BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.5.cl.527.Contig1
(1336 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical... 2617 0.0
At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical... 1701 0.0
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1... 202 6e-51
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2... 115 1e-24
At5g56460.1 68418.m07047 protein kinase, putative contains ... 44 0.003
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to catalase 3
SP:Q42547, GI:3123188 from [Arabidopsis thaliana];
identical to catalase 3 (SEN2) mRNA, partial cds
GI:3158369
Length = 1832
Score = 2617 bits (1320), Expect = 0.0
Identities = 1320/1320 (100%)
Strand = Plus / Plus
Query: 1 gatcttgttgggaacaacactccggtgttcttcatccgtgatgggattcagttcccggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gatcttgttgggaacaacactccggtgttcttcatccgtgatgggattcagttcccggat 518
Query: 61 gttgtccacgcgttgaaacctaacccgaaaacaaacatccaagagtactggaggattctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gttgtccacgcgttgaaacctaacccgaaaacaaacatccaagagtactggaggattctg 578
Query: 121 gactacatgtcccacttgcctgagagtttgctcacatggtgctggatgtttgatgatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gactacatgtcccacttgcctgagagtttgctcacatggtgctggatgtttgatgatgtt 638
Query: 181 ggtattccacaagattacaggcacatggagggtttcggtgtccacacctacactcttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ggtattccacaagattacaggcacatggagggtttcggtgtccacacctacactcttatt 698
Query: 241 gccaaatctggaaaagttctctttgtgaagttccactggaaaccaacttgtgggatcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gccaaatctggaaaagttctctttgtgaagttccactggaaaccaacttgtgggatcaag 758
Query: 301 aatctgactgatgaagaggccaaggttgttggaggagccaatcacagccacgccactaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 aatctgactgatgaagaggccaaggttgttggaggagccaatcacagccacgccactaag 818
Query: 361 gatctccacgatgccattgcatctggcaactaccccgagtggaaacttttcatccagacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gatctccacgatgccattgcatctggcaactaccccgagtggaaacttttcatccagacc 878
Query: 421 atggatcctgcagatgaggataagtttgactttgacccacttgatgtgaccaagatctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 atggatcctgcagatgaggataagtttgactttgacccacttgatgtgaccaagatctgg 938
Query: 481 cctgaggatattttgcctctgcaaccggttggtcgcttggttctgaacaggaccattgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 cctgaggatattttgcctctgcaaccggttggtcgcttggttctgaacaggaccattgac 998
Query: 541 aatttcttcaatgaaactgagcagcttgcgttcaacccgggtcttgtggttcctggaatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 aatttcttcaatgaaactgagcagcttgcgttcaacccgggtcttgtggttcctggaatc 1058
Query: 601 tactactcagacgacaagctgctccagtgtaggatctttgcttatggtgacactcagaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 tactactcagacgacaagctgctccagtgtaggatctttgcttatggtgacactcagaga 1118
Query: 661 catcgccttggaccgaattatttgcagcttccagtcaatgctcccaaatgtgctcaccac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 catcgccttggaccgaattatttgcagcttccagtcaatgctcccaaatgtgctcaccac 1178
Query: 721 aacaatcaccatgaaggttttatgaacttcatgcacagagatgaggagatcaattactac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 aacaatcaccatgaaggttttatgaacttcatgcacagagatgaggagatcaattactac 1238
Query: 781 ccctcaaagtttgatcctgtccgctgcgctgagaaagttcccacccctacaaactcctac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 ccctcaaagtttgatcctgtccgctgcgctgagaaagttcccacccctacaaactcctac 1298
Query: 841 actggaattcgaacaaagtgcgtcatcaagaaagagaacaacttcaaacaggctggagac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 actggaattcgaacaaagtgcgtcatcaagaaagagaacaacttcaaacaggctggagac 1358
Query: 901 aggtacagatcatgggcaccagacaggcaagacaggtttgttaagagatgggtggagatt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1359 aggtacagatcatgggcaccagacaggcaagacaggtttgttaagagatgggtggagatt 1418
Query: 961 ctatcggagccacgtctcacccacgagatccgcggcatctggatctcttactggtctcag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1419 ctatcggagccacgtctcacccacgagatccgcggcatctggatctcttactggtctcag 1478
Query: 1021 gctgatcgatccttgggacagaaacttgcaagccgtctgaacgtgaggccaagcatctag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1479 gctgatcgatccttgggacagaaacttgcaagccgtctgaacgtgaggccaagcatctag 1538
Query: 1081 aggccaatctccatataagctcagtctatgtgaggtacaatcaatctcatcgatctatca 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1539 aggccaatctccatataagctcagtctatgtgaggtacaatcaatctcatcgatctatca 1598
Query: 1141 tcgcttggtcgttaaatccgtcaaaaagataatcacatgtgttgttgtttcttgtctata 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 tcgcttggtcgttaaatccgtcaaaaagataatcacatgtgttgttgtttcttgtctata 1658
Query: 1201 taataataatgcttgtaatcccaaaaactcatgtttccttcctttctactctcactgtct 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1659 taataataatgcttgtaatcccaaaaactcatgtttccttcctttctactctcactgtct 1718
Query: 1261 ttgtaatctctttttacaataaatcaatgtttcttgaagcagtaaacaatttctaagatt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1719 ttgtaatctctttttacaataaatcaatgtttcttgaagcagtaaacaatttctaagatt 1778
>At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to catalase 3
SP:Q42547, GI:3123188 from [Arabidopsis thaliana];
identical to catalase 3 (SEN2) mRNA, partial cds
GI:3158369
Length = 1931
Score = 1701 bits (858), Expect = 0.0
Identities = 858/858 (100%)
Strand = Plus / Plus
Query: 1 gatcttgttgggaacaacactccggtgttcttcatccgtgatgggattcagttcccggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gatcttgttgggaacaacactccggtgttcttcatccgtgatgggattcagttcccggat 518
Query: 61 gttgtccacgcgttgaaacctaacccgaaaacaaacatccaagagtactggaggattctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gttgtccacgcgttgaaacctaacccgaaaacaaacatccaagagtactggaggattctg 578
Query: 121 gactacatgtcccacttgcctgagagtttgctcacatggtgctggatgtttgatgatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gactacatgtcccacttgcctgagagtttgctcacatggtgctggatgtttgatgatgtt 638
Query: 181 ggtattccacaagattacaggcacatggagggtttcggtgtccacacctacactcttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ggtattccacaagattacaggcacatggagggtttcggtgtccacacctacactcttatt 698
Query: 241 gccaaatctggaaaagttctctttgtgaagttccactggaaaccaacttgtgggatcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gccaaatctggaaaagttctctttgtgaagttccactggaaaccaacttgtgggatcaag 758
Query: 301 aatctgactgatgaagaggccaaggttgttggaggagccaatcacagccacgccactaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 aatctgactgatgaagaggccaaggttgttggaggagccaatcacagccacgccactaag 818
Query: 361 gatctccacgatgccattgcatctggcaactaccccgagtggaaacttttcatccagacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gatctccacgatgccattgcatctggcaactaccccgagtggaaacttttcatccagacc 878
Query: 421 atggatcctgcagatgaggataagtttgactttgacccacttgatgtgaccaagatctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 atggatcctgcagatgaggataagtttgactttgacccacttgatgtgaccaagatctgg 938
Query: 481 cctgaggatattttgcctctgcaaccggttggtcgcttggttctgaacaggaccattgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 cctgaggatattttgcctctgcaaccggttggtcgcttggttctgaacaggaccattgac 998
Query: 541 aatttcttcaatgaaactgagcagcttgcgttcaacccgggtcttgtggttcctggaatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 aatttcttcaatgaaactgagcagcttgcgttcaacccgggtcttgtggttcctggaatc 1058
Query: 601 tactactcagacgacaagctgctccagtgtaggatctttgcttatggtgacactcagaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 tactactcagacgacaagctgctccagtgtaggatctttgcttatggtgacactcagaga 1118
Query: 661 catcgccttggaccgaattatttgcagcttccagtcaatgctcccaaatgtgctcaccac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 catcgccttggaccgaattatttgcagcttccagtcaatgctcccaaatgtgctcaccac 1178
Query: 721 aacaatcaccatgaaggttttatgaacttcatgcacagagatgaggagatcaattactac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 aacaatcaccatgaaggttttatgaacttcatgcacagagatgaggagatcaattactac 1238
Query: 781 ccctcaaagtttgatcctgtccgctgcgctgagaaagttcccacccctacaaactcctac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1239 ccctcaaagtttgatcctgtccgctgcgctgagaaagttcccacccctacaaactcctac 1298
Query: 841 actggaattcgaacaaag 858
||||||||||||||||||
Sbjct: 1299 actggaattcgaacaaag 1316
Score = 920 bits (464), Expect = 0.0
Identities = 464/464 (100%)
Strand = Plus / Plus
Query: 857 agtgcgtcatcaagaaagagaacaacttcaaacaggctggagacaggtacagatcatggg 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 agtgcgtcatcaagaaagagaacaacttcaaacaggctggagacaggtacagatcatggg 1473
Query: 917 caccagacaggcaagacaggtttgttaagagatgggtggagattctatcggagccacgtc 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 caccagacaggcaagacaggtttgttaagagatgggtggagattctatcggagccacgtc 1533
Query: 977 tcacccacgagatccgcggcatctggatctcttactggtctcaggctgatcgatccttgg 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 tcacccacgagatccgcggcatctggatctcttactggtctcaggctgatcgatccttgg 1593
Query: 1037 gacagaaacttgcaagccgtctgaacgtgaggccaagcatctagaggccaatctccatat 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 gacagaaacttgcaagccgtctgaacgtgaggccaagcatctagaggccaatctccatat 1653
Query: 1097 aagctcagtctatgtgaggtacaatcaatctcatcgatctatcatcgcttggtcgttaaa 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 aagctcagtctatgtgaggtacaatcaatctcatcgatctatcatcgcttggtcgttaaa 1713
Query: 1157 tccgtcaaaaagataatcacatgtgttgttgtttcttgtctatataataataatgcttgt 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 tccgtcaaaaagataatcacatgtgttgttgtttcttgtctatataataataatgcttgt 1773
Query: 1217 aatcccaaaaactcatgtttccttcctttctactctcactgtctttgtaatctcttttta 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 aatcccaaaaactcatgtttccttcctttctactctcactgtctttgtaatctcttttta 1833
Query: 1277 caataaatcaatgtttcttgaagcagtaaacaatttctaagatt 1320
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 caataaatcaatgtttcttgaagcagtaaacaatttctaagatt 1877
>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2511725 from
[Arabidopsis thaliana]
Length = 1929
Score = 202 bits (102), Expect = 6e-51
Identities = 378/470 (80%)
Strand = Plus / Plus
Query: 328 gttggaggagccaatcacagccacgccactaaggatctccacgatgccattgcatctggc 387
||||||||||||||||||||||| ||||| || |||||| | || | || ||| | ||
Sbjct: 809 gttggaggagccaatcacagccatgccaccaaagatctctatgactcgatcgcagccggg 868
Query: 388 aactaccccgagtggaaacttttcatccagaccatggatcctgcagatgaggataagttt 447
||||| || ||||||| || ||| | ||| ||||||||||| |||| || || |||
Sbjct: 869 aactatccgcagtggaatctcttcgttcaggtgatggatcctgcccatgaagacaaattt 928
Query: 448 gactttgacccacttgatgtgaccaagatctggcctgaggatattttgcctctgcaaccg 507
||||| || || |||||||| || |||||||||||||| ||||| |||||| | |||||
Sbjct: 929 gacttcgatccgcttgatgtcacaaagatctggcctgaagatatcttgcctttacaacct 988
Query: 508 gttggtcgcttggttctgaacaggaccattgacaatttcttcaatgaaactgagcagctt 567
|||||||||||||| |||||| | ||| ||||| ||||| ||||| | || ||| ||
Sbjct: 989 gttggtcgcttggtcttgaacaaaaacatcgacaacttctttaatgagaacgaacagatt 1048
Query: 568 gcgttcaacccgggtcttgtggttcctggaatctactactcagacgacaagctgctccag 627
|| ||| || | |||||||||||| || ||| |||| ||||| || ||||| ||||||
Sbjct: 1049 gcattctgtcctgctcttgtggttccaggcatccactattcagatgataagctactccag 1108
Query: 628 tgtaggatctttgcttatggtgacactcagagacatcgccttggaccgaattatttgcag 687
||||||| | || | ||| | ||||||||| || |||||||| || ||| ||||
Sbjct: 1109 acccggatcttctcctacgctgatagtcagagacaccgtcttggaccaaactatctgcaa 1168
Query: 688 cttccagtcaatgctcccaaatgtgctcaccacaacaatcaccatgaaggttttatgaac 747
|| || || ||||| || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1169 ctacctgttaatgcccctaaatgtgctcaccacaacaatcaccatgatggttttatgaac 1228
Query: 748 ttcatgcacagagatgaggagatcaattactacccctcaaagtttgatcc 797
||||||||||| ||||||||| ||||||||| ||| |||| ||| |||||
Sbjct: 1229 ttcatgcacagggatgaggaggtcaattacttcccttcaaggttggatcc 1278
Score = 89.7 bits (45), Expect = 6e-17
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 964 tcggagccacgtctcacccacgagatccgcggcatctggatctcttactggtctcaggct 1023
|||||||| ||| |||| ||||| |||||| |||| |||||||||||||||||||||||
Sbjct: 1445 tcggagcctcgtgtcacgcacgaaatccgcagcatttggatctcttactggtctcaggca 1504
Query: 1024 gatcgatccttgggacagaaacttgcaagccgtctgaacgtgaggccaa 1072
|| ||| ||||||||||||| |||| ||||| |||||||||||||
Sbjct: 1505 gacaaatctctgggacagaaactagcaactcgtcttaacgtgaggccaa 1553
Score = 58.0 bits (29), Expect = 2e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 243 caaatctggaaaagttctctttgtgaagttccactggaaaccaacttgtgggatcaa 299
|||| ||||||||| || || |||||| ||||||||||| || ||||||||||||||
Sbjct: 724 caaagctggaaaagctcactatgtgaaattccactggaagccgacttgtgggatcaa 780
Score = 40.1 bits (20), Expect = 0.047
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 1 gatcttgttgggaacaacactccggtgttcttcatccgtgatgg 44
|||||||||||||||||| || || |||||| ||||||||||
Sbjct: 482 gatcttgttgggaacaacttccctgtattcttcgtccgtgatgg 525
>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P25819,
GI:17865693 from [Arabidopsis thaliana]
Length = 1856
Score = 115 bits (58), Expect = 1e-24
Identities = 139/166 (83%)
Strand = Plus / Plus
Query: 383 ctggcaactaccccgagtggaaacttttcatccagaccatggatcctgcagatgaggata 442
|||| |||||||| || ||||| || || ||||| | ||| |||||||| ||||| || |
Sbjct: 854 ctggaaactaccctgaatggaagctctttatccaaatcattgatcctgctgatgaagaca 913
Query: 443 agtttgactttgacccacttgatgtgaccaagatctggcctgaggatattttgcctctgc 502
|||| ||||||||||| || ||||||||||||| ||||||||||||||| |||||||| |
Sbjct: 914 agttcgactttgacccgctcgatgtgaccaagacctggcctgaggatatcttgcctcttc 973
Query: 503 aaccggttggtcgcttggttctgaacaggaccattgacaatttctt 548
|||| ||||| || |||| |||||| || ||||||||| |||||
Sbjct: 974 aacctgttggacgtatggtgttgaacaagaacattgacaacttctt 1019
Score = 111 bits (56), Expect = 2e-23
Identities = 83/92 (90%)
Strand = Plus / Plus
Query: 988 atccgcggcatctggatctcttactggtctcaggctgatcgatccttgggacagaaactt 1047
|||||| | |||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct: 1459 atccgcagtatctggatctcttactggtctcaggctgataagtctttgggacagaagctg 1518
Query: 1048 gcaagccgtctgaacgtgaggccaagcatcta 1079
|||||||||||||||||||| |||||||||||
Sbjct: 1519 gcaagccgtctgaacgtgagaccaagcatcta 1550
Score = 105 bits (53), Expect = 1e-21
Identities = 101/117 (86%)
Strand = Plus / Plus
Query: 652 actcagagacatcgccttggaccgaattatttgcagcttccagtcaatgctcccaaatgt 711
||||||||||| || |||||||| || || | ||||| |||||||||||||| ||||||
Sbjct: 1123 actcagagacaccgtcttggaccaaactaccttcagctgccagtcaatgctccaaaatgt 1182
Query: 712 gctcaccacaacaatcaccatgaaggttttatgaacttcatgcacagagatgaggag 768
|||||||||||||| |||||||| || || ||||| ||||||||||| || ||||||
Sbjct: 1183 gctcaccacaacaaccaccatgagggattcatgaatttcatgcacagggacgaggag 1239
Score = 60.0 bits (30), Expect = 5e-08
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 172 gatgatgttggtattccacaagattacaggcacatggagggtttcggtgtccacacctac 231
|||||| | ||||| ||||||||||||||||||||||| |||| |||||| | || |||
Sbjct: 643 gatgatatcggtatcccacaagattacaggcacatggatggttcaggtgtcaatacatac 702
Query: 232 actcttattgccaaatctggaaaagttctctttgtgaagttccactggaaaccaacttgt 291
| | || |||| |||| |||| || || ||||||||||| |||||||||||||||
Sbjct: 703 atgttgatcaacaaagctggcaaagctcactacgtgaagttccattggaaaccaacttgt 762
Query: 292 gg 293
||
Sbjct: 763 gg 764
Score = 50.1 bits (25), Expect = 5e-05
Identities = 91/113 (80%)
Strand = Plus / Plus
Query: 1 gatcttgttgggaacaacactccggtgttcttcatccgtgatgggattcagttcccggat 60
||||||||||| |||||| ||| || ||||||||||| |||||||| ||||||| ||
Sbjct: 472 gatcttgttggaaacaactttcctgttttcttcatccgcgatgggatgaagttccctgac 531
Query: 61 gttgtccacgcgttgaaacctaacccgaaaacaaacatccaagagtactggag 113
| |||||||| | || || ||||| ||| | ||||||||||| |||||||
Sbjct: 532 atggtccacgctcttaagccgaacccaaaatctcacatccaagagaactggag 584
Score = 38.2 bits (19), Expect = 0.19
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 869 agaaagagaacaacttcaa 887
|||||||||||||||||||
Sbjct: 1340 agaaagagaacaacttcaa 1358
>At5g56460.1 68418.m07047 protein kinase, putative contains protein kinase domain,
Pfam:PF00069
Length = 1756
Score = 44.1 bits (22), Expect = 0.003
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1315 aagattaaaaaaaaaaaaaaaa 1336
||||||||||||||||||||||
Sbjct: 1668 aagattaaaaaaaaaaaaaaaa 1647
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 54,419
Number of Sequences: 29161
Number of extensions: 54419
Number of successful extensions: 3539
Number of sequences better than 10.0: 112
length of query: 1336
length of database: 44,058,232
effective HSP length: 18
effective length of query: 1318
effective length of database: 43,533,334
effective search space: 57376934212
effective search space used: 57376934212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)