BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.6.cl.699.Contig1
(1796 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g21326.1 68418.m02534 protein kinase family protein / NA... 3509 0.0
At5g21222.1 68418.m02532 protein kinase family protein cont... 761 0.0
At2g26980.4 68415.m03240 CBL-interacting protein kinase 3 (... 101 2e-20
At2g26980.1 68415.m03239 CBL-interacting protein kinase 3 (... 101 2e-20
At2g26980.2 68415.m03238 CBL-interacting protein kinase 3 (... 101 2e-20
>At5g21326.1 68418.m02534 protein kinase family protein / NAF domain-containing
protein contains Pfam profiles: PF00069 protein kinase
domain, PF03822 NAF domain
Length = 1784
Score = 3509 bits (1770), Expect = 0.0
Identities = 1784/1786 (99%), Gaps = 2/1786 (0%)
Strand = Plus / Plus
Query: 1 atctcttgttgctccttgtattagcccatcatttttttatttctcctgcgaattctccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atctcttgttgctccttgtattagcccatcatttttttatttctcctgcgaattctccgc 60
Query: 61 catagattttcttttgaatttctcctgctaactcttgagctccccaaaggcggctacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catagattttcttttgaatttctcctgctaactcttgagctccccaaaggcggctacatc 120
Query: 121 ggttttgtcacctctactcgctcacttttctccgtccaattttgcagcttttgaagatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggttttgtcacctctactcgctcacttttctccgtccaattttgcagcttttgaagatca 180
Query: 181 agaggtgaacattcggagtgatgaatcggccaaaggttcagcgtcgtgttggaaagtatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaggtgaacattcggagtgatgaatcggccaaaggttcagcgtcgtgttggaaagtatg 240
Query: 241 aggttggaaagacgcttggacaaggcacttttgcgaaagttcggtgtgctgttaatactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggttggaaagacgcttggacaaggcacttttgcgaaagttcggtgtgctgttaatactg 300
Query: 301 agacaggagaacgcgtggctctcaaaatacttgataaggagaaggttcttaagcataaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agacaggagaacgcgtggctctcaaaatacttgataaggagaaggttcttaagcataaga 360
Query: 361 tggctgaacagataaggagagaaatttgtactatgaagctgataaaccatccaaatgtag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggctgaacagataaggagagaaatttgtactatgaagctgataaaccatccaaatgtag 420
Query: 421 tgcggctgtatgaggttttggcgagcaagactaagatatatattgttctagagttcggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcggctgtatgaggttttggcgagcaagactaagatatatattgttctagagttcggca 480
Query: 481 ctggtggagagctttttgacaaaattgtacatgatgggcgcttgaaagaagagaatgcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctggtggagagctttttgacaaaattgtacatgatgggcgcttgaaagaagagaatgcac 540
Query: 541 ggaaatattttcagcagcttattaatgcagttgattactgccatagcaggggaagtgtac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 541 ggaaatattttcagcagcttattaatgcagttgattactgccatagcagggga-gtgtac 599
Query: 601 caccgggacttaaagccggaaaaacttgcttctagatgctcaaggaaatctgaaagtctc 660
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 600 caccgggacttaaagccggaaaa-cttgcttctagatgctcaaggaaatctgaaagtctc 658
Query: 661 tgattttggattgagtgcgttgtcccgacaagtcaggggtgatggtcttcttcacactgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tgattttggattgagtgcgttgtcccgacaagtcaggggtgatggtcttcttcacactgc 718
Query: 721 atgcggaactccaaactatgctgctcctgaggttcttaatgatcaaggttatgacggggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 atgcggaactccaaactatgctgctcctgaggttcttaatgatcaaggttatgacggggc 778
Query: 781 aaccgcagacttgtggtcctgtggagtgatactctttgtactacttgctggctacttgcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 aaccgcagacttgtggtcctgtggagtgatactctttgtactacttgctggctacttgcc 838
Query: 841 tttcgaggattctaatctcatgacgctgtataaaaagataatagctggtgaatatcattg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 tttcgaggattctaatctcatgacgctgtataaaaagataatagctggtgaatatcattg 898
Query: 901 tcctccttggctctctcctggtgctaagaacttgattgtccgaatcttggatccaaaccc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 tcctccttggctctctcctggtgctaagaacttgattgtccgaatcttggatccaaaccc 958
Query: 961 tatgactcgtatcacaattccagaggttctgggagatgcgtggttcaagaaaaattacaa 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 tatgactcgtatcacaattccagaggttctgggagatgcgtggttcaagaaaaattacaa 1018
Query: 1021 gccagctgttttcgaggagaaggaagaagccaacttggatgatgtggacgctgttttcaa 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 gccagctgttttcgaggagaaggaagaagccaacttggatgatgtggacgctgttttcaa 1078
Query: 1081 agattcagaagagcatcatgtcacagaaaagaaagaggagcaaccaacttcaatgaatgc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 agattcagaagagcatcatgtcacagaaaagaaagaggagcaaccaacttcaatgaatgc 1138
Query: 1141 ctttgagttgatatcaatgtcgagagctctggatctcgggaatttgtttgaagaagaaga 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 ctttgagttgatatcaatgtcgagagctctggatctcgggaatttgtttgaagaagaaga 1198
Query: 1201 gggattcaagcgagaaacgagatttgctgctaaaggtgctgctaatgatttagtccaaaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 gggattcaagcgagaaacgagatttgctgctaaaggtgctgctaatgatttagtccaaaa 1258
Query: 1261 gattgaagaagcttctaagccgcttggtttcgatattcaaaagaaaaactataagatgag 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 gattgaagaagcttctaagccgcttggtttcgatattcaaaagaaaaactataagatgag 1318
Query: 1321 acttgaaaacgtgactgctggaaggaaaggaaacctaagagttgcaactgagatatttca 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1319 acttgaaaacgtgactgctggaaggaaaggaaacctaagagttgcaactgagatatttca 1378
Query: 1381 agtatcaccgtctcttcatatgatcgaagtccggaaaacgaaaggggatacactagaatt 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 agtatcaccgtctcttcatatgatcgaagtccggaaaacgaaaggggatacactagaatt 1438
Query: 1441 ccataagttctacaagaagctctcaacctcacttaacgatgtggtttggaaatctggcga 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 ccataagttctacaagaagctctcaacctcacttaacgatgtggtttggaaatctggcga 1498
Query: 1501 gagctctggtctaagcaaataagaaaaaagactgatgattcaagtccttgctttgactat 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 gagctctggtctaagcaaataagaaaaaagactgatgattcaagtccttgctttgactat 1558
Query: 1561 cttttatttagctttttgctgatactttctttcaagactcaattcttttaaatattagag 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 cttttatttagctttttgctgatactttctttcaagactcaattcttttaaatattagag 1618
Query: 1621 acaaaaagccatgagattgatgactctgtagatatcgaagcatgtgcagtaagtttatgc 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 acaaaaagccatgagattgatgactctgtagatatcgaagcatgtgcagtaagtttatgc 1678
Query: 1681 tgttcatataattgcaaacttcgattgtgttgtgtcacaaacattttgtctaactgggtt 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 tgttcatataattgcaaacttcgattgtgttgtgtcacaaacattttgtctaactgggtt 1738
Query: 1741 tacttactactattaatgctcaaagatgctgtaagaacgttgaagt 1786
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1739 tacttactactattaatgctcaaagatgctgtaagaacgttgaagt 1784
>At5g21222.1 68418.m02532 protein kinase family protein contains Pfam profile:
PF00069 protein kinase domain
Length = 2957
Score = 761 bits (384), Expect = 0.0
Identities = 716/824 (86%), Gaps = 2/824 (0%)
Strand = Plus / Plus
Query: 269 ttttgcgaaagttcggtgtgctgttaatactgagacaggagaacgcgtggctctcaaaat 328
||||| |||| | ||| |||||||| | || ||||||||||| | |||||| | | ||
Sbjct: 336 ttttgggaaactgcggagtgctgttgacacagagacaggagaccctgtggctttgatgat 395
Query: 329 acttgataaggagaaggttcttaagcataagatggctgaacagataaggagagaaatttg 388
|||||||| || |||||||| |||||||||||||||||||| |||| |||||||||||
Sbjct: 396 ccttgataaagacaaggttctgaagcataagatggctgaacaaataaagagagaaatttc 455
Query: 389 tactatgaagctgataaaccatccaaatgtagtgcggctgtatgaggttttggcgagcaa 448
|| |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 456 tattatgaagctgatcaaccatccaaatgtagtgcagctttatgaggttttggcgagcaa 515
Query: 449 gactaagatatatattgttctagagttcggcactggtggagagctttttgacaaaattgt 508
| | |||||||||||||| ||||||||| || ||||||| ||||||||||||| |||
Sbjct: 516 ggcgaagatatatattgtcctagagttcatcagtggtggaaagctttttgacaagattaa 575
Query: 509 acatgatgggcgcttgaaagaagagaatgcacggaaatattttcagcagcttattaatgc 568
| ||||||||||| |||| ||||| | |||| || |||||| ||||||||||| |||||
Sbjct: 576 aaatgatgggcgcatgaatgaagacgaagcacagagatatttccagcagcttatcaatgc 635
Query: 569 agttgattactgccatagcaggggaagtgtaccaccgggacttaaagccggaaaaacttg 628
||||||||||||||| ||||||||| ||||||||| | ||||||||||| ||||| |||
Sbjct: 636 agttgattactgccacagcagggga-gtgtaccacagagacttaaagccagaaaat-ttg 693
Query: 629 cttctagatgctcaaggaaatctgaaagtctctgattttggattgagtgcgttgtcccga 688
||||| ||||| |||| ||| |||||||| |||| |||||||||| ||| ||||||| |
Sbjct: 694 cttcttgatgcgcaagagaatttgaaagtcgctgaatttggattgattgccttgtcccaa 753
Query: 689 caagtcaggggtgatggtcttcttcacactgcatgcggaactccaaactatgctgctcct 748
|||| | |||| ||||| |||| |||||||||||| |||| |||| | ||||||||||||
Sbjct: 754 caagccgggggagatggccttcgtcacactgcatgtggaaatccagattatgctgctcct 813
Query: 749 gaggttcttaatgatcaaggttatgacggggcaaccgcagacttgtggtcctgtggagtg 808
|||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||
Sbjct: 814 gaggttcttaatgatcaaggctatgatggggcaaaggcagacttgtggtcctgtggagtg 873
Query: 809 atactctttgtactacttgctggctacttgcctttcgaggattctaatctcatgacgctg 868
||||||||||||||||||||||| || ||||||||||||||||||| ||||| |||||||
Sbjct: 874 atactctttgtactacttgctgggtatttgcctttcgaggattctagtctcacgacgctg 933
Query: 869 tataaaaagataatagctggtgaatatcattgtcctccttggctctctcctggtgctaag 928
|| |||||||| | ||| ||| | | ||||||||||||||||||| |||||| ||||
Sbjct: 934 tacaaaaagatctcatctgctgattttagttgtcctccttggctctcttctggtgttaag 993
Query: 929 aacttgattgtccgaatcttggatccaaaccctatgactcgtatcacaattccagaggtt 988
|| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 994 aatttgatcgtccgaatcttggatccaaaccctatgactcgtataacaattccagagatt 1053
Query: 989 ctgggagatgcgtggttcaagaaaaattacaagccagctgttttcgaggagaaggaagaa 1048
||| ||||| ||||||||||||| |||||||||||||||| || || |||||| |||||
Sbjct: 1054 ttggaagatgtgtggttcaagaaagattacaagccagctgtatttgaagagaagaaagaa 1113
Query: 1049 gccaacttggatgatgtggacgctgttttcaaagattcagaaga 1092
|| || |||| ||||||||| ||||||||||||||||| |||||
Sbjct: 1114 gcaaatttggctgatgtggaagctgttttcaaagattctgaaga 1157
>At2g26980.4 68415.m03240 CBL-interacting protein kinase 3 (CIPK3) identical to
CBL-interacting protein kinase 3 [Arabidopsis thaliana]
gi|9280638|gb|AAF86507
Length = 1927
Score = 101 bits (51), Expect = 2e-20
Identities = 207/259 (79%)
Strand = Plus / Plus
Query: 657 tctctgattttggattgagtgcgttgtcccgacaagtcaggggtgatggtcttcttcaca 716
|||| ||||||||||| ||||| ||||||| ||||||||||| |||||| || | || |
Sbjct: 576 tctcagattttggattaagtgctttgtcccaacaagtcagggatgatggactcttgcata 635
Query: 717 ctgcatgcggaactccaaactatgctgctcctgaggttcttaatgatcaaggttatgacg 776
| | || ||||| |||||||| | ||||||||||||||| |||||| ||| ||||| |
Sbjct: 636 catcgtgtggaacaccaaactacgttgctcctgaggttctcaatgatagaggctatgatg 695
Query: 777 gggcaaccgcagacttgtggtcctgtggagtgatactctttgtactacttgctggctact 836
| ||||| || ||| ||||||| || || || |||||| ||| || ||||| || ||||
Sbjct: 696 gagcaacagctgacatgtggtcatgcggtgttgtactctatgtcctgcttgcaggttact 755
Query: 837 tgcctttcgaggattctaatctcatgacgctgtataaaaagataatagctggtgaatatc 896
| ||||| || ||||||||||| |||| || |||||||| ||| | |||||||||
Sbjct: 756 taccttttgatgattctaatctaatgaatctttataaaaaaatatcatctggtgaattca 815
Query: 897 attgtcctccttggctctc 915
| |||||||| ||||||||
Sbjct: 816 actgtcctccgtggctctc 834
Score = 89.7 bits (45), Expect = 8e-17
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 318 gctctcaaaatacttgataaggagaaggttcttaagcataagatggctgaacagataagg 377
|||||||| || |||||||| ||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 239 gctctcaagattcttgataaagagaaagttctcaagcataaaatggctgaacagattaga 298
Query: 378 agagaaatttgtactatgaagctgataaaccatccaaatgt 418
||||| || |||||||||| ||||||| |||||||||||
Sbjct: 299 agagagatagctactatgaagttgataaaacatccaaatgt 339
Score = 63.9 bits (32), Expect = 4e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1001 tggttcaagaaaaattacaagccagctgttttcgaggaga 1040
|||||||||||| ||||||||||| |||||||||||||||
Sbjct: 920 tggttcaagaaagattacaagccacctgttttcgaggaga 959
>At2g26980.1 68415.m03239 CBL-interacting protein kinase 3 (CIPK3) identical to
CBL-interacting protein kinase 3 [Arabidopsis thaliana]
gi|9280638|gb|AAF86507
Length = 1751
Score = 101 bits (51), Expect = 2e-20
Identities = 207/259 (79%)
Strand = Plus / Plus
Query: 657 tctctgattttggattgagtgcgttgtcccgacaagtcaggggtgatggtcttcttcaca 716
|||| ||||||||||| ||||| ||||||| ||||||||||| |||||| || | || |
Sbjct: 576 tctcagattttggattaagtgctttgtcccaacaagtcagggatgatggactcttgcata 635
Query: 717 ctgcatgcggaactccaaactatgctgctcctgaggttcttaatgatcaaggttatgacg 776
| | || ||||| |||||||| | ||||||||||||||| |||||| ||| ||||| |
Sbjct: 636 catcgtgtggaacaccaaactacgttgctcctgaggttctcaatgatagaggctatgatg 695
Query: 777 gggcaaccgcagacttgtggtcctgtggagtgatactctttgtactacttgctggctact 836
| ||||| || ||| ||||||| || || || |||||| ||| || ||||| || ||||
Sbjct: 696 gagcaacagctgacatgtggtcatgcggtgttgtactctatgtcctgcttgcaggttact 755
Query: 837 tgcctttcgaggattctaatctcatgacgctgtataaaaagataatagctggtgaatatc 896
| ||||| || ||||||||||| |||| || |||||||| ||| | |||||||||
Sbjct: 756 taccttttgatgattctaatctaatgaatctttataaaaaaatatcatctggtgaattca 815
Query: 897 attgtcctccttggctctc 915
| |||||||| ||||||||
Sbjct: 816 actgtcctccgtggctctc 834
Score = 89.7 bits (45), Expect = 8e-17
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 318 gctctcaaaatacttgataaggagaaggttcttaagcataagatggctgaacagataagg 377
|||||||| || |||||||| ||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 239 gctctcaagattcttgataaagagaaagttctcaagcataaaatggctgaacagattaga 298
Query: 378 agagaaatttgtactatgaagctgataaaccatccaaatgt 418
||||| || |||||||||| ||||||| |||||||||||
Sbjct: 299 agagagatagctactatgaagttgataaaacatccaaatgt 339
Score = 63.9 bits (32), Expect = 4e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1001 tggttcaagaaaaattacaagccagctgttttcgaggaga 1040
|||||||||||| ||||||||||| |||||||||||||||
Sbjct: 920 tggttcaagaaagattacaagccacctgttttcgaggaga 959
Score = 36.2 bits (18), Expect = 1.00
Identities = 39/46 (84%)
Strand = Plus / Plus
Query: 1419 cgaaaggggatacactagaattccataagttctacaagaagctctc 1464
||||||| || || || ||||| || |||||||| |||||||||||
Sbjct: 1422 cgaaaggagacactctcgaatttcacaagttctataagaagctctc 1467
>At2g26980.2 68415.m03238 CBL-interacting protein kinase 3 (CIPK3) identical to
CBL-interacting protein kinase 3 [Arabidopsis thaliana]
gi|9280638|gb|AAF86507
Length = 1685
Score = 101 bits (51), Expect = 2e-20
Identities = 207/259 (79%)
Strand = Plus / Plus
Query: 657 tctctgattttggattgagtgcgttgtcccgacaagtcaggggtgatggtcttcttcaca 716
|||| ||||||||||| ||||| ||||||| ||||||||||| |||||| || | || |
Sbjct: 576 tctcagattttggattaagtgctttgtcccaacaagtcagggatgatggactcttgcata 635
Query: 717 ctgcatgcggaactccaaactatgctgctcctgaggttcttaatgatcaaggttatgacg 776
| | || ||||| |||||||| | ||||||||||||||| |||||| ||| ||||| |
Sbjct: 636 catcgtgtggaacaccaaactacgttgctcctgaggttctcaatgatagaggctatgatg 695
Query: 777 gggcaaccgcagacttgtggtcctgtggagtgatactctttgtactacttgctggctact 836
| ||||| || ||| ||||||| || || || |||||| ||| || ||||| || ||||
Sbjct: 696 gagcaacagctgacatgtggtcatgcggtgttgtactctatgtcctgcttgcaggttact 755
Query: 837 tgcctttcgaggattctaatctcatgacgctgtataaaaagataatagctggtgaatatc 896
| ||||| || ||||||||||| |||| || |||||||| ||| | |||||||||
Sbjct: 756 taccttttgatgattctaatctaatgaatctttataaaaaaatatcatctggtgaattca 815
Query: 897 attgtcctccttggctctc 915
| |||||||| ||||||||
Sbjct: 816 actgtcctccgtggctctc 834
Score = 89.7 bits (45), Expect = 8e-17
Identities = 87/101 (86%)
Strand = Plus / Plus
Query: 318 gctctcaaaatacttgataaggagaaggttcttaagcataagatggctgaacagataagg 377
|||||||| || |||||||| ||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 239 gctctcaagattcttgataaagagaaagttctcaagcataaaatggctgaacagattaga 298
Query: 378 agagaaatttgtactatgaagctgataaaccatccaaatgt 418
||||| || |||||||||| ||||||| |||||||||||
Sbjct: 299 agagagatagctactatgaagttgataaaacatccaaatgt 339
Score = 63.9 bits (32), Expect = 4e-09
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1001 tggttcaagaaaaattacaagccagctgttttcgaggaga 1040
|||||||||||| ||||||||||| |||||||||||||||
Sbjct: 920 tggttcaagaaagattacaagccacctgttttcgaggaga 959
Score = 36.2 bits (18), Expect = 1.00
Identities = 39/46 (84%)
Strand = Plus / Plus
Query: 1419 cgaaaggggatacactagaattccataagttctacaagaagctctc 1464
||||||| || || || ||||| || |||||||| |||||||||||
Sbjct: 1356 cgaaaggagacactctcgaatttcacaagttctataagaagctctc 1401
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 73,424
Number of Sequences: 29161
Number of extensions: 73424
Number of successful extensions: 1796
Number of sequences better than 10.0: 55
length of query: 1796
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1778
effective length of database: 43,533,334
effective search space: 77402267852
effective search space used: 77402267852
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)