcccaccacagggcgtgtg 3216
|| || ||||| || || ||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 3034 gcagccttccccgctccatggctccgctcctccaagttctggcccactacagggcgagtg 3093
Query: 3217 gacaatgtatatggagacaggaaactggtgtgcactctcctcccagag---gaagaacaa 3273
||||| || ||||||||| | || |||||||||||||||| || | | ||||||||
Sbjct: 3094 gacaacgtgtatggagaccgtaatctggtgtgcactctccaaccggcgaacgaagaacag 3153
Query: 3274 gtcgcagctgcagtgtctgctt 3295
| |||||||||||||||||||
Sbjct: 3154 gctgcagctgcagtgtctgctt 3175
Score = 103 bits (52), Expect = 1e-20
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 184 atggagcgcgcaaggagacttgcttacagaggaatcgtcaaacgtctcgttaacgacaca 243
|||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct: 43 atggagcgtgcaaggagacttgcttacagagggatcgtgaaacgtctcgtcaacgagaca 102
Query: 244 aaacgacaccgtaacg 259
||||| ||||||||||
Sbjct: 103 aaacgccaccgtaacg 118
Score = 48.1 bits (24), Expect = 5e-04
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 385 atctccgtcgatgctgttaaacccagcgatactttccctcgtcgtcacaactctgcaaca 444
|||||||||||||| | || || ||||| |||||||| || || |||||||| ||||||
Sbjct: 259 atctccgtcgatgcgttgaagccaagcgacactttcccgcgccggcacaactcagcaaca 318
Query: 445 ccagacgaacaa 456
|| || ||||||
Sbjct: 319 ccggatgaacaa 330
>At3g46020.1 68416.m04979 RNA-binding protein, putative similar to Cold-inducible
RNA-binding protein (Glycine-rich RNA-binding protein
CIRP) from {Homo sapiens} SP|Q14011, {Rattus norvegicus}
SP|Q61413,{Xenopus laevis}; SP|O93235; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 340
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1235 ctgcgttcttggctacttca 1254
||||||||||||||||||||
Sbjct: 259 ctgcgttcttggctacttca 240
>At1g59850.1 68414.m06741 expressed protein
Length = 1497
Score = 40.1 bits (20), Expect = 0.12
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 841 gctgctgcggaggcaatggc 860
||||||||||||||||||||
Sbjct: 727 gctgctgcggaggcaatggc 746
>At5g37475.1 68418.m04510 translation initiation factor-related similar to
Eukaryotic translation initiation factor 3 subunit 1
(eIF-3 alpha) (eIF3 p35) (eIF3j) (Swiss-Prot:O75822)
[Homo sapiens]
Length = 1105
Score = 38.2 bits (19), Expect = 0.49
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1061 tcttggattatgctgagtt 1079
|||||||||||||||||||
Sbjct: 575 tcttggattatgctgagtt 593
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 97,282
Number of Sequences: 29161
Number of extensions: 97282
Number of successful extensions: 2186
Number of sequences better than 10.0: 41
length of query: 3479
length of database: 44,058,232
effective HSP length: 19
effective length of query: 3460
effective length of database: 43,504,173
effective search space: 150524438580
effective search space used: 150524438580
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)