BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.9.cl.979.Contig1
(2215 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2... 3939 0.0
At3g06720.2 68416.m00797 importin alpha-1 subunit, putative... 228 2e-58
At3g06720.1 68416.m00796 importin alpha-1 subunit, putative... 228 2e-58
At5g49310.1 68418.m06102 importin alpha-1 subunit, putative... 94 6e-18
At4g02150.1 68417.m00287 importin alpha-2 subunit identical... 68 3e-10
>At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2) similar to importin
alpha 2 [Capsicum annuum] GI:13752562; contains Pfam
profiles PF01749: Importin beta binding domain, PF00514:
Armadillo/beta-catenin-like repeat; non-consensus GG
donor splice site at exon 1 and 6; CT acceptor splice
site at exon 2
Length = 2013
Score = 3939 bits (1987), Expect = 0.0
Identities = 2011/2015 (99%), Gaps = 3/2015 (0%)
Strand = Plus / Plus
Query: 151 gtctccactctcgttggctcatttttcattcaccgccacgaagcaagaggagattcgtat 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtctccactctcgttggctcatttttcattcaccgccacgaagcaagaggagattcgtat 60
Query: 211 tagccaccatgtctttgagacctaacgctaagactgaggttcgccggaaccgctacaaag 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagccaccatgtctttgagacctaacgctaagactgaggttcgccggaaccgctacaaag 120
Query: 271 tggcggtggatgctgaggaaggaagacggaggagagaggacaacatggtcgagatccgta 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggcggtggatgctgaggaaggaagacggaggagagaggacaacatggtcgagatccgta 180
Query: 331 agagtaagcgtgaagaaagcttacagaagaagcgtcgtgaaggccttcaagctaatcagc 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagtaagcgtgaagaaagcttacagaagaagcgtcgtgaaggccttcaagctaatcagc 240
Query: 391 tacctcaattcgctccttcttctgttcctgcttcatcaactgttg-agaagaagttggag 449
||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||
Sbjct: 241 tacctcaattcgctcct-ctcctgttcctgcttcatcaactgttggagaagaagttggag 299
Query: 450 agtttgcctgctatggttggtggtgtttggtcagatgatagaagtttacagcttgaagcg 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agtttgcctgctatggttggtggtgtttggtcagatgatagaagtttacagcttgaagcg 359
Query: 510 actactcagttccggaaattgctttctattgagcgtagtcctccgattgaagaagtgatt 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 actactcagttccggaaattgctttctattgagcgtagtcctccgattgaagaagtgatt 419
Query: 570 gatgctggtgttgtgcctcggtttgtggaatttctcactagagaggattatccacagctt 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gatgctggtgttgtgcctcggtttgtggaatttctcactagagaggattatccacagctt 479
Query: 630 cagtttgaggctgcttgggcattgacaaacattgcttctgggacttcagagaatacaaag 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cagtttgaggctgcttgggcattgacaaacattgcttctgggacttcagagaatacaaag 539
Query: 690 gtggtcattgaacatggtgctgttccgatttttgttcaactattggcttctcagagtgat 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gtggtcattgaacatggtgctgttccgatttttgttcaactattggcttctcagagtgat 599
Query: 750 gatgtccgtgagcaggctgtgtgggcattagggaatgttgctggtgattctccacggtgc 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gatgtccgtgagcaggctgtgtgggcattagggaatgttgctggtgattctccacggtgc 659
Query: 810 agagatcttgtccttggtcaaggagctttgataccattactctctcagttgaatgagcat 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 agagatcttgtccttggtcaaggagctttgataccattactctctcagttgaatgagcat 719
Query: 870 gctaaactctcgatgctgagaaatgctacttggaccctctctaatttctgcaggggcaag 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gctaaactctcgatgctgagaaatgctacttggaccctctctaatttctgcaggggcaag 779
Query: 930 ccacagcctccctttgaccaggtccgtccagcactcccagcccttgaacgcctgattcat 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ccacagcctccctttgaccaggtccgtccagcactcccagcccttgaacgcctgattcat 839
Query: 990 tcgactgatgaggaagtgttaacggatgcatgttgggctctctcttacctttccgatggc 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tcgactgatgaggaagtgttaacggatgcatgttgggctctctcttacctttccgatggc 899
Query: 1050 acaaatgacaaaatccaatctgtcattgaggcaggtgttgttcctcgactcgtcgagctt 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 acaaatgacaaaatccaatctgtcattgaggcaggtgttgttcctcgactcgtcgagctt 959
Query: 1110 ctccagcatcaatcaccatctgtgcttattcctgcccttcgtagtattggtaacattgtc 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 ctccagcatcaatcaccatctgtgcttattcctgcccttcgtagtattggtaacattgtc 1019
Query: 1170 actggagatgatctgcagacacagtgtgtaattagtcatggtgcacttcttagccttttg 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 actggagatgatctgcagacacagtgtgtaattagtcatggtgcacttcttagccttttg 1079
Query: 1230 agccttctgactcacaatcataagaagagcatcaaaaaggaagcttgctggacaatctca 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 agccttctgactcacaatcataagaagagcatcaaaaaggaagcttgctggacaatctca 1139
Query: 1290 aatatcactgctggaaacagggaccagattcaggctgtgtgtgaagctggtttgatttgc 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 aatatcactgctggaaacagggaccagattcaggctgtgtgtgaagctggtttgatttgc 1199
Query: 1350 cctcttgtcaatctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggca 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 cctcttgtcaatctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggca 1259
Query: 1410 atatcaaatgccacttcaggtggttctcctgaccaaatcaagtacatggtggaacaggga 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 atatcaaatgccacttcaggtggttctcctgaccaaatcaagtacatggtggaacaggga 1319
Query: 1470 gtcgtgaaaccactgtgtgatcttttggtgtgccctgatccaaggattatcactgtgtgt 1529
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 gtcgtg-aaccactgtgtgatcttttggtgtgccctgatccaaggattatcactgtgtgt 1378
Query: 1530 ctggaaggattggagaacattttgaaagttggggaagctgaaaaggtcacaggaaatacc 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 ctggaaggattggagaacattttgaaagttggggaagctgaaaaggtcacaggaaatacc 1438
Query: 1590 ggggatgtaaacttttatgcacagctgatcgatgatgctgagggattagaaaagattgag 1649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 ggggatgtaaacttttatgcacagctgatcgatgatgctgagggattagaaaagattgag 1498
Query: 1650 aatctgcagagtcatgacaacagcgaaatctatgagaaggcagtgaagattcttgaaacg 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 aatctgcagagtcatgacaacagcgaaatctatgagaaggcagtgaagattcttgaaacg 1558
Query: 1710 tactggttggaagaggaagatgaaactttaccacctggtgatccctctgcacaaggcttc 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 tactggttggaagaggaagatgaaactttaccacctggtgatccctctgcacaaggcttc 1618
Query: 1770 cagtttggaggaggtaatgatgcagccgtaccaccaggtggattcaacttccagtgaagg 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 cagtttggaggaggtaatgatgcagccgtaccaccaggtggattcaacttccagtgaagg 1678
Query: 1830 agctgaacatgacgatttgaagagtcgaaggagcttaaagagtttgggggcactggttaa 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 agctgaacatgacgatttgaagagtcgaaggagcttaaagagtttgggggcactggttaa 1738
Query: 1890 aaagggtatgattagagagtctggtcttctgtgtaaaagtcagatggggtgccttactta 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1739 aaagggtatgattagagagtctggtcttctgtgtaaaagtcagatggggtgccttactta 1798
Query: 1950 gtctggcctggtccggtcagatccagtggttggtgggtttgagtcatggaataagcttgt 2009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1799 gtctggcctggtccggtcagatccagtggttggtgggtttgagtcatggaataagcttgt 1858
Query: 2010 tgggggggagttgggtaggagtcatcaagggatatttatttttgggaaagggtttataag 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1859 tgggggggagttgggtaggagtcatcaagggatatttatttttgggaaagggtttataag 1918
Query: 2070 tttttaaagtgtgatctgatgagaatgtgtctctctgggtttttgttacatttgtactac 2129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1919 tttttaaagtgtgatctgatgagaatgtgtctctctgggtttttgttacatttgtactac 1978
Query: 2130 acaacactgcaaagtcaaacataaaaaagttggtc 2164
|||||||||||||||||||||||||||||||||||
Sbjct: 1979 acaacactgcaaagtcaaacataaaaaagttggtc 2013
>At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMPA1) similar to
importin alpha-1 subunit (Karyopherin alpha-1 subunit,
KAP alpha) [Arabidopsis thaliana] SWISS-PROT:Q96321
Length = 2256
Score = 228 bits (115), Expect = 2e-58
Identities = 550/695 (79%)
Strand = Plus / Plus
Query: 861 aatgagcatgctaaactctcgatgctgagaaatgctacttggaccctctctaatttctgc 920
||||||||||||||| | || ||||| ||||||| ||||||||| | || || |||||
Sbjct: 799 aatgagcatgctaaattgtccatgcttcgaaatgccacttggaccttgtcaaacttctgt 858
Query: 921 aggggcaagccacagcctccctttgaccaggtccgtccagcactcccagcccttgaacgc 980
| |||||||| ||||||| ||||||||||||| || || || || |||||||||||
Sbjct: 859 cgtggcaagcctcagcctcactttgaccaggtcaaacctgctcttcccgcccttgaacga 918
Query: 981 ctgattcattcgactgatgaggaagtgttaacggatgcatgttgggctctctcttacctt 1040
|| |||||||| |||||| ||||| || || ||||| ||||||||||| ||||||||
Sbjct: 919 ctaattcattcagatgatgaagaagtcttgacagatgcctgttgggctctttcttacctc 978
Query: 1041 tccgatggcacaaatgacaaaatccaatctgtcattgaggcaggtgttgttcctcgactc 1100
|| ||||| || |||||||||||||| ||||||| |||| |||||||| || |||
Sbjct: 979 tctgatgggaccaatgacaaaatccagactgtcatccaggccggtgttgtcccaaaactt 1038
Query: 1101 gtcgagcttctccagcatcaatcaccatctgtgcttattcctgcccttcgtagtattggt 1160
|| || ||||||| ||||| || ||||||||||| |||||||| ||||| | | ||||
Sbjct: 1039 gttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgttgga 1098
Query: 1161 aacattgtcactggagatgatctgcagacacagtgtgtaattagtcatggtgcacttctt 1220
|| || || |||||||||||| | || |||||||| || || | | |||||| || | |
Sbjct: 1099 aatatagttactggagatgatatacaaacacagtgcgtgatcaatagtggtgctctacct 1158
Query: 1221 agccttttgagccttctgactcacaatcataagaagagcatcaaaaaggaagcttgctgg 1280
| ||| | ||| || ||||| || |||||||| ||||| || |||||||||||||||
Sbjct: 1159 tgtcttgccaacctgctcactcaaaaccataagaaaagcataaagaaggaagcttgctgg 1218
Query: 1281 acaatctcaaatatcactgctggaaacagggaccagattcaggctgtgtgtgaagctggt 1340
|| || ||||| ||||| || || |||| || ||||| ||| | || ||| ||| |
Sbjct: 1219 acgatttcaaacatcacagcaggcaacaaagatcagatccagacggtagttgaggctaat 1278
Query: 1341 ttgatttgccctcttgtcaatctgcttcaaaatgcggagtttgatataaagaaagaagct 1400
||||||| ||| | || | ||||||||||||||| || ||||| || ||||| ||||||
Sbjct: 1279 ttgatttccccgttggtgagtctgcttcaaaatgctgaatttgacattaagaaggaagct 1338
Query: 1401 gcgtgggcaatatcaaatgccacttcaggtggttctcctgaccaaatcaagtacatggtg 1460
|| |||||||| |||||||| |||||||||||||||| ||| ||||| || ||| |||||
Sbjct: 1339 gcatgggcaatttcaaatgcaacttcaggtggttctcatgatcaaataaaatacctggtg 1398
Query: 1461 gaacagggagtcgtgaaaccactgtgtgatcttttggtgtgccctgatccaaggattatc 1520
|| || || | | |||||| | || ||||| |||| ||||| |||||||| || ||
Sbjct: 1399 gagcaagggtgcataaaaccattatgcgatctcctggtttgcccagatccaagaatcata 1458
Query: 1521 actgtgtgtctggaaggattggagaacattttgaa 1555
||||| || || ||||||||||| |||||||||||
Sbjct: 1459 actgtctgccttgaaggattggaaaacattttgaa 1493
Score = 149 bits (75), Expect = 1e-34
Identities = 114/127 (89%)
Strand = Plus / Plus
Query: 217 ccatgtctttgagacctaacgctaagactgaggttcgccggaaccgctacaaagtggcgg 276
||||||| ||||||| ||||||||||| ||||||||||||||||| |||||||| || |
Sbjct: 170 ccatgtcactgagacccaacgctaagacggaggttcgccggaaccgatacaaagttgcag 229
Query: 277 tggatgctgaggaaggaagacggaggagagaggacaacatggtcgagatccgtaagagta 336
||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 230 tggatgcggaggaaggacgacggaggagagaagacaacatggttgagatccgtaaaagca 289
Query: 337 agcgtga 343
|||||||
Sbjct: 290 agcgtga 296
Score = 89.7 bits (45), Expect = 1e-16
Identities = 249/317 (78%)
Strand = Plus / Plus
Query: 510 actactcagttccggaaattgctttctattgagcgtagtcctccgattgaagaagtgatt 569
|||||||||||| |||| | || ||||||||| | |||||||| || || ||||||||
Sbjct: 448 actactcagttcaggaagcttctctctattgagagaagtcctccaatcgaggaagtgata 507
Query: 570 gatgctggtgttgtgcctcggtttgtggaatttctcactagagaggattatccacagctt 629
|||||||||||| ||| ||||||| || ||||| | | ||| ||||| || ||
Sbjct: 508 agtgctggtgttgttcctaggtttgttgagtttcttaagaaagaagattaccccgccatt 567
Query: 630 cagtttgaggctgcttgggcattgacaaacattgcttctgggacttcagagaatacaaag 689
||||||||||| |||||||| | ||||||||||| ||||| || || || | || |||
Sbjct: 568 cagtttgaggcagcttgggctctaacaaacattgcatctggaacatcggatcacactaag 627
Query: 690 gtggtcattgaacatggtgctgttccgatttttgttcaactattggcttctcagagtgat 749
|| || || || || ||||||||| || |||||||| || | ||||| | || |||
Sbjct: 628 gttgtaatcgatcacaatgctgttccaatctttgttcagcttcttgcttcccctagcgat 687
Query: 750 gatgtccgtgagcaggctgtgtgggcattagggaatgttgctggtgattctccacggtgc 809
||||| ||||| |||||||| ||||| || || || |||||||||||||| |||||||||
Sbjct: 688 gatgttcgtgaacaggctgtatgggctttgggtaacgttgctggtgattcaccacggtgc 747
Query: 810 agagatcttgtccttgg 826
| |||||||| |||||
Sbjct: 748 cgtgatcttgttcttgg 764
Score = 83.8 bits (42), Expect = 6e-15
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 1611 cagctgatcgatgatgctgagggattagaaaagattgagaatctgcagagtcatgacaac 1670
|||||||| |||||||| || || |||||||||| ||||| || ||||| |||||||||
Sbjct: 1549 cagctgattgatgatgcagaagggctagaaaagatcgagaaccttcagagccatgacaac 1608
Query: 1671 agcgaaatctatgagaaggcagtgaagattcttgaaacgtactggttggaagaggaagat 1730
| || |||||||||||||| || || ||||| || || |||||| | ||||||||||||
Sbjct: 1609 aatgagatctatgagaaggctgttaaaattctggagacatactggcttgaagaggaagat 1668
Query: 1731 ga 1732
||
Sbjct: 1669 ga 1670
>At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMPA1) similar to
importin alpha-1 subunit (Karyopherin alpha-1 subunit,
KAP alpha) [Arabidopsis thaliana] SWISS-PROT:Q96321
Length = 2330
Score = 228 bits (115), Expect = 2e-58
Identities = 550/695 (79%)
Strand = Plus / Plus
Query: 861 aatgagcatgctaaactctcgatgctgagaaatgctacttggaccctctctaatttctgc 920
||||||||||||||| | || ||||| ||||||| ||||||||| | || || |||||
Sbjct: 863 aatgagcatgctaaattgtccatgcttcgaaatgccacttggaccttgtcaaacttctgt 922
Query: 921 aggggcaagccacagcctccctttgaccaggtccgtccagcactcccagcccttgaacgc 980
| |||||||| ||||||| ||||||||||||| || || || || |||||||||||
Sbjct: 923 cgtggcaagcctcagcctcactttgaccaggtcaaacctgctcttcccgcccttgaacga 982
Query: 981 ctgattcattcgactgatgaggaagtgttaacggatgcatgttgggctctctcttacctt 1040
|| |||||||| |||||| ||||| || || ||||| ||||||||||| ||||||||
Sbjct: 983 ctaattcattcagatgatgaagaagtcttgacagatgcctgttgggctctttcttacctc 1042
Query: 1041 tccgatggcacaaatgacaaaatccaatctgtcattgaggcaggtgttgttcctcgactc 1100
|| ||||| || |||||||||||||| ||||||| |||| |||||||| || |||
Sbjct: 1043 tctgatgggaccaatgacaaaatccagactgtcatccaggccggtgttgtcccaaaactt 1102
Query: 1101 gtcgagcttctccagcatcaatcaccatctgtgcttattcctgcccttcgtagtattggt 1160
|| || ||||||| ||||| || ||||||||||| |||||||| ||||| | | ||||
Sbjct: 1103 gttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgttgga 1162
Query: 1161 aacattgtcactggagatgatctgcagacacagtgtgtaattagtcatggtgcacttctt 1220
|| || || |||||||||||| | || |||||||| || || | | |||||| || | |
Sbjct: 1163 aatatagttactggagatgatatacaaacacagtgcgtgatcaatagtggtgctctacct 1222
Query: 1221 agccttttgagccttctgactcacaatcataagaagagcatcaaaaaggaagcttgctgg 1280
| ||| | ||| || ||||| || |||||||| ||||| || |||||||||||||||
Sbjct: 1223 tgtcttgccaacctgctcactcaaaaccataagaaaagcataaagaaggaagcttgctgg 1282
Query: 1281 acaatctcaaatatcactgctggaaacagggaccagattcaggctgtgtgtgaagctggt 1340
|| || ||||| ||||| || || |||| || ||||| ||| | || ||| ||| |
Sbjct: 1283 acgatttcaaacatcacagcaggcaacaaagatcagatccagacggtagttgaggctaat 1342
Query: 1341 ttgatttgccctcttgtcaatctgcttcaaaatgcggagtttgatataaagaaagaagct 1400
||||||| ||| | || | ||||||||||||||| || ||||| || ||||| ||||||
Sbjct: 1343 ttgatttccccgttggtgagtctgcttcaaaatgctgaatttgacattaagaaggaagct 1402
Query: 1401 gcgtgggcaatatcaaatgccacttcaggtggttctcctgaccaaatcaagtacatggtg 1460
|| |||||||| |||||||| |||||||||||||||| ||| ||||| || ||| |||||
Sbjct: 1403 gcatgggcaatttcaaatgcaacttcaggtggttctcatgatcaaataaaatacctggtg 1462
Query: 1461 gaacagggagtcgtgaaaccactgtgtgatcttttggtgtgccctgatccaaggattatc 1520
|| || || | | |||||| | || ||||| |||| ||||| |||||||| || ||
Sbjct: 1463 gagcaagggtgcataaaaccattatgcgatctcctggtttgcccagatccaagaatcata 1522
Query: 1521 actgtgtgtctggaaggattggagaacattttgaa 1555
||||| || || ||||||||||| |||||||||||
Sbjct: 1523 actgtctgccttgaaggattggaaaacattttgaa 1557
Score = 149 bits (75), Expect = 1e-34
Identities = 114/127 (89%)
Strand = Plus / Plus
Query: 217 ccatgtctttgagacctaacgctaagactgaggttcgccggaaccgctacaaagtggcgg 276
||||||| ||||||| ||||||||||| ||||||||||||||||| |||||||| || |
Sbjct: 234 ccatgtcactgagacccaacgctaagacggaggttcgccggaaccgatacaaagttgcag 293
Query: 277 tggatgctgaggaaggaagacggaggagagaggacaacatggtcgagatccgtaagagta 336
||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 294 tggatgcggaggaaggacgacggaggagagaagacaacatggttgagatccgtaaaagca 353
Query: 337 agcgtga 343
|||||||
Sbjct: 354 agcgtga 360
Score = 89.7 bits (45), Expect = 1e-16
Identities = 249/317 (78%)
Strand = Plus / Plus
Query: 510 actactcagttccggaaattgctttctattgagcgtagtcctccgattgaagaagtgatt 569
|||||||||||| |||| | || ||||||||| | |||||||| || || ||||||||
Sbjct: 512 actactcagttcaggaagcttctctctattgagagaagtcctccaatcgaggaagtgata 571
Query: 570 gatgctggtgttgtgcctcggtttgtggaatttctcactagagaggattatccacagctt 629
|||||||||||| ||| ||||||| || ||||| | | ||| ||||| || ||
Sbjct: 572 agtgctggtgttgttcctaggtttgttgagtttcttaagaaagaagattaccccgccatt 631
Query: 630 cagtttgaggctgcttgggcattgacaaacattgcttctgggacttcagagaatacaaag 689
||||||||||| |||||||| | ||||||||||| ||||| || || || | || |||
Sbjct: 632 cagtttgaggcagcttgggctctaacaaacattgcatctggaacatcggatcacactaag 691
Query: 690 gtggtcattgaacatggtgctgttccgatttttgttcaactattggcttctcagagtgat 749
|| || || || || ||||||||| || |||||||| || | ||||| | || |||
Sbjct: 692 gttgtaatcgatcacaatgctgttccaatctttgttcagcttcttgcttcccctagcgat 751
Query: 750 gatgtccgtgagcaggctgtgtgggcattagggaatgttgctggtgattctccacggtgc 809
||||| ||||| |||||||| ||||| || || || |||||||||||||| |||||||||
Sbjct: 752 gatgttcgtgaacaggctgtatgggctttgggtaacgttgctggtgattcaccacggtgc 811
Query: 810 agagatcttgtccttgg 826
| |||||||| |||||
Sbjct: 812 cgtgatcttgttcttgg 828
Score = 83.8 bits (42), Expect = 6e-15
Identities = 102/122 (83%)
Strand = Plus / Plus
Query: 1611 cagctgatcgatgatgctgagggattagaaaagattgagaatctgcagagtcatgacaac 1670
|||||||| |||||||| || || |||||||||| ||||| || ||||| |||||||||
Sbjct: 1613 cagctgattgatgatgcagaagggctagaaaagatcgagaaccttcagagccatgacaac 1672
Query: 1671 agcgaaatctatgagaaggcagtgaagattcttgaaacgtactggttggaagaggaagat 1730
| || |||||||||||||| || || ||||| || || |||||| | ||||||||||||
Sbjct: 1673 aatgagatctatgagaaggctgttaaaattctggagacatactggcttgaagaggaagat 1732
Query: 1731 ga 1732
||
Sbjct: 1733 ga 1734
>At5g49310.1 68418.m06102 importin alpha-1 subunit, putative similar to importin
alpha-1 subunit (Karyopherin alpha-1 subunit, KAP alpha)
[Arabidopsis thaliana] SWISS-PROT:Q96321
Length = 1560
Score = 93.7 bits (47), Expect = 6e-18
Identities = 143/175 (81%)
Strand = Plus / Plus
Query: 625 agcttcagtttgaggctgcttgggcattgacaaacattgcttctgggacttcagagaata 684
||||||||||||||||||||||||| || ||||||||||||||||| | || ||| |||
Sbjct: 386 agcttcagtttgaggctgcttgggctttaacaaacattgcttctggcgcatctgagcata 445
Query: 685 caaaggtggtcattgaacatggtgctgttccgatttttgttcaactattggcttctcaga 744
| ||||| || ||||| || |||| ||| || | |||||||| || | ||||| |
Sbjct: 446 ccaaggtagtgattgatcacggtgttgtgccactctttgttcagcttcttgcttcccctg 505
Query: 745 gtgatgatgtccgtgagcaggctgtgtgggcattagggaatgttgctggtgattc 799
|||||||||||||||||||||| | |||| | | || |||||||||||||||||
Sbjct: 506 atgatgatgtccgtgagcaggctatatggggactgggtaatgttgctggtgattc 560
Score = 48.1 bits (24), Expect = 3e-04
Identities = 78/96 (81%)
Strand = Plus / Plus
Query: 1636 tagaaaagattgagaatctgcagagtcatgacaacagcgaaatctatgagaaggcagtga 1695
|||||||||||||||| ||||| |||| ||||| || ||||| |||||||| ||||
Sbjct: 1388 tagaaaagattgagaacttgcagcaccatggcaacaatgagatctacgagaaggctgtga 1447
Query: 1696 agattcttgaaacgtactggttggaagaggaagatg 1731
||||||| |||| ||| || | | |||||||||||
Sbjct: 1448 agattctgcaaacatacgggcttgtagaggaagatg 1483
Score = 46.1 bits (23), Expect = 0.001
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 1380 tttgatataaagaaagaagctgcgtgggcaatatcaaatgccacttcaggtggttctcct 1439
||||| ||||||||||||||| |||||||| |||||||| | ||||||||||||
Sbjct: 1141 tttgacataaagaaagaagctatatgggcaatttcaaatgcttccgtgggtggttctcct 1200
Query: 1440 gaccaaatcaagtacatggtgga 1462
| |||||||| ||| |||||||
Sbjct: 1201 aatcaaatcaaatacttggtgga 1223
Score = 42.1 bits (21), Expect = 0.020
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 1268 ggaagcttgctggacaatctcaaatatcactgc 1300
||||||||||||||| || ||||| ||||||||
Sbjct: 1029 ggaagcttgctggacgatttcaaacatcactgc 1061
>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to importin alpha-2
subunit (Karyopherin alpha-2 subunit) (KAP alpha)
SP:O04294 from [Arabidopsis thaliana]
Length = 1918
Score = 67.9 bits (34), Expect = 3e-10
Identities = 76/90 (84%)
Strand = Plus / Plus
Query: 1363 tgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggcaatatcaaatgcca 1422
||||||||| ||| ||||| || |||| ||||||||||| |||| |||||||||||| |
Sbjct: 1226 tgcttcaaagtgcagagttcgaagtaaaaaaagaagctgcttggggaatatcaaatgcta 1285
Query: 1423 cttcaggtggttctcctgaccaaatcaagt 1452
|||| ||||| ||| ||| ||||||||||
Sbjct: 1286 cttctggtggcactcatgatcaaatcaagt 1315
Score = 63.9 bits (32), Expect = 5e-09
Identities = 77/92 (83%)
Strand = Plus / Plus
Query: 627 cttcagtttgaggctgcttgggcattgacaaacattgcttctgggacttcagagaataca 686
|||||||||||||| |||||||| | || ||||||||||| ||||| |||||||| |||
Sbjct: 490 cttcagtttgaggcagcttgggcgctcaccaacattgcttcagggacatcagagaacaca 549
Query: 687 aaggtggtcattgaacatggtgctgttccgat 718
|| || |||||||| ||| ||||| |||||
Sbjct: 550 aatgtcatcattgaaagtggagctgtcccgat 581
Score = 56.0 bits (28), Expect = 1e-06
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1251 aagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctggaaa 1306
|||||||| ||||| ||||||||||||||||| ||||| || || || ||||||||
Sbjct: 1114 aagaagagtatcaagaaggaagcttgctggactatctccaacattacagctggaaa 1169
Score = 52.0 bits (26), Expect = 2e-05
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 1635 ttagaaaagattgagaatctgcagagtcatgacaacagcgaaatctatgagaaggcagtg 1694
||||| |||||||||||||| |||||||| ||||||| || ||||| || || || |||
Sbjct: 1498 ttagagaagattgagaatcttcagagtcacgacaacaatgatatctacgacaaagccgtg 1557
Query: 1695 aagattcttgaaac 1708
||||| || |||||
Sbjct: 1558 aagatcctcgaaac 1571
Score = 52.0 bits (26), Expect = 2e-05
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 744 agtgatgatgtccgtgagcaggctgtgtgggcattagggaatgttgctgg 793
||||| |||||||| || |||||||| |||||||| || |||||||||||
Sbjct: 607 agtgaagatgtccgcgaacaggctgtttgggcattgggaaatgttgctgg 656
Score = 46.1 bits (23), Expect = 0.001
Identities = 68/83 (81%)
Strand = Plus / Plus
Query: 1014 gatgcatgttgggctctctcttacctttccgatggcacaaatgacaaaatccaatctgtc 1073
|||||||| |||||||| || ||||| || ||| |||| |||||||| ||| | |||
Sbjct: 877 gatgcatgctgggctctgtcatacctctcggataattcaaacgacaaaatacaagcagtc 936
Query: 1074 attgaggcaggtgttgttcctcg 1096
||||| ||||| |||||||||||
Sbjct: 937 attgaagcaggagttgttcctcg 959
Score = 38.2 bits (19), Expect = 0.31
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 882 atgctgagaaatgctacttggac 904
||||||||||||||||| |||||
Sbjct: 745 atgctgagaaatgctacatggac 767
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 74,332
Number of Sequences: 29161
Number of extensions: 74332
Number of successful extensions: 1860
Number of sequences better than 10.0: 53
length of query: 2215
length of database: 44,058,232
effective HSP length: 18
effective length of query: 2197
effective length of database: 43,533,334
effective search space: 95642734798
effective search space used: 95642734798
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)