BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.2.C1
(960 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01050.1 68414.m00005 inorganic pyrophosphatase, putativ... 1897 0.0
At4g01480.1 68417.m00191 inorganic pyrophosphatase, putativ... 585 e-166
At2g46860.1 68415.m05847 inorganic pyrophosphatase, putativ... 293 1e-78
At3g53620.1 68416.m05923 inorganic pyrophosphatase, putativ... 165 9e-40
At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble... 165 9e-40
>At1g01050.1 68414.m00005 inorganic pyrophosphatase, putative [soluble] /
pyrophosphate phospho-hydrolase, putative / PPase,
putative strong similarity to SP|Q43187 Soluble
inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate
phospho- hydrolase) (PPase) {Solanum tuberosum};
contains Pfam profile PF00719: inorganic pyrophosphatase
Length = 960
Score = 1897 bits (957), Expect = 0.0
Identities = 957/957 (100%)
Strand = Plus / Plus
Query: 1 atatatacattttacaatcacttgctagaccaacgggcttcacttgtttctctcccaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atatatacattttacaatcacttgctagaccaacgggcttcacttgtttctctcccaaag 60
Query: 61 tttcttcatcatccttgcgataaagaaaacaacaatcggctgtttcgtttcgatccaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttcttcatcatccttgcgataaagaaaacaacaatcggctgtttcgtttcgatccaaag 120
Query: 121 atgagtgaagaaactaaagataaccagaggctgcagcgaccagctcctcgtcttaacgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgagtgaagaaactaaagataaccagaggctgcagcgaccagctcctcgtcttaacgag 180
Query: 181 aggattctctcatccttgtcaagaagatccgtagctgctcatccatggcatgatcttgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggattctctcatccttgtcaagaagatccgtagctgctcatccatggcatgatcttgag 240
Query: 241 attggacctggagctccacagattttcaatgtggttgttgagatcactaaaggaagcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attggacctggagctccacagattttcaatgtggttgttgagatcactaaaggaagcaag 300
Query: 301 gtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctctactca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctctactca 360
Query: 361 tcagttgtgtaccctcacaactatggttttgttcctcgcacattgtgtgaagacaatgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcagttgtgtaccctcacaactatggttttgttcctcgcacattgtgtgaagacaatgac 420
Query: 421 cccattgatgtcttagtcatcatgcaggaacctgtgcttccgggttgttttctgcgtgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cccattgatgtcttagtcatcatgcaggaacctgtgcttccgggttgttttctgcgtgcc 480
Query: 481 agagccattggattaatgcctatgattgaccagggtgaaaaagatgacaagatcattgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agagccattggattaatgcctatgattgaccagggtgaaaaagatgacaagatcattgca 540
Query: 541 gtgtgtgttgatgatcctgaatataagcactacactgacatcaaagaacttcctcctcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgtgtgttgatgatcctgaatataagcactacactgacatcaaagaacttcctcctcac 600
Query: 601 cgtctctctgaaatccgtcgtttcttcgaagactacaagaaaaacgagaacaaggaagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cgtctctctgaaatccgtcgtttcttcgaagactacaagaaaaacgagaacaaggaagtt 660
Query: 661 gcagtgaatgattttctgccatctgagtctgcggttgaagctatccagtactcaatggac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gcagtgaatgattttctgccatctgagtctgcggttgaagctatccagtactcaatggac 720
Query: 721 ctctatgctgaatacattctccacaccctgaggcgttgaagcttctcctcagaagatttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctctatgctgaatacattctccacaccctgaggcgttgaagcttctcctcagaagatttc 780
Query: 781 tgcagcatctatgtttctgttacttttcattgataataagaagcatatgatcctaattga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgcagcatctatgtttctgttacttttcattgataataagaagcatatgatcctaattga 840
Query: 841 tattacttttatctctgcatttttcttccttatcatttggtccttctgtaatttcgtttt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tattacttttatctctgcatttttcttccttatcatttggtccttctgtaatttcgtttt 900
Query: 901 aaagaccctttcttggcattgaaatttttggtttaatttgtttgaagagttctataa 957
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aaagaccctttcttggcattgaaatttttggtttaatttgtttgaagagttctataa 957
>At4g01480.1 68417.m00191 inorganic pyrophosphatase, putative [soluble] /
pyrophosphate phospho-hydrolase, putative / PPase,
putative strong similarity to SP|Q43187 Soluble
inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate
phospho- hydrolase) (PPase) {Solanum tuberosum};
contains Pfam profile PF00719: inorganic pyrophosphatase
Length = 1014
Score = 585 bits (295), Expect = e-166
Identities = 508/579 (87%)
Strand = Plus / Plus
Query: 175 aacgagaggattctctcatccttgtcaagaagatccgtagctgctcatccatggcatgat 234
|||||||||||||||||||| ||||| | ||||| || ||||| |||||||||||||||
Sbjct: 152 aacgagaggattctctcatctttgtctaagagatcggttgctgcacatccatggcatgat 211
Query: 235 cttgagattggacctggagctccacagattttcaatgtggttgttgagatcactaaagga 294
||||| || ||||||||||||||| |||||||||||||||| |||||||| | || ||
Sbjct: 212 cttgaaatcggacctggagctccagtgattttcaatgtggttattgagatctcaaagggg 271
Query: 295 agcaaggtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctc 354
||||| |||||||| || ||||||||||| ||||| ||||||||||||||| | |||||
Sbjct: 272 agcaaagtcaaatatgaacttgacaaaaaaacaggtctcatcaaggttgataggattctt 331
Query: 355 tactcatcagttgtgtaccctcacaactatggttttgttcctcgcacattgtgtgaagac 414
|| || || |||||||| ||||||||||| || ||||| || |||||| | |||||||||
Sbjct: 332 tattcttcggttgtgtatcctcacaactacgggtttgtcccacgcacactatgtgaagac 391
Query: 415 aatgaccccattgatgtcttagtcatcatgcaggaacctgtgcttccgggttgttttctg 474
|||||||| || ||||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 392 aatgaccctatagatgttttagttatcatgcaggagcctgtgcttccgggttgttttctt 451
Query: 475 cgtgccagagccattggattaatgcctatgattgaccagggtgaaaaagatgacaagatc 534
|| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cgcgcccgagctattggtttaatgcctatgattgaccagggtgaaaaagatgacaagatc 511
Query: 535 attgcagtgtgtgttgatgatcctgaatataagcactacactgacatcaaagaacttcct 594
|||||||| ||||||||||||||||| ||||||||| |||| ||||||| |||||||||
Sbjct: 512 attgcagtttgtgttgatgatcctgagtataagcacatcactaacatcaatgaacttcct 571
Query: 595 cctcaccgtctctctgaaatccgtcgtttcttcgaagactacaagaaaaacgagaacaag 654
||||| ||||| |||||||||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 572 cctcatcgtctttctgaaatccgtcgattctttgaagactacaagaagaatgagaacaag 631
Query: 655 gaagttgcagtgaatgattttctgccatctgagtctgcggttgaagctatccagtactca 714
||||||||||||||||||||||| | | ||| |||| ||||||| || |||||||||
Sbjct: 632 gaagttgcagtgaatgattttctacaacctggtcctgctattgaagccattcagtactca 691
Query: 715 atggacctctatgctgaatacattctccacaccctgagg 753
||||| || || ||||| |||||||| ||||||||||||
Sbjct: 692 atggatctttacgctgagtacattcttcacaccctgagg 730
>At2g46860.1 68415.m05847 inorganic pyrophosphatase, putative [soluble] /
pyrophosphate phospho-hydrolase, putative / PPase,
putative strong similarity to SP|Q43187 Soluble
inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate
phospho- hydrolase) (PPase) {Solanum tuberosum};
contains Pfam profile PF00719: inorganic pyrophosphatase
Length = 908
Score = 293 bits (148), Expect = 1e-78
Identities = 466/572 (81%)
Strand = Plus / Plus
Query: 175 aacgagaggattctctcatccttgtcaagaagatccgtagctgctcatccatggcatgat 234
|||||||||||||||||| | | || || ||||| |||||||| ||||||||||| ||
Sbjct: 109 aacgagaggattctctcaacactatccaggagatctgtagctgcacatccatggcacgac 168
Query: 235 cttgagattggacctggagctccacagattttcaatgtggttgttgagatcactaaagga 294
||||||||||| |||| ||||||| | | ||||||||||| ||||||||||| || |||
Sbjct: 169 cttgagattggtcctgaagctccattggtcttcaatgtggtggttgagatcacaaaggga 228
Query: 295 agcaaggtcaaatacgagcttgacaaaaagacaggactcatcaaggttgatcgtattctc 354
||||| || ||||| || || ||||||||||| || || ||||||||||| || || |
Sbjct: 229 agcaaagtgaaatatgaactcgacaaaaagaccggtcttatcaaggttgaccggatcttg 288
Query: 355 tactcatcagttgtgtaccctcacaactatggttttgttcctcgcacattgtgtgaagac 414
||||| || ||||| || || ||||| || || || | || || |||||||||||||||
Sbjct: 289 tactcctccgttgtttatccacacaattacggattcatcccacggacattgtgtgaagac 348
Query: 415 aatgaccccattgatgtcttagtcatcatgcaggaacctgtgcttccgggttgttttctg 474
|| || || |||||||| | ||| | ||||||||||| |||||||| || ||||| ||
Sbjct: 349 aacgatcctcttgatgtccttgtccttatgcaggaaccagtgcttcccggatgtttcctc 408
Query: 475 cgtgccagagccattggattaatgcctatgattgaccagggtgaaaaagatgacaagatc 534
||||| |||||||||||||||||||| |||||||| ||||| || ||||| ||||| |||
Sbjct: 409 cgtgctagagccattggattaatgcccatgattgatcagggagagaaagacgacaaaatc 468
Query: 535 attgcagtgtgtgttgatgatcctgaatataagcactacactgacatcaaagaacttcct 594
|| || || |||| ||||||||| || || || || | ||| ||||||||| |||| ||
Sbjct: 469 atagccgtatgtgctgatgatccagagtacaaacatttcacagacatcaaacaactcgct 528
Query: 595 cctcaccgtctctctgaaatccgtcgtttcttcgaagactacaagaaaaacgagaacaag 654
||||| |||||| |||||||| ||||||||||||||||| ||||| ||||||||||||
Sbjct: 529 cctcatcgtctccaagaaatccgccgtttcttcgaagactataagaagaacgagaacaag 588
Query: 655 gaagttgcagtgaatgattttctgccatctgagtctgcggttgaagctatccagtactca 714
|||| || || || ||||| ||||||| ||| ||| ||||||||| ||||||||
Sbjct: 589 aaagtggctgtcaacgatttcttgccatcagagagtgcacatgaagctattcagtactcc 648
Query: 715 atggacctctatgctgaatacattctccacac 746
||||| || || ||||| || |||||||||||
Sbjct: 649 atggatctatacgctgagtatattctccacac 680
Score = 42.1 bits (21), Expect = 0.009
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 112 gatccaaagatgagtgaagaa 132
|||||||||||||||||||||
Sbjct: 34 gatccaaagatgagtgaagaa 54
>At3g53620.1 68416.m05923 inorganic pyrophosphatase, putative [soluble] /
pyrophosphate phospho-hydrolase, putative / PPase,
putative similar to magnesium dependent soluble
inorganic pyrophosphatase [Solanum tuberosum]
GI:2706450; contains Pfam profile PF00719: inorganic
pyrophosphatase
Length = 1294
Score = 165 bits (83), Expect = 9e-40
Identities = 362/455 (79%)
Strand = Plus / Plus
Query: 205 agatccgtagctgctcatccatggcatgatcttgagattggacctggagctccacagatt 264
||||| |||||||| || |||||||||||||| ||||| ||||||| ||| ||| ||
Sbjct: 378 agatcagtagctgcacacccatggcatgatctcgagataggacctgaagccccaattatc 437
Query: 265 ttcaatgtggttgttgagatcactaaaggaagcaaggtcaaatacgagcttgacaaaaag 324
|||||| || |||||||| ||||| |||||||| ||||| || || |||||||
Sbjct: 438 ttcaattgtgtggttgagataggaaaagggagcaaggtgaaatatgaactcgacaaaact 497
Query: 325 acaggactcatcaaggttgatcgtattctctactcatcagttgtgtaccctcacaactat 384
|| || ||||| ||||| || |||||||| |||||||| || || ||||| |||||||||
Sbjct: 498 acgggtctcattaaggtcgaccgtattctttactcatctgtcgtatacccacacaactat 557
Query: 385 ggttttgttcctcgcacattgtgtgaagacaatgaccccattgatgtcttagtcatcatg 444
|| || |||| || || | ||||| |||| |||||| |||||||| | ||||| |||
Sbjct: 558 gggttcattccgcgtaccctttgtgaggacagtgaccctattgatgttcttgtcattatg 617
Query: 445 caggaacctgtgcttccgggttgttttctgcgtgccagagccattggattaatgcctatg 504
|||||||| ||| | || || || ||||| || |||| ||| ||||| | ||||| |||
Sbjct: 618 caggaaccggtgatcccaggatgctttcttcgggccaaagctattggtctgatgccaatg 677
Query: 505 attgaccagggtgaaaaagatgacaagatcattgcagtgtgtgttgatgatcctgaatat 564
||||| |||||||| ||||| |||||||||||||| || || | ||| ||||| || |||
Sbjct: 678 attgatcagggtgagaaagacgacaagatcattgctgtctgcgctgacgatccagagtat 737
Query: 565 aagcactacactgacatcaaagaacttcctcctcaccgtctctctgaaatccgtcgtttc 624
|| |||| ||||||| || ||||| ||||| ||| | |||| ||||| ||||||
Sbjct: 738 cgccattacaacgacatcagtgagcttccgcctcatcgtatggctgagatccgccgtttc 797
Query: 625 ttcgaagactacaagaaaaacgagaacaaggaagt 659
|| |||||||| |||||||||||||||||||||||
Sbjct: 798 tttgaagactataagaaaaacgagaacaaggaagt 832
>At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PPA) /
pyrophosphate phospho-hydrolase / PPase nearly identical
to SP|P21216 Soluble inorganic pyrophosphatase (EC
3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase)
{Arabidopsis thaliana}
Length = 1000
Score = 165 bits (83), Expect = 9e-40
Identities = 263/323 (81%)
Strand = Plus / Plus
Query: 337 aaggttgatcgtattctctactcatcagttgtgtaccctcacaactatggttttgttcct 396
||||||||||| ||||||||||||| |||||||||| |||||||| ||||| | |||
Sbjct: 366 aaggttgatcgcgttctctactcatccattgtgtacccccacaactacggtttcatccct 425
Query: 397 cgcacattgtgtgaagacaatgaccccattgatgtcttagtcatcatgcaggaacctgtg 456
|| || | |||||||||| ||| || || |||||| | || | |||||||| ||||||
Sbjct: 426 cgaactatctgtgaagacagtgatccaatggatgtcctggtactgatgcaggagcctgtg 485
Query: 457 cttccgggttgttttctgcgtgccagagccattggattaatgcctatgattgaccagggt 516
|| | || | || || |||||| | || ||||| ||||||| |||||||| ||||||
Sbjct: 486 ctaaccggatcattcctccgtgcccgtgctattggtctaatgcccatgattgatcagggt 545
Query: 517 gaaaaagatgacaagatcattgcagtgtgtgttgatgatcctgaatataagcactacact 576
|| ||||| ||||||||||||||||| |||| ||||||||| || | |||||||
Sbjct: 546 gagaaagacgacaagatcattgcagtatgtgctgatgatcccgagttccgtcactacaga 605
Query: 577 gacatcaaagaacttcctcctcaccgtctctctgaaatccgtcgtttcttcgaagactac 636
||||||||||| ||||| ||||||||||| ||||||||||||| ||||| || ||||||
Sbjct: 606 gacatcaaagagcttccccctcaccgtctagctgaaatccgtcgcttctttgaggactac 665
Query: 637 aagaaaaacgagaacaaggaagt 659
||||| |||||||||||| ||||
Sbjct: 666 aagaagaacgagaacaagaaagt 688
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 36,724
Number of Sequences: 29161
Number of extensions: 36724
Number of successful extensions: 900
Number of sequences better than 10.0: 64
length of query: 960
length of database: 44,058,232
effective HSP length: 18
effective length of query: 942
effective length of database: 43,533,334
effective search space: 41008400628
effective search space used: 41008400628
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)