BLASTX 1.5.4-Paracel [2003-06-05]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CD532626.r
(138 letters)
Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
1,895,298 sequences; 629,712,918 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196968.2| protein kinase family protein [Arabidopsis... 34 0.99
pir||T48637 protein kinase MSK-3-like - Arabidopsis thalian... 34 0.99
>ref|NP_196968.2| protein kinase family protein [Arabidopsis
thaliana]|gi|46576619|sp|Q8VZD5|KSG5_ARATH
Shaggy-related protein kinase epsilon
(ASK-epsilon)|gi|18086450|gb|AAL57679.1|
AT5g14640/T15N1_130 [Arabidopsis
thaliana]|gi|34365555|gb|AAQ65089.1|
At5g14640/T15N1_130 [Arabidopsis thaliana]
Length = 410
Score = 33.9 bits (76), Expect = 0.99
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2
Query: 50 VGTLPASSMATKQSNA 3
VGTLPASSMATKQSNA
Sbjct: 4 VGTLPASSMATKQSNA 19
>pir||T48637 protein kinase MSK-3-like - Arabidopsis
thaliana|gi|7573313|emb|CAB87631.1| protein kinase
MSK-3-like [Arabidopsis thaliana]
Length = 408
Score = 33.9 bits (76), Expect = 0.99
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2
Query: 50 VGTLPASSMATKQSNA 3
VGTLPASSMATKQSNA
Sbjct: 4 VGTLPASSMATKQSNA 19
Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
Posted date: Jul 5, 2004 10:54 PM
Number of letters in database: 629,712,918
Number of sequences in database: 1,895,298
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 21
effective length of database: 589,911,660
effective search space used: 14157879840
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)