BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Z17579.r
(428 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g46660.1 68416.m05065 UDP-glucoronosyl/UDP-glucosyl tran... 773 0.0
At3g46670.1 68416.m05066 UDP-glucoronosyl/UDP-glucosyl tran... 375 e-103
At5g38040.1 68418.m04584 UDP-glucoronosyl/UDP-glucosyl tran... 159 2e-38
At5g38010.1 68418.m04578 UDP-glucoronosyl/UDP-glucosyl tran... 133 1e-30
At3g46700.1 68416.m05070 UDP-glucoronosyl/UDP-glucosyl tran... 58 6e-08
>At3g46660.1 68416.m05065 UDP-glucoronosyl/UDP-glucosyl transferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 1824
Score = 773 bits (390), Expect = 0.0
Identities = 411/418 (98%)
Strand = Plus / Plus
Query: 11 tcggccaaggagttccaatgatctgcaggccttttgcgggtgatcaaaggatgaacgcta 70
||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||||
Sbjct: 1402 tcggccaaggagttccaatgatctgcaggccattttcgggtgatcaaaaggtgaacgcta 1461
Query: 71 gatacttggagtgtgtatggaaaattgggattcaagtggagggtgagctagagagaggag 130
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1462 gatacttggagtgtgtatggaaaattgggattcaagtggagggtgagctagacagaggag 1521
Query: 131 tggtcgagagagctgtgaagaggttaatggttgaacaagaaggagaggagatgaggaaga 190
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1522 tggtcgagagagctgtgaagaggttaatggttgacgaagaaggagaggagatgaggaaga 1581
Query: 191 gagctttcagtttaaaagagcaacttagagcctctgttaaaagtggaggctcttcacaca 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1582 gagctttcagtttaaaagagcaacttagagcctctgttaaaagtggaggctcttcacaca 1641
Query: 251 actcgctagaagagtttgtacacttcataaggactctatgaagacagttgtgtctactaa 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1642 actcgctagaagagtttgtacacttcataaggactctatgaagacagttgtgtctactaa 1701
Query: 311 aacacacaaagcatcaagattcctttttcaaccattccaagtttgtttgcatagagttta 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1702 aacacacaaagcatcaagattcctttttcaaccattccaagtttgtttgcatagagttta 1761
Query: 371 tctgaacatcacttaaaaactcacctgcagaataacaaactataaaaattaatacttt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1762 tctgaacatcacttaaaaactcacctgcagaataacaaactataaaaattaatacttt 1819
>At3g46670.1 68416.m05066 UDP-glucoronosyl/UDP-glucosyl transferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 1732
Score = 375 bits (189), Expect = e-103
Identities = 301/337 (89%), Gaps = 1/337 (0%)
Strand = Plus / Plus
Query: 17 aaggagttccaatgatctgcaggccttttgcgggtgatcaaaggatgaacgctagatact 76
|||||||||||||||| |||| ||| ||| | ||||||||| | |||| || |||||||
Sbjct: 1252 aaggagttccaatgatttgcaagccgttttccagtgatcaaatggtgaatgcgagatact 1311
Query: 77 tggagtgtgtatggaaaattgggattcaagtggagggtgagctagagagaggagtggtcg 136
||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||||
Sbjct: 1312 tggagtgtgtatggaaaattgggattcaagttgagggtgatctagacagaggagcggtcg 1371
Query: 137 agagagctgtgaagaggttaatggttgaacaagaaggagaggagatgaggaagagagctt 196
|||||||||||| |||||||||||| || ||||||| |||| ||||||||||||||||
Sbjct: 1372 agagagctgtgaggaggttaatggtggaggaagaaggggaggggatgaggaagagagcta 1431
Query: 197 tcagtttaaaagagcaacttagagcctctgttaaaagtggaggctcttcacacaactcgc 256
||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 1432 tcagtttgaaagagcaacttagagcctctgttataagtggaggttcttcacacaactcgc 1491
Query: 257 tagaagagtttgtacacttcataaggactctatgaagacagttgtgtctactaaaacaca 316
|||| ||||||||||||| ||| |||||||||||||||| |||| | |||||||||||
Sbjct: 1492 tagaggagtttgtacactacatgaggactctatgaagacttttgtctttactaaaacac- 1550
Query: 317 caaagcatcaagattcctttttcaaccattccaagtt 353
|||| | ||||||||||| ||||||| ||||||||||
Sbjct: 1551 caaaacttcaagattcctctttcaactattccaagtt 1587
>At5g38040.1 68418.m04584 UDP-glucoronosyl/UDP-glucosyl transferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 1350
Score = 159 bits (80), Expect = 2e-38
Identities = 179/212 (84%)
Strand = Plus / Plus
Query: 17 aaggagttccaatgatctgcaggccttttgcgggtgatcaaaggatgaacgctagatact 76
||||||||||| |||| || ||||||||| | |||||||| | ||| || || ||||
Sbjct: 1085 aaggagttccattgatatgtaggccttttactactgatcaaaaggggaatgcaaggtact 1144
Query: 77 tggagtgtgtatggaaaattgggattcaagtggagggtgagctagagagaggagtggtcg 136
|||||||||| |||||| | || ||||||||||||||||||||||||||||| | |||
Sbjct: 1145 tggagtgtgtgtggaaagtaggaattcaagtggagggtgagctagagagaggcgcaatcg 1204
Query: 137 agagagctgtgaagaggttaatggttgaacaagaaggagaggagatgaggaagagagctt 196
||||||||||||||||||||||||| || |||||||||| ||||||| || ||||||
Sbjct: 1205 agagagctgtgaagaggttaatggtggatgaagaaggagaagagatgaagagaagagctc 1264
Query: 197 tcagtttaaaagagcaacttagagcctctgtt 228
| |||||||||||| |||| | ||||||||||
Sbjct: 1265 taagtttaaaagagaaactcaaagcctctgtt 1296
>At5g38010.1 68418.m04578 UDP-glucoronosyl/UDP-glucosyl transferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 1362
Score = 133 bits (67), Expect = 1e-30
Identities = 121/139 (87%)
Strand = Plus / Plus
Query: 77 tggagtgtgtatggaaaattgggattcaagtggagggtgagctagagagaggagtggtcg 136
|||||||||| |||| | ||||| |||||||||||||||| ||| |||||||||| ||||
Sbjct: 1157 tggagtgtgtctggagagttggggttcaagtggagggtgaactaaagagaggagtagtcg 1216
Query: 137 agagagctgtgaagaggttaatggttgaacaagaaggagaggagatgaggaagagagctt 196
|||||||||||||||||||| |||| || |||||||||| ||||||| | |||||||
Sbjct: 1217 agagagctgtgaagaggttactggtggatgaagaaggagaagagatgaagttgagagctc 1276
Query: 197 tcagtttaaaagagcaact 215
||||||| |||||| ||||
Sbjct: 1277 tcagtttgaaagagaaact 1295
>At3g46700.1 68416.m05070 UDP-glucoronosyl/UDP-glucosyl transferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 1158
Score = 58.0 bits (29), Expect = 6e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 83 gtgtatggaaaattgggattcaagtggagggtgagctagagagaggagtggtcgagagag 142
||||||||| ||| |||||||| || | ||||| || || ||||||| ||||||||||
Sbjct: 950 gtgtatggagaatagggattcaggtaggaggtgaactggaaagaggagccgtcgagagag 1009
Query: 143 ctgtgaagaggtt 155
|||||||||||||
Sbjct: 1010 ctgtgaagaggtt 1022
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 17 aaggagttccaatgatctgcaggcctt 43
|||||||||||||||| ||||||||||
Sbjct: 884 aaggagttccaatgatttgcaggcctt 910
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,335
Number of Sequences: 29161
Number of extensions: 15335
Number of successful extensions: 1304
Number of sequences better than 10.0: 44
length of query: 428
length of database: 44,058,232
effective HSP length: 17
effective length of query: 411
effective length of database: 43,562,495
effective search space: 17904185445
effective search space used: 17904185445
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)