BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BT010599.F
(1995 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01440.1 68414.m00059 extra-large G-protein-related weak... 3955 0.0
At4g01090.1 68417.m00147 extra-large G-protein-related cont... 297 2e-79
At3g61670.1 68416.m06911 expressed protein weak similarity ... 60 8e-08
At2g46380.1 68415.m05773 hypothetical protein weak similari... 46 0.001
At4g29360.2 68417.m04195 glycosyl hydrolase family 17 prote... 42 0.018
>At1g01440.1 68414.m00059 extra-large G-protein-related weak similarity to
extra-large G-protein (AtXLG1) (GI:3201682) [Arabidopsis
thaliana]
Length = 1995
Score = 3955 bits (1995), Expect = 0.0
Identities = 1995/1995 (100%)
Strand = Plus / Plus
Query: 1 atgaggacaagcggtgacgtttatggagcagatactggttcctcaagaagtgatgaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgaggacaagcggtgacgtttatggagcagatactggttcctcaagaagtgatgaagac 60
Query: 61 agaggctttaaggaggatctcaatgaatccgctactagcccgatgagaaatcgcctagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaggctttaaggaggatctcaatgaatccgctactagcccgatgagaaatcgcctagac 120
Query: 121 gattcgaattcacgacctggttctcagagattcgtcaagagctcgagaaaggaggaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gattcgaattcacgacctggttctcagagattcgtcaagagctcgagaaaggaggaagag 180
Query: 181 actgattcagattcttcttcttctaagaacacaaccaccagaaacaacccaattcagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actgattcagattcttcttcttctaagaacacaaccaccagaaacaacccaattcagtac 240
Query: 241 actgataaacaacaagccgagcttttgagaaagcttgattctattaaagatcatcttctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actgataaacaacaagccgagcttttgagaaagcttgattctattaaagatcatcttctc 300
Query: 301 cgtggtggaggtaataatgctactgttgttgatcagccaccaatgggtttccatgcccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgtggtggaggtaataatgctactgttgttgatcagccaccaatgggtttccatgcccat 360
Query: 361 catggacctcctccttcttattacaatccataccctgagccatttccttatggaatgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catggacctcctccttcttattacaatccataccctgagccatttccttatggaatgtat 420
Query: 421 cctaccgcgagtaaccaacctcatgttccagcttatagagacccttatggattcccagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctaccgcgagtaaccaacctcatgttccagcttatagagacccttatggattcccagtg 480
Query: 481 cataggatacctcaaaacttttatcaaggaccaagtcattaccctaatcagatgccgcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cataggatacctcaaaacttttatcaaggaccaagtcattaccctaatcagatgccgcct 540
Query: 541 cgtccaccctatcctcaaggacagtatgtagacattggctctgatatacttgagtcacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgtccaccctatcctcaaggacagtatgtagacattggctctgatatacttgagtcacag 600
Query: 601 ttacaggaccctagattctttccgggtacgccaagtaggtatggtgatgtcccatttagc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttacaggaccctagattctttccgggtacgccaagtaggtatggtgatgtcccatttagc 660
Query: 661 ccggctttgcaccacggtgagaaagttggaccctttagtccacatggtggtgttcacacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccggctttgcaccacggtgagaaagttggaccctttagtccacatggtggtgttcacacg 720
Query: 721 aggtggcctagtgaaattgattctgaaatgggtggtgcttttgctcgtgggtatgttcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aggtggcctagtgaaattgattctgaaatgggtggtgcttttgctcgtgggtatgttcaa 780
Query: 781 caagctgtgtctgatactgattcacgtcgttgccatcctctagcaggcggtgcgcctttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 caagctgtgtctgatactgattcacgtcgttgccatcctctagcaggcggtgcgcctttt 840
Query: 841 attgcttgtcacagttgctttgagctgctatatgtgcctaagaagaagcttcttggtcag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 attgcttgtcacagttgctttgagctgctatatgtgcctaagaagaagcttcttggtcag 900
Query: 901 gaaaggcaacaaaagatgcaatgtggtgcttgttctgaggttatcacgttcagagttgtt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaaaggcaacaaaagatgcaatgtggtgcttgttctgaggttatcacgttcagagttgtt 960
Query: 961 gataagaagcttgttttctcatcttctgccctgggggaaactacgaaccgggtttctgta 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gataagaagcttgttttctcatcttctgccctgggggaaactacgaaccgggtttctgta 1020
Query: 1021 gaggttgaagatagaagctcaccaatccctgtggtagatgattatccactcaatgatgaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gaggttgaagatagaagctcaccaatccctgtggtagatgattatccactcaatgatgaa 1080
Query: 1081 gaaccaagaatacaccaggaaacgaaaattgtccatgctgtatcgcctagtgatcactca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gaaccaagaatacaccaggaaacgaaaattgtccatgctgtatcgcctagtgatcactca 1140
Query: 1141 aacgatgaagacaggtcaagcatttctagtgagccgcggaaacaggtcgtcaagtctgtt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aacgatgaagacaggtcaagcatttctagtgagccgcggaaacaggtcgtcaagtctgtt 1200
Query: 1201 cgcagcagagcccaaggcgcgaaggttcctcctcctcctcctccggaaaagtccaatctt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 cgcagcagagcccaaggcgcgaaggttcctcctcctcctcctccggaaaagtccaatctt 1260
Query: 1261 cttgagctctttgagtattctaatgtaaaccgagctgcaatcacttacggaatggcgcag 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 cttgagctctttgagtattctaatgtaaaccgagctgcaatcacttacggaatggcgcag 1320
Query: 1321 ttagggtactataagcaagaatcatacacgaaacaagactccctgaaatcagaatcagta 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ttagggtactataagcaagaatcatacacgaaacaagactccctgaaatcagaatcagta 1380
Query: 1381 gctactgagacagatgtttcttataatgagtactatactaacaccgaggagtctgaagat 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 gctactgagacagatgtttcttataatgagtactatactaacaccgaggagtctgaagat 1440
Query: 1441 tcaaggatctcaaaagccagcaaagaagggagacgaccaagaaaccgaaagcagagtagt 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tcaaggatctcaaaagccagcaaagaagggagacgaccaagaaaccgaaagcagagtagt 1500
Query: 1501 gagcacagtttcgcagaggtcacaaataatatcagttctaacgaccaaaacaacgagcag 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gagcacagtttcgcagaggtcacaaataatatcagttctaacgaccaaaacaacgagcag 1560
Query: 1561 ctagaggtttgggtgaatgggtatctgataccagaagatctggttattagcgctgagaaa 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ctagaggtttgggtgaatgggtatctgataccagaagatctggttattagcgctgagaaa 1620
Query: 1621 caagctgggccagttcaagctggcaaatactggtatgattaccgtgctggattctgggga 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 caagctgggccagttcaagctggcaaatactggtatgattaccgtgctggattctgggga 1680
Query: 1681 gtgatgggaaacccttgtctcggtataataccaccatttatagaggagtttagtcgacca 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1681 gtgatgggaaacccttgtctcggtataataccaccatttatagaggagtttagtcgacca 1740
Query: 1741 atgccggataactgcggtgcaggaaacacgagtgtgtttgtaaacggaagagagcttcac 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 atgccggataactgcggtgcaggaaacacgagtgtgtttgtaaacggaagagagcttcac 1800
Query: 1801 gagagagacctagagttactatcaagtagaggtcttcctcgaggcaagaaccgttcttac 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 gagagagacctagagttactatcaagtagaggtcttcctcgaggcaagaaccgttcttac 1860
Query: 1861 atcattgatatagcaggaagagttcttgatggagactctggtgaagaacttaagagtctt 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 atcattgatatagcaggaagagttcttgatggagactctggtgaagaacttaagagtctt 1920
Query: 1921 ggcagattagctccaacggttgacaaggtgaagcatggatttggcatgagggttccaaga 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 ggcagattagctccaacggttgacaaggtgaagcatggatttggcatgagggttccaaga 1980
Query: 1981 tcattagtctcgtga 1995
|||||||||||||||
Sbjct: 1981 tcattagtctcgtga 1995
>At4g01090.1 68417.m00147 extra-large G-protein-related contains weak similarity
to extra-large G-protein [Arabidopsis thaliana]
gi|3201682|gb|AAC19353
Length = 2884
Score = 297 bits (150), Expect = 2e-79
Identities = 357/426 (83%)
Strand = Plus / Plus
Query: 1562 tagaggtttgggtgaatgggtatctgataccagaagatctggttattagcgctgagaaac 1621
||||||||||||| ||||| |||| |||||||||||||| |||| || |||||||||
Sbjct: 2143 tagaggtttgggttaatggacatcttataccagaagatcttgttagcagtgctgagaaat 2202
Query: 1622 aagctgggccagttcaagctggcaaatactggtatgattaccgtgctggattctggggag 1681
|||||| ||| | |||||||| || || |||||||||||||| ||||| ||||||||||
Sbjct: 2203 tagctggaccaatccaagctggaaagtattggtatgattaccgagctgggttctggggag 2262
Query: 1682 tgatgggaaacccttgtctcggtataataccaccatttatagaggagtttagtcgaccaa 1741
||||||| || || ||||||||||||||||| |||||||| || |||||||| | ||||
Sbjct: 2263 tgatgggcaaaccgtgtctcggtataatacctccatttattgaagagtttagccatccaa 2322
Query: 1742 tgccggataactgcggtgcaggaaacacgagtgtgtttgtaaacggaagagagcttcacg 1801
||| ||||||||||| |||||||||||| |||||||| || |||||||||||||||
Sbjct: 2323 tgctggataactgcgctgcaggaaacacagacgtgtttgtgaatggaagagagcttcaca 2382
Query: 1802 agagagacctagagttactatcaagtagaggtcttcctcgaggcaagaaccgttcttaca 1861
||||||| | |||||||| || | ||||| ||| ||| |||||||||||||||||
Sbjct: 2383 agagagatttcgagttacttgtgggtcgtggtctgcctagagacaagaaccgttcttaca 2442
Query: 1862 tcattgatatagcaggaagagttcttgatggagactctggtgaagaacttaagagtcttg 1921
| |||||||| |||||||| | |||||| ||| || || ||||||||| | || ||||
Sbjct: 2443 ttgttgatatatcaggaagaatccttgatcaagattcaggagaagaacttcacagccttg 2502
Query: 1922 gcagattagctccaacggttgacaaggtgaagcatggatttggcatgagggttccaagat 1981
||| |||||| |||||| |||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 2503 gcaaattagccccaacgattgagaaagtgaagcatggatttggtatgagagttccaagat 2562
Query: 1982 cattag 1987
||||||
Sbjct: 2563 cattag 2568
Score = 167 bits (84), Expect = 5e-40
Identities = 189/224 (84%)
Strand = Plus / Plus
Query: 721 aggtggcctagtgaaattgattctgaaatgggtggtgcttttgctcgtgggtatgttcaa 780
|||||||| |||||| ||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 1269 aggtggccgagtgaacatgattctgaaatgggcggtgcttttgctcgtgggtatgttaag 1328
Query: 781 caagctgtgtctgatactgattcacgtcgttgccatcctctagcaggcggtgcgcctttt 840
||||||| || ||||||| | || ||||| |||||||| || || ||||| ||||||
Sbjct: 1329 aaagctgtatcggatactggtgttcgacgttgtcatcctcttgctggtggtgctcctttt 1388
Query: 841 attgcttgtcacagttgctttgagctgctatatgtgcctaagaagaagcttcttggtcag 900
|| |||||||| ||||||||||||||||| || ||||||||||||||||| | ||||
Sbjct: 1389 atagcttgtcatagttgctttgagctgctttacttgcctaagaagaagcttttgtctcag 1448
Query: 901 gaaaggcaacaaaagatgcaatgtggtgcttgttctgaggttat 944
|||||| ||| ||| |||| || |||||||||||||| |||||
Sbjct: 1449 gaaaggttacataagctgcagtgcggtgcttgttctgaagttat 1492
Score = 81.8 bits (41), Expect = 2e-14
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1261 cttgagctctttgagtattctaatgtaaaccgagctgcaatcacttacggaatggcgcag 1320
||||| || ||||||||||||||||||||| |||||||| || |||| ||||||||||||
Sbjct: 1863 cttgaactttttgagtattctaatgtaaacagagctgcactcgcttatggaatggcgcag 1922
Query: 1321 ttagg 1325
|||||
Sbjct: 1923 ttagg 1927
Score = 63.9 bits (32), Expect = 5e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 1357 gactccctgaaatcagaatcagtagctactgagacagatgtttcttataatg 1408
||||| |||||| |||||||||||||||| |||||||| |||||||| ||||
Sbjct: 1968 gactcgctgaaaccagaatcagtagctacagagacagaggtttcttacaatg 2019
Score = 52.0 bits (26), Expect = 2e-05
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 195 ttcttcttctaagaacacaaccaccagaaacaacccaattcagtacactgataaacaaca 254
|||||| ||||||||||||| || ||| |||||||| ||| |||| || || | |||
Sbjct: 599 ttcttcatctaagaacacaagcagcagcaacaaccctattgagtatacagagcatgaacg 658
Query: 255 agccgagcttttgagaaagcttgattctattaaagatcatct 296
||| |||||||| |||| | | |||||||| |||||||||||
Sbjct: 659 agctgagcttttaagaaggttagattctatcaaagatcatct 700
Score = 40.1 bits (20), Expect = 0.071
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 515 gtcattaccctaatcagatg 534
||||||||||||||||||||
Sbjct: 955 gtcattaccctaatcagatg 974
Score = 36.2 bits (18), Expect = 1.1
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 1019 tagaggttgaagatagaa 1036
||||||||||||||||||
Sbjct: 1561 tagaggttgaagatagaa 1578
>At3g61670.1 68416.m06911 expressed protein weak similarity to extra-large
G-protein [Arabidopsis thaliana] GI:3201682
Length = 2863
Score = 60.0 bits (30), Expect = 8e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1648 tactggtatgattaccgtgctggattctggggagtgatggga 1689
||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 2379 tactggtatgattacagagctggattctggggagtaatggga 2420
>At2g46380.1 68415.m05773 hypothetical protein weak similarity to extra-large
G-protein [Arabidopsis thaliana] GI:3201682
Length = 2199
Score = 46.1 bits (23), Expect = 0.001
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1777 tttgtaaacggaagagagcttcacgagagagacct 1811
||||| |||||||||||||||||| ||| ||||||
Sbjct: 2035 tttgtgaacggaagagagcttcaccagaaagacct 2069
Score = 38.2 bits (19), Expect = 0.28
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1648 tactggtatgattaccgtgctggattctggggagt 1682
|||||||| || ||| | |||||||||||||||||
Sbjct: 1906 tactggtacgactacagagctggattctggggagt 1940
>At4g29360.2 68417.m04195 glycosyl hydrolase family 17 protein similar to elicitor
inducible chitinase Nt-SubE76 GI:11071974 from [Nicotiana
tabacum]
Length = 1885
Score = 42.1 bits (21), Expect = 0.018
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1224 ggttcctcctcctcctcctcc 1244
|||||||||||||||||||||
Sbjct: 1204 ggttcctcctcctcctcctcc 1184
Score = 38.2 bits (19), Expect = 0.28
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1227 tcctcctcctcctcctccg 1245
|||||||||||||||||||
Sbjct: 1198 tcctcctcctcctcctccg 1180
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 81,194
Number of Sequences: 29161
Number of extensions: 81194
Number of successful extensions: 3324
Number of sequences better than 10.0: 255
length of query: 1995
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1977
effective length of database: 43,533,334
effective search space: 86065401318
effective search space used: 86065401318
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)