BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.3.C1
(2691 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01060.1 68414.m00006 myb family transcription factor co... 5325 0.0
At1g01060.2 68414.m00007 myb family transcription factor co... 4823 0.0
At2g46830.1 68415.m05843 myb-related transcription factor (... 84 7e-15
At3g55470.1 68416.m06160 C2 domain-containing protein simil... 78 4e-13
At1g71270.1 68414.m08225 Vps52/Sac2 family protein similar ... 78 4e-13
>At1g01060.1 68414.m00006 myb family transcription factor contains Pfam profile:
PF00249 myb-like DNA-binding domain; identical to cDNA
LATE ELONGATED HYPOCOTYL MYB transcription factor
GI:3281845
Length = 2704
Score = 5325 bits (2686), Expect = 0.0
Identities = 2689/2690 (99%)
Strand = Plus / Plus
Query: 1 gcttctggcttctcttcttcttcttccagtcttcttcagcctaagacagtcttccttctt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 15 gcttctggcttctcttcttcttcttccagtcttcttcagcctaaaacagtcttccttctt 74
Query: 61 cttcttcttcttcttcttcttcttcttcttcagttatcttcttccttcttctctctgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 cttcttcttcttcttcttcttcttcttcttcagttatcttcttccttcttctctctgttt 134
Query: 121 tttaaatttatttttagagatttttttttgttttgcttccgatttgattatttccgggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tttaaatttatttttagagatttttttttgttttgcttccgatttgattatttccgggaa 194
Query: 181 cgatgacttctccggggagttcccggtgagatgataagtcagattgcatacttgtctcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cgatgacttctccggggagttcccggtgagatgataagtcagattgcatacttgtctcct 254
Query: 241 ccatggctactctcaagggttttggctgcggtggattcgtttggtttctctagaatctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ccatggctactctcaagggttttggctgcggtggattcgtttggtttctctagaatctaa 314
Query: 301 agaggttatcacaacggctttgcaatttgaaaactttcatgtttggggagatcaaagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agaggttatcacaacggctttgcaatttgaaaactttcatgtttggggagatcaaagatg 374
Query: 361 gtttcttttttatactttacttgttagagaggatttgaagcagcgaatagctgcaccggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtttcttttttatactttacttgttagagaggatttgaagcagcgaatagctgcaccggt 434
Query: 421 cctgttatggatactaatacatctggagaagaattattagctaaggcaagaaagccatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cctgttatggatactaatacatctggagaagaattattagctaaggcaagaaagccatat 494
Query: 481 acaataacaaagcagcgagagcgatggactgaggatgagcatgagaggtttctagaagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acaataacaaagcagcgagagcgatggactgaggatgagcatgagaggtttctagaagcc 554
Query: 541 ttgaggctttatggaagagcttggcaacgaattgaagaacatattgggacaaagactgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ttgaggctttatggaagagcttggcaacgaattgaagaacatattgggacaaagactgct 614
Query: 601 gttcagatcagaagtcatgcacaaaagttcttcacaaagttggagaaagaggctgaagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gttcagatcagaagtcatgcacaaaagttcttcacaaagttggagaaagaggctgaagtt 674
Query: 661 aaaggcatccctgtttgccaagctttggacatagaaattccgcctcctcgtcctaaacga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aaaggcatccctgtttgccaagctttggacatagaaattccgcctcctcgtcctaaacga 734
Query: 721 aaacccaatactccttatcctcgaaagcctgggaacaacggtacatcttcctctcaagta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aaacccaatactccttatcctcgaaagcctgggaacaacggtacatcttcctctcaagta 794
Query: 781 tcatcagcaaaagatgcaaaacttgtttcatcggcctcttcttcacagttgaatcaggcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tcatcagcaaaagatgcaaaacttgtttcatcggcctcttcttcacagttgaatcaggcg 854
Query: 841 ttcttggatttggaaaaaatgccgttctctgagaaaacatcaactggaaaagaaaatcaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 ttcttggatttggaaaaaatgccgttctctgagaaaacatcaactggaaaagaaaatcaa 914
Query: 901 gatgagaattgctcgggtgtttctactgtgaacaagtatcccttaccaacgaaacaggta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 gatgagaattgctcgggtgtttctactgtgaacaagtatcccttaccaacgaaacaggta 974
Query: 961 agtggcgacattgaaacaagtaagacctcaactgtggacaacgcggttcaagatgttccc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 agtggcgacattgaaacaagtaagacctcaactgtggacaacgcggttcaagatgttccc 1034
Query: 1021 aagaagaacaaagacaaagatggtaacgatggtactactgtgcacagcatgcaaaactac 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 aagaagaacaaagacaaagatggtaacgatggtactactgtgcacagcatgcaaaactac 1094
Query: 1081 ccttggcatttccacgcagatattgtgaacgggaatatagcaaaatgccctcaaaatcat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 ccttggcatttccacgcagatattgtgaacgggaatatagcaaaatgccctcaaaatcat 1154
Query: 1141 ccctcaggtatggtatctcaagacttcatgtttcatcctatgagagaagaaactcacggg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 ccctcaggtatggtatctcaagacttcatgtttcatcctatgagagaagaaactcacggg 1214
Query: 1201 cacgcaaatcttcaagctacaacagcatctgctactactacagcttctcatcaagcgttt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 cacgcaaatcttcaagctacaacagcatctgctactactacagcttctcatcaagcgttt 1274
Query: 1261 ccagcttgtcattcacaggatgattaccgttcgtttctccagatatcatctactttctcc 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 ccagcttgtcattcacaggatgattaccgttcgtttctccagatatcatctactttctcc 1334
Query: 1321 aatcttattatgtcaactctcctacagaatcctgcagctcatgctgcagctacattcgct 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 aatcttattatgtcaactctcctacagaatcctgcagctcatgctgcagctacattcgct 1394
Query: 1381 gcttcggtctggccttatgcgagtgtcgggaattctggtgattcatcaaccccaatgagc 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 gcttcggtctggccttatgcgagtgtcgggaattctggtgattcatcaaccccaatgagc 1454
Query: 1441 tcttctcctccaagtataactgccattgccgctgctacagtagctgctgcaactgcttgg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 tcttctcctccaagtataactgccattgccgctgctacagtagctgctgcaactgcttgg 1514
Query: 1501 tgggcttctcatggacttcttcctgtatgcgctccagctccaataacatgtgttccattc 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1515 tgggcttctcatggacttcttcctgtatgcgctccagctccaataacatgtgttccattc 1574
Query: 1561 tcaactgttgcagttccaactccagcaatgactgaaatggataccgttgaaaatactcaa 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1575 tcaactgttgcagttccaactccagcaatgactgaaatggataccgttgaaaatactcaa 1634
Query: 1621 ccgtttgagaaacaaaacacagctctgcaagatcaaaacttggcttcgaaatctccagct 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1635 ccgtttgagaaacaaaacacagctctgcaagatcaaaacttggcttcgaaatctccagct 1694
Query: 1681 tcatcatctgatgattcagatgagactggagtaaccaagctaaatgccgactcaaaaacc 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1695 tcatcatctgatgattcagatgagactggagtaaccaagctaaatgccgactcaaaaacc 1754
Query: 1741 aatgatgataaaattgaggaggttgttgttactgccgctgtgcatgactcaaacactgcc 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1755 aatgatgataaaattgaggaggttgttgttactgccgctgtgcatgactcaaacactgcc 1814
Query: 1801 cagaagaaaaatcttgtggaccgctcatcctgtggctcaaatacaccttcagggagtgac 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1815 cagaagaaaaatcttgtggaccgctcatcctgtggctcaaatacaccttcagggagtgac 1874
Query: 1861 gcagaaactgatgcattagataaaatggagaaagataaagaggatgtgaaggagacagat 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1875 gcagaaactgatgcattagataaaatggagaaagataaagaggatgtgaaggagacagat 1934
Query: 1921 gagaatcagccagatgttattgagttaaataaccgtaagattaaaatgagagacaacaac 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1935 gagaatcagccagatgttattgagttaaataaccgtaagattaaaatgagagacaacaac 1994
Query: 1981 agcaacaacaatgcaactactgattcgtggaaggaagtctccgaagagggtcgtatagcg 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1995 agcaacaacaatgcaactactgattcgtggaaggaagtctccgaagagggtcgtatagcg 2054
Query: 2041 tttcaggctctctttgcaagagaaagattgcctcaaagcttttcgcctcctcaagtggca 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2055 tttcaggctctctttgcaagagaaagattgcctcaaagcttttcgcctcctcaagtggca 2114
Query: 2101 gagaatgtgaatagaaaacaaagtgacacgtcaatgccattggctcctaatttcaaaagc 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2115 gagaatgtgaatagaaaacaaagtgacacgtcaatgccattggctcctaatttcaaaagc 2174
Query: 2161 caggattcttgtgctgcagaccaagaaggagtagtaatgatcggtgttggaacatgcaag 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2175 caggattcttgtgctgcagaccaagaaggagtagtaatgatcggtgttggaacatgcaag 2234
Query: 2221 agtcttaaaacgagacagacaggatttaagccatacaagagatgttcaatggaagtgaaa 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2235 agtcttaaaacgagacagacaggatttaagccatacaagagatgttcaatggaagtgaaa 2294
Query: 2281 gagagccaagttgggaacataaacaatcaaagtgatgaaaaagtctgcaaaaggcttcga 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2295 gagagccaagttgggaacataaacaatcaaagtgatgaaaaagtctgcaaaaggcttcga 2354
Query: 2341 ttggaaggagaagcttctacatgacagacttggaggtaaaaaaaaaacatccacattttt 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2355 ttggaaggagaagcttctacatgacagacttggaggtaaaaaaaaaacatccacattttt 2414
Query: 2401 atcaatatctttaaatctagtgttagtagtttgcttctccaatctttatgaaagagactt 2460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2415 atcaatatctttaaatctagtgttagtagtttgcttctccaatctttatgaaagagactt 2474
Query: 2461 ttaattttccttccgaacatttctttggtcatgtcaggttctgtaccatattaccccatg 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2475 ttaattttccttccgaacatttctttggtcatgtcaggttctgtaccatattaccccatg 2534
Query: 2521 tcttgtctcttgtctctgtttgtgtatgctacttgtggtctatatgtcatctgctactac 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2535 tcttgtctcttgtctctgtttgtgtatgctacttgtggtctatatgtcatctgctactac 2594
Query: 2581 tgttaattaaccattaagcaatggatttgtctttattcttctttttaaaaattgtggata 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2595 tgttaattaaccattaagcaatggatttgtctttattcttctttttaaaaattgtggata 2654
Query: 2641 ttgattgatgagatcataaatagtttataatgataaaagatgaactgtac 2690
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2655 ttgattgatgagatcataaatagtttataatgataaaagatgaactgtac 2704
>At1g01060.2 68414.m00007 myb family transcription factor contains Pfam profile:
PF00249 myb-like DNA-binding domain; identical to cDNA
LATE ELONGATED HYPOCOTYL MYB transcription factor
GI:3281845
Length = 2814
Score = 4823 bits (2433), Expect = 0.0
Identities = 2433/2433 (100%)
Strand = Plus / Plus
Query: 258 ggttttggctgcggtggattcgtttggtttctctagaatctaaagaggttatcacaacgg 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ggttttggctgcggtggattcgtttggtttctctagaatctaaagaggttatcacaacgg 441
Query: 318 ctttgcaatttgaaaactttcatgtttggggagatcaaagatggtttcttttttatactt 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctttgcaatttgaaaactttcatgtttggggagatcaaagatggtttcttttttatactt 501
Query: 378 tacttgttagagaggatttgaagcagcgaatagctgcaccggtcctgttatggatactaa 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tacttgttagagaggatttgaagcagcgaatagctgcaccggtcctgttatggatactaa 561
Query: 438 tacatctggagaagaattattagctaaggcaagaaagccatatacaataacaaagcagcg 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tacatctggagaagaattattagctaaggcaagaaagccatatacaataacaaagcagcg 621
Query: 498 agagcgatggactgaggatgagcatgagaggtttctagaagccttgaggctttatggaag 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agagcgatggactgaggatgagcatgagaggtttctagaagccttgaggctttatggaag 681
Query: 558 agcttggcaacgaattgaagaacatattgggacaaagactgctgttcagatcagaagtca 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agcttggcaacgaattgaagaacatattgggacaaagactgctgttcagatcagaagtca 741
Query: 618 tgcacaaaagttcttcacaaagttggagaaagaggctgaagttaaaggcatccctgtttg 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tgcacaaaagttcttcacaaagttggagaaagaggctgaagttaaaggcatccctgtttg 801
Query: 678 ccaagctttggacatagaaattccgcctcctcgtcctaaacgaaaacccaatactcctta 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ccaagctttggacatagaaattccgcctcctcgtcctaaacgaaaacccaatactcctta 861
Query: 738 tcctcgaaagcctgggaacaacggtacatcttcctctcaagtatcatcagcaaaagatgc 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 tcctcgaaagcctgggaacaacggtacatcttcctctcaagtatcatcagcaaaagatgc 921
Query: 798 aaaacttgtttcatcggcctcttcttcacagttgaatcaggcgttcttggatttggaaaa 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 aaaacttgtttcatcggcctcttcttcacagttgaatcaggcgttcttggatttggaaaa 981
Query: 858 aatgccgttctctgagaaaacatcaactggaaaagaaaatcaagatgagaattgctcggg 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 aatgccgttctctgagaaaacatcaactggaaaagaaaatcaagatgagaattgctcggg 1041
Query: 918 tgtttctactgtgaacaagtatcccttaccaacgaaacaggtaagtggcgacattgaaac 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 tgtttctactgtgaacaagtatcccttaccaacgaaacaggtaagtggcgacattgaaac 1101
Query: 978 aagtaagacctcaactgtggacaacgcggttcaagatgttcccaagaagaacaaagacaa 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 aagtaagacctcaactgtggacaacgcggttcaagatgttcccaagaagaacaaagacaa 1161
Query: 1038 agatggtaacgatggtactactgtgcacagcatgcaaaactacccttggcatttccacgc 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 agatggtaacgatggtactactgtgcacagcatgcaaaactacccttggcatttccacgc 1221
Query: 1098 agatattgtgaacgggaatatagcaaaatgccctcaaaatcatccctcaggtatggtatc 1157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 agatattgtgaacgggaatatagcaaaatgccctcaaaatcatccctcaggtatggtatc 1281
Query: 1158 tcaagacttcatgtttcatcctatgagagaagaaactcacgggcacgcaaatcttcaagc 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 tcaagacttcatgtttcatcctatgagagaagaaactcacgggcacgcaaatcttcaagc 1341
Query: 1218 tacaacagcatctgctactactacagcttctcatcaagcgtttccagcttgtcattcaca 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 tacaacagcatctgctactactacagcttctcatcaagcgtttccagcttgtcattcaca 1401
Query: 1278 ggatgattaccgttcgtttctccagatatcatctactttctccaatcttattatgtcaac 1337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 ggatgattaccgttcgtttctccagatatcatctactttctccaatcttattatgtcaac 1461
Query: 1338 tctcctacagaatcctgcagctcatgctgcagctacattcgctgcttcggtctggcctta 1397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1462 tctcctacagaatcctgcagctcatgctgcagctacattcgctgcttcggtctggcctta 1521
Query: 1398 tgcgagtgtcgggaattctggtgattcatcaaccccaatgagctcttctcctccaagtat 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1522 tgcgagtgtcgggaattctggtgattcatcaaccccaatgagctcttctcctccaagtat 1581
Query: 1458 aactgccattgccgctgctacagtagctgctgcaactgcttggtgggcttctcatggact 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 aactgccattgccgctgctacagtagctgctgcaactgcttggtgggcttctcatggact 1641
Query: 1518 tcttcctgtatgcgctccagctccaataacatgtgttccattctcaactgttgcagttcc 1577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1642 tcttcctgtatgcgctccagctccaataacatgtgttccattctcaactgttgcagttcc 1701
Query: 1578 aactccagcaatgactgaaatggataccgttgaaaatactcaaccgtttgagaaacaaaa 1637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1702 aactccagcaatgactgaaatggataccgttgaaaatactcaaccgtttgagaaacaaaa 1761
Query: 1638 cacagctctgcaagatcaaaacttggcttcgaaatctccagcttcatcatctgatgattc 1697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1762 cacagctctgcaagatcaaaacttggcttcgaaatctccagcttcatcatctgatgattc 1821
Query: 1698 agatgagactggagtaaccaagctaaatgccgactcaaaaaccaatgatgataaaattga 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1822 agatgagactggagtaaccaagctaaatgccgactcaaaaaccaatgatgataaaattga 1881
Query: 1758 ggaggttgttgttactgccgctgtgcatgactcaaacactgcccagaagaaaaatcttgt 1817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1882 ggaggttgttgttactgccgctgtgcatgactcaaacactgcccagaagaaaaatcttgt 1941
Query: 1818 ggaccgctcatcctgtggctcaaatacaccttcagggagtgacgcagaaactgatgcatt 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1942 ggaccgctcatcctgtggctcaaatacaccttcagggagtgacgcagaaactgatgcatt 2001
Query: 1878 agataaaatggagaaagataaagaggatgtgaaggagacagatgagaatcagccagatgt 1937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2002 agataaaatggagaaagataaagaggatgtgaaggagacagatgagaatcagccagatgt 2061
Query: 1938 tattgagttaaataaccgtaagattaaaatgagagacaacaacagcaacaacaatgcaac 1997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2062 tattgagttaaataaccgtaagattaaaatgagagacaacaacagcaacaacaatgcaac 2121
Query: 1998 tactgattcgtggaaggaagtctccgaagagggtcgtatagcgtttcaggctctctttgc 2057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2122 tactgattcgtggaaggaagtctccgaagagggtcgtatagcgtttcaggctctctttgc 2181
Query: 2058 aagagaaagattgcctcaaagcttttcgcctcctcaagtggcagagaatgtgaatagaaa 2117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2182 aagagaaagattgcctcaaagcttttcgcctcctcaagtggcagagaatgtgaatagaaa 2241
Query: 2118 acaaagtgacacgtcaatgccattggctcctaatttcaaaagccaggattcttgtgctgc 2177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2242 acaaagtgacacgtcaatgccattggctcctaatttcaaaagccaggattcttgtgctgc 2301
Query: 2178 agaccaagaaggagtagtaatgatcggtgttggaacatgcaagagtcttaaaacgagaca 2237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2302 agaccaagaaggagtagtaatgatcggtgttggaacatgcaagagtcttaaaacgagaca 2361
Query: 2238 gacaggatttaagccatacaagagatgttcaatggaagtgaaagagagccaagttgggaa 2297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2362 gacaggatttaagccatacaagagatgttcaatggaagtgaaagagagccaagttgggaa 2421
Query: 2298 cataaacaatcaaagtgatgaaaaagtctgcaaaaggcttcgattggaaggagaagcttc 2357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2422 cataaacaatcaaagtgatgaaaaagtctgcaaaaggcttcgattggaaggagaagcttc 2481
Query: 2358 tacatgacagacttggaggtaaaaaaaaaacatccacatttttatcaatatctttaaatc 2417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2482 tacatgacagacttggaggtaaaaaaaaaacatccacatttttatcaatatctttaaatc 2541
Query: 2418 tagtgttagtagtttgcttctccaatctttatgaaagagacttttaattttccttccgaa 2477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2542 tagtgttagtagtttgcttctccaatctttatgaaagagacttttaattttccttccgaa 2601
Query: 2478 catttctttggtcatgtcaggttctgtaccatattaccccatgtcttgtctcttgtctct 2537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2602 catttctttggtcatgtcaggttctgtaccatattaccccatgtcttgtctcttgtctct 2661
Query: 2538 gtttgtgtatgctacttgtggtctatatgtcatctgctactactgttaattaaccattaa 2597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2662 gtttgtgtatgctacttgtggtctatatgtcatctgctactactgttaattaaccattaa 2721
Query: 2598 gcaatggatttgtctttattcttctttttaaaaattgtggatattgattgatgagatcat 2657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2722 gcaatggatttgtctttattcttctttttaaaaattgtggatattgattgatgagatcat 2781
Query: 2658 aaatagtttataatgataaaagatgaactgtac 2690
|||||||||||||||||||||||||||||||||
Sbjct: 2782 aaatagtttataatgataaaagatgaactgtac 2814
Score = 424 bits (214), Expect = e-117
Identities = 214/214 (100%)
Strand = Plus / Plus
Query: 47 cagtcttccttcttcttcttcttcttcttcttcttcttcttcttcagttatcttcttcct 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagtcttccttcttcttcttcttcttcttcttcttcttcttcttcagttatcttcttcct 60
Query: 107 tcttctctctgttttttaaatttatttttagagatttttttttgttttgcttccgatttg 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcttctctctgttttttaaatttatttttagagatttttttttgttttgcttccgatttg 120
Query: 167 attatttccgggaacgatgacttctccggggagttcccggtgagatgataagtcagattg 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attatttccgggaacgatgacttctccggggagttcccggtgagatgataagtcagattg 180
Query: 227 catacttgtctcctccatggctactctcaagggt 260
||||||||||||||||||||||||||||||||||
Sbjct: 181 catacttgtctcctccatggctactctcaagggt 214
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1) identical to
myb-related transcription factor (CCA1) GI:4090569 from
[Arabidopsis thaliana]
Length = 2256
Score = 83.8 bits (42), Expect = 7e-15
Identities = 156/194 (80%)
Strand = Plus / Plus
Query: 472 aagccatatacaataacaaagcagcgagagcgatggactgaggatgagcatgagaggttt 531
||||||||||| ||||||||||| || || | ||||||||||| || ||| | || ||
Sbjct: 283 aagccatatacgataacaaagcaacgtgaaaggtggactgaggaagaacataatagattc 342
Query: 532 ctagaagccttgaggctttatggaagagcttggcaacgaattgaagaacatattgggaca 591
| ||||| |||||||||||||| ||||| ||||| |||||||||||| | | |||
Sbjct: 343 attgaagctttgaggctttatggtagagcatggcagaagattgaagaacatgtagcaaca 402
Query: 592 aagactgctgttcagatcagaagtcatgcacaaaagttcttcacaaagttggagaaagag 651
|| |||||||| ||||| |||||||| || || || || ||| | ||| | |||||||||
Sbjct: 403 aaaactgctgtccagataagaagtcacgctcagaaatttttctccaaggtagagaaagag 462
Query: 652 gctgaagttaaagg 665
||||||| ||||||
Sbjct: 463 gctgaagctaaagg 476
Score = 40.1 bits (20), Expect = 0.096
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 cttcttcttcttcttcttct 77
||||||||||||||||||||
Sbjct: 66 cttcttcttcttcttcttct 85
Score = 40.1 bits (20), Expect = 0.096
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 cttcttcttcttcttcttct 83
||||||||||||||||||||
Sbjct: 66 cttcttcttcttcttcttct 85
Score = 40.1 bits (20), Expect = 0.096
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 61 cttcttcttcttcttcttct 80
||||||||||||||||||||
Sbjct: 66 cttcttcttcttcttcttct 85
Score = 40.1 bits (20), Expect = 0.096
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 cttcttcttcttcttcttct 86
||||||||||||||||||||
Sbjct: 66 cttcttcttcttcttcttct 85
Score = 40.1 bits (20), Expect = 0.096
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 cttcttcttcttcttcttct 89
||||||||||||||||||||
Sbjct: 66 cttcttcttcttcttcttct 85
Score = 40.1 bits (20), Expect = 0.096
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 55 cttcttcttcttcttcttct 74
||||||||||||||||||||
Sbjct: 66 cttcttcttcttcttcttct 85
Score = 38.2 bits (19), Expect = 0.38
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 73 cttcttcttcttcttcttc 91
|||||||||||||||||||
Sbjct: 66 cttcttcttcttcttcttc 84
>At3g55470.1 68416.m06160 C2 domain-containing protein similar to phloem
protein GI:4164539 from [Cucurbita maxima]
Length = 1178
Score = 77.8 bits (39), Expect = 4e-13
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 53 tccttcttcttcttcttcttcttcttcttcttcttcttc 91
|||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tccttcttcttcttcttcttcttcttcttcttcttcttc 49
Score = 73.8 bits (37), Expect = 7e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 55 cttcttcttcttcttcttcttcttcttcttcttcttc 91
|||||||||||||||||||||||||||||||||||||
Sbjct: 19 cttcttcttcttcttcttcttcttcttcttcttcttc 55
Score = 73.8 bits (37), Expect = 7e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 55 cttcttcttcttcttcttcttcttcttcttcttcttc 91
|||||||||||||||||||||||||||||||||||||
Sbjct: 22 cttcttcttcttcttcttcttcttcttcttcttcttc 58
Score = 73.8 bits (37), Expect = 7e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 55 cttcttcttcttcttcttcttcttcttcttcttcttc 91
|||||||||||||||||||||||||||||||||||||
Sbjct: 16 cttcttcttcttcttcttcttcttcttcttcttcttc 52
Score = 71.9 bits (36), Expect = 3e-11
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 55 cttcttcttcttcttcttcttcttcttcttcttctt 90
||||||||||||||||||||||||||||||||||||
Sbjct: 25 cttcttcttcttcttcttcttcttcttcttcttctt 60
Score = 63.9 bits (32), Expect = 7e-09
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 56 ttcttcttcttcttcttcttcttcttcttcttcttc 91
|||| |||||||||||||||||||||||||||||||
Sbjct: 8 ttctccttcttcttcttcttcttcttcttcttcttc 43
Score = 63.9 bits (32), Expect = 7e-09
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 55 cttcttcttcttcttcttcttcttcttcttcttctt 90
|||||||||||||||||||||||||||||| |||||
Sbjct: 31 cttcttcttcttcttcttcttcttcttctttttctt 66
>At1g71270.1 68414.m08225 Vps52/Sac2 family protein similar to SP|P39904 SAC2
protein {Saccharomyces cerevisiae}; contains Pfam
profile PF04129: Vps52 / Sac2 family
Length = 2463
Score = 77.8 bits (39), Expect = 4e-13
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 55 cttcttcttcttcttcttcttcttcttcttcttcttcag 93
|||||||||||||||||||||||||||||||||||||||
Sbjct: 43 cttcttcttcttcttcttcttcttcttcttcttcttcag 5
Score = 73.8 bits (37), Expect = 7e-12
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 55 cttcttcttcttcttcttcttcttcttcttcttcttc 91
|||||||||||||||||||||||||||||||||||||
Sbjct: 46 cttcttcttcttcttcttcttcttcttcttcttcttc 10
Score = 73.8 bits (37), Expect = 7e-12
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 55 cttcttcttcttcttcttcttcttcttcttcttcttc 91
|||||||||||||||||||||||||||||||||||||
Sbjct: 52 cttcttcttcttcttcttcttcttcttcttcttcttc 16
Score = 73.8 bits (37), Expect = 7e-12
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 55 cttcttcttcttcttcttcttcttcttcttcttcttc 91
|||||||||||||||||||||||||||||||||||||
Sbjct: 49 cttcttcttcttcttcttcttcttcttcttcttcttc 13
Score = 69.9 bits (35), Expect = 1e-10
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 57 tcttcttcttcttcttcttcttcttcttcttcttc 91
|||||||||||||||||||||||||||||||||||
Sbjct: 53 tcttcttcttcttcttcttcttcttcttcttcttc 19
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 205,550
Number of Sequences: 29161
Number of extensions: 205550
Number of successful extensions: 34534
Number of sequences better than 10.0: 1699
length of query: 2691
length of database: 44,058,232
effective HSP length: 19
effective length of query: 2672
effective length of database: 43,504,173
effective search space: 116243150256
effective search space used: 116243150256
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)