BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.sd.14.C1
(1752 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g01190.1 68414.m00032 cytochrome P450, putative similar ... 3029 0.0
At3g61880.1 68416.m06950 cytochrome P450, putative similar ... 70 7e-11
At2g46660.1 68415.m05822 cytochrome P450, putative similar ... 62 2e-08
At1g13710.1 68414.m01611 cytochrome P450 family protein sim... 62 2e-08
At5g09970.1 68418.m01152 cytochrome P450 family protein 48 3e-04
>At1g01190.1 68414.m00032 cytochrome P450, putative similar to cytochrome P450
SP:O48927 from [Glycine max]
Length = 1608
Score = 3029 bits (1528), Expect = 0.0
Identities = 1588/1608 (98%)
Strand = Plus / Plus
Query: 1 atgagaaccgaaatagaaagtttgtgggtatttgctcttgcatcaaaattcaatatttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgagaaccgaaatagaaagtttgtgggtatttgctcttgcatcaaaattcaatatttac 60
Query: 61 atgcaacaacattttgcttcccttctcgtcgccattgctatcacttggtttaccataacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgcaacaacattttgcttcccttctcgtcgccattgctatcacttggtttaccataacc 120
Query: 121 atcgtattttggtctactccgggtggaccggcttggggaaaatacttcttcactcgccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcgtattttggtctactccgggtggaccggcttggggaaaatacttcttcactcgccgg 180
Query: 181 tttatttctctcgattacaaccgaaaatacaagaatctcattcccggtcctagagggttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttatttctctcgattacaaccgaaaatacaagaatctcattcccggtcctagagggttt 240
Query: 241 ccacttgtgggaagcatgagccttaggtcaagccacgtggctcatcagcgcatagcgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccacttgtgggaagcatgagccttaggtcaagccacgtggctcatcagcgcatagcgtct 300
Query: 301 gtggctgagatgagtaacgccaagcggctcatggcgtttagcctcggtgatactaaggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggctgagatgagtaacgccaagcggctcatggcgtttagcctcggtgatactaaggtg 360
Query: 361 gtggtgacgtgtcatcctgccgtggcaaaggagatactaaacagttcggtttttgctgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtggtgacgtgtcatcctgccgtggcaaaggagatactaaacagttcggtttttgctgac 420
Query: 421 cgaccggttgacgaaaccgcttacggtttgatgtttaaccgagccatgggatttgctccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cgaccggttgacgaaaccgcttacggtttgatgtttaaccgagccatgggatttgctccc 480
Query: 481 aatggtacttattggcgtacgctgcgtcggttaggctcgaaccatctttttaacccgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatggtacttattggcgtacgctgcgtcggttaggctcgaaccatctttttaacccgaag 540
Query: 541 caaatcaaacaatcggaggatcagagacgggtgatagcgactcagatggtgaatgcgttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caaatcaaacaatcggaggatcagagacgggtgatagcgactcagatggtgaatgcgttt 600
Query: 601 gcacgtaaccctaaatccgcgtgtgcagtgcgtgatttgctcaaaacagcgtcgttgtgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcacgtaaccctaaatccgcgtgtgcagtgcgtgatttgctcaaaacagcgtcgttgtgt 660
Query: 661 aacatgatgggtttggttttcgggagagagtatgaattggagtcaaataacaacttggaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aacatgatgggtttggttttcgggagagagtatgaattggagtcaaataacaacttggaa 720
Query: 721 tctgaatgcttaaagggtttggttgaagaagggtacgatcttctaggtacgttaaattgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tctgaatgcttaaagggtttggttgaagaagggtacgatcttctaggtacgttaaattgg 780
Query: 781 accgaccatcttccttggttagccggtttagatttccaacaaatccggtttaggtgctcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 accgaccatcttccttggttagccggtttagatttccaacaaatccggtttaggtgctcg 840
Query: 841 cagctcgtaccgaaagtaaatctgttattgagccgtatcatacatgaacaacgtgctgcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cagctcgtaccgaaagtaaatctgttattgagccgtatcatacatgaacaacgtgctgcc 900
Query: 901 acgggtaactttcttgacatgttactttctcttcaaggttcagaaaaattatcagaatcc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 acgggtaactttcttgacatgttactttctcttcaaggttcagaaaaattatcagaatcc 960
Query: 961 gacatggttgctgttctttgggaaatgatatttaggggaacggacactgttgcggttttg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gacatggttgctgttctttgggaaatgatatttaggggaacggacactgttgcggttttg 1020
Query: 1021 gtcgagtgggtgctagcgaggattgtgatgcatcccaaagttcaattaacggtccacgat 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gtcgagtgggtgctagcgaggattgtgatgcatcccaaagttcaattaacggtccacgat 1080
Query: 1081 gagcttgaccgagtcgttggcagatcaagaaccgtggatgagtcagaccttccatcactc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gagcttgaccgagtcgttggcagatcaagaaccgtggatgagtcagaccttccatcactc 1140
Query: 1141 acgtatctaacggctatgatcaaagaagtgttgaggctgcatccaccaggtccactgctt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 acgtatctaacggctatgatcaaagaagtgttgaggctgcatccaccaggtccactgctt 1200
Query: 1201 tcttgggcacgactgtctataacagacacttccgtagatggatatcacgtgccggctggg 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tcttgggcacgactgtctataacagacacttccgtagatggatatcacgtgccggctggg 1260
Query: 1261 accaccgcgatggtcaacatgtgggctatagcacgtgacccacacgtgtgggaggaaaat 1320
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1261 accaccgcgatggtcaacatgtgggctatagcacgtgacccacacgtgtgggaggatcct 1320
Query: 1321 ttagagattaagaatgagaggttcgtggctaaagagggtgaagatgagttctctgttatc 1380
|||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 1321 ttagagtttaagcctgagaggttcgtggctaaagagggtgaagctgagttctctgttttc 1380
Query: 1381 gggtcggatctgaggttggaaccgttcgggtagggtaagagggtttgaactggaaagaaa 1440
||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1381 gggtcggatctgaggttggcaccgttcgggtcgggtaagagggtttgccctggaaagaat 1440
Query: 1441 atgggactaacaacggtgtcgtcttgggtcgcaacgctctcgcatgagtctgagtggctc 1500
||||||| ||||||||||||| |||||| |||||||||| |||||||| |||||||||
Sbjct: 1441 ttgggacttacaacggtgtcgttttgggttgcaacgctcttgcatgagtttgagtggctt 1500
Query: 1501 cctagcgtcgaagctaaccctccagatctctcggaggttttgaggctctcgtgtgagatg 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 cctagcgtcgaagctaaccctccagatctctcggaggttttgaggctctcgtgtgagatg 1560
Query: 1561 gcttgtccactcatcgttaacgtaagctcaaggcgtaagataatgtaa 1608
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 gcttgtccactcatcgttaacgtaagctcaaggcgtaagataatgtaa 1608
>At3g61880.1 68416.m06950 cytochrome P450, putative similar to cytochrome p450
SP:O48927 from [Arabidopsis thaliana]
Length = 1919
Score = 69.9 bits (35), Expect = 7e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 1252 ccggctgggaccaccgcgatggtcaacatgtgggctatagcacgtgacccacacgtgtgg 1311
||||| ||||||||||| ||||| |||||||||||||| |||| || ||||||||||||
Sbjct: 1314 ccggcggggaccaccgcaatggtgaacatgtgggctattgcacacgatccacacgtgtgg 1373
Query: 1312 gag 1314
|||
Sbjct: 1374 gag 1376
Score = 50.1 bits (25), Expect = 6e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 973 gttctttgggaaatgatatttaggggaacggacactgttgcggttttggtcgagtgg 1029
||||| |||||||||||||| || ||||| ||||| || || |||||| ||||||||
Sbjct: 1035 gttctatgggaaatgatattcagaggaactgacacggtggctgttttgatcgagtgg 1091
Score = 46.1 bits (23), Expect = 0.001
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1541 tgaggctctcgtgtgagatggct 1563
|||||||||||||||||||||||
Sbjct: 1603 tgaggctctcgtgtgagatggct 1625
Score = 42.1 bits (21), Expect = 0.016
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 1144 tatctaacggctatgatcaaagaagtgttgaggctgcatccaccaggtccact 1196
|||||||||||| || | |||||||| |||||||| || || ||||| |||||
Sbjct: 1206 tatctaacggctgtggtgaaagaagtcttgaggcttcacccgccaggcccact 1258
>At2g46660.1 68415.m05822 cytochrome P450, putative similar to cytochrome p450
(CYP78A9)(GI:17065344) {Arabidopsis thaliana}
Length = 1867
Score = 61.9 bits (31), Expect = 2e-08
Identities = 196/251 (78%)
Strand = Plus / Plus
Query: 1144 tatctaacggctatgatcaaagaagtgttgaggctgcatccaccaggtccactgctttct 1203
|||||||||||| || | |||||||| |||||||| ||||| ||||| ||||| || ||
Sbjct: 1138 tatctaacggctgtggtgaaagaagtattgaggcttcatcctccaggcccacttctatca 1197
Query: 1204 tgggcacgactgtctataacagacacttccgtagatggatatcacgtgccggctgggacc 1263
||||| || || | ||||||||||| ||| ||||| || || ||||| ||||||
Sbjct: 1198 tgggcccgtttggccataacagacacgatcgttgatggtcgtcttgttccggcagggacc 1257
Query: 1264 accgcgatggtcaacatgtgggctatagcacgtgacccacacgtgtgggaggaaaattta 1323
|| || ||||| ||||||||||| || | | ||| ||||||||||||| || |||
Sbjct: 1258 acagcaatggtgaacatgtgggccgtatcgcatgatccacacgtgtgggttgatcctttg 1317
Query: 1324 gagattaagaatgagaggttcgtggctaaagagggtgaagatgagttctctgttatcggg 1383
||| |||| ||||||||||||||| ||||| ||||| | ||||| || ||| | |||
Sbjct: 1318 gagtttaaacctgagaggttcgtggcaaaagaaggtgaggtggagttttcggttcttggg 1377
Query: 1384 tcggatctgag 1394
|||||| ||||
Sbjct: 1378 tcggatttgag 1388
Score = 50.1 bits (25), Expect = 6e-05
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 973 gttctttgggaaatgatatttaggggaacggacactgttgcggttttggtcgagtgg 1029
||||||||||| |||||||| || ||||| ||||| |||||||| || ||||||||
Sbjct: 967 gttctttgggagatgatattcagaggaacagacacagttgcggtcttaatcgagtgg 1023
Score = 38.2 bits (19), Expect = 0.25
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 407 cggtttttgctgaccgaccggtt 429
||||||||||||| |||||||||
Sbjct: 398 cggtttttgctgatcgaccggtt 420
>At1g13710.1 68414.m01611 cytochrome P450 family protein similar to cytochrome
P450 78A1 (SP:P48420) GI:349717 from [Zea mays]
Length = 1826
Score = 61.9 bits (31), Expect = 2e-08
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 961 gacatggttgctgttctttgggaaatgatatttag 995
|||||| ||||||||||||||||||||||||||||
Sbjct: 984 gacatgattgctgttctttgggaaatgatatttag 1018
>At5g09970.1 68418.m01152 cytochrome P450 family protein
Length = 2159
Score = 48.1 bits (24), Expect = 3e-04
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1267 gcgatggtcaacatgtgggctata 1290
||||||||||||||||||||||||
Sbjct: 1587 gcgatggtcaacatgtgggctata 1610
Score = 38.2 bits (19), Expect = 0.25
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1174 aggctgcatccaccaggtccactgctttcttgggc 1208
||||||||||| || || ||||||||||| |||||
Sbjct: 1491 aggctgcatcctcctggaccactgctttcatgggc 1525
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 50,701
Number of Sequences: 29161
Number of extensions: 50701
Number of successful extensions: 1172
Number of sequences better than 10.0: 34
length of query: 1752
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1734
effective length of database: 43,533,334
effective search space: 75486801156
effective search space used: 75486801156
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)