BLASTX 1.5.4-Paracel [2003-06-05]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BX834940.r
         (1112 letters)

Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr 
           1,895,298 sequences; 629,712,918 total letters

Searching...................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL31200.1|  At1g25170/F4F7_2 [Arabidopsis thaliana]|gi|2...   118   2e-25
ref|NP_173882.1|  expressed protein [Arabidopsis thaliana]|g...   112   2e-23
pir||B86381  probable anthranilate synthase beta subunit [im...   101   8e-26
ref|NP_173876.1|  expressed protein [Arabidopsis thaliana]|g...   101   8e-26

>gb|AAL31200.1| At1g25170/F4F7_2 [Arabidopsis thaliana]|gi|21928111|gb|AAM78084.1|
           At1g25170/F4F7_2 [Arabidopsis thaliana]
          Length = 109

 Score =  118 bits (296), Expect = 2e-25
 Identities = 62/94 (65%), Positives = 70/94 (73%), Gaps = 2/94 (2%)
 Frame = +3

Query: 147 NLQHMDLPIEVEGLYRVDNRVSQDSNTWRNTSSPATCEGAINVDNVRIATGLYRFYDDGD 326
           NLQHMDLPIEVEGLYRVDNR +QDSNTWRNTS+P+TC+ AIN  NVRIATGLYRF DDGD
Sbjct: 12  NLQHMDLPIEVEGLYRVDNRFNQDSNTWRNTSAPSTCKNAINFYNVRIATGLYRFDDDGD 71

Query: 327 IFMDR*SSRRVGSFQKNRE--EQRWGGTYFFAHY 422
           I MD   +   G +   R+    R GG   FAH+
Sbjct: 72  IVMD---AEVQGGWVLCRKTVRNRGGGVLTFAHF 102



>ref|NP_173882.1| expressed protein [Arabidopsis thaliana]|gi|25403262|pir||F86380
           protein F5A9.10 [imported] - Arabidopsis
           thaliana|gi|9945074|gb|AAG03111.1| F5A9.10 [Arabidopsis
           thaliana]
          Length = 149

 Score =  112 bits (279), Expect = 2e-23
 Identities = 60/93 (64%), Positives = 68/93 (72%), Gaps = 2/93 (2%)
 Frame = +3

Query: 165 LPIEVEGLYRVDNRVSQDSNTWRNTSSPATCEGAINVDNVRIATGLYRFYDDGDIFMDR* 344
           +PIEVEGLYRVDNR +QDSNTWRNTS+P+TC+ AIN  NVRIATGLYRF DDGDI MD  
Sbjct: 60  IPIEVEGLYRVDNRFNQDSNTWRNTSAPSTCKNAINFYNVRIATGLYRFDDDGDIVMD-- 117

Query: 345 SSRRVGSFQKNRE--EQRWGGTYFFAHYMLVLV 437
            +   G +   R+    R GG   FAHYM VLV
Sbjct: 118 -AEVQGGWVLCRKTVRNRGGGVLTFAHYMWVLV 149



>pir||B86381 probable anthranilate synthase beta subunit [imported] -
           Arabidopsis thaliana
          Length = 469

 Score =  101 bits (252), Expect(2) = 8e-26
 Identities = 47/58 (81%), Positives = 52/58 (89%)
 Frame = +3

Query: 165 LPIEVEGLYRVDNRVSQDSNTWRNTSSPATCEGAINVDNVRIATGLYRFYDDGDIFMD 338
           +PIEVEGLYRVDNR +QDSNTWRNTS+P+TC+ AIN  NVRIATGLYRF DDGDI MD
Sbjct: 60  IPIEVEGLYRVDNRFNQDSNTWRNTSAPSTCKNAINFYNVRIATGLYRFDDDGDIVMD 117




 Score = 39.3 bits (90), Expect(2) = 8e-26
 Identities = 18/24 (75%), Positives = 19/24 (79%)
 Frame = +1

Query: 322 GTFLWIAEVQGGWVLFRKTVRNRG 393
           G  +  AEVQGGWVL RKTVRNRG
Sbjct: 112 GDIVMDAEVQGGWVLCRKTVRNRG 135



>ref|NP_173876.1| expressed protein [Arabidopsis
           thaliana]|gi|15221856|ref|NP_173886.1| expressed protein
           [Arabidopsis thaliana]|gi|15221865|ref|NP_173890.1|
           expressed protein [Arabidopsis
           thaliana]|gi|25372811|pir||H86380 protein F5A9.6
           [imported] - Arabidopsis
           thaliana|gi|9945070|gb|AAG03107.1| F5A9.2 [Arabidopsis
           thaliana]|gi|9945072|gb|AAG03109.1| F5A9.6 [Arabidopsis
           thaliana]|gi|9945078|gb|AAG03115.1| F5A9.16 [Arabidopsis
           thaliana]|gi|11761478|gb|AAG40090.1| unknown protein
           [Arabidopsis thaliana]
          Length = 216

 Score =  101 bits (252), Expect(2) = 8e-26
 Identities = 47/58 (81%), Positives = 52/58 (89%)
 Frame = +3

Query: 165 LPIEVEGLYRVDNRVSQDSNTWRNTSSPATCEGAINVDNVRIATGLYRFYDDGDIFMD 338
           +PIEVEGLYRVDNR +QDSNTWRNTS+P+TC+ AIN  NVRIATGLYRF DDGDI MD
Sbjct: 60  IPIEVEGLYRVDNRFNQDSNTWRNTSAPSTCKNAINFYNVRIATGLYRFDDDGDIVMD 117




 Score = 39.3 bits (90), Expect(2) = 8e-26
 Identities = 18/24 (75%), Positives = 19/24 (79%)
 Frame = +1

Query: 322 GTFLWIAEVQGGWVLFRKTVRNRG 393
           G  +  AEVQGGWVL RKTVRNRG
Sbjct: 112 GDIVMDAEVQGGWVLCRKTVRNRG 135



  Database: BlastDB/NCBI/blast/db/FASTA/2004_07_04_01_00_0/nr
    Posted date:  Jul 5, 2004 10:54 PM
  Number of letters in database: 629,712,918
  Number of sequences in database:  1,895,298
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 629,712,918
effective HSP length: 127
effective length of database: 389,010,072
effective search space used: 94529447496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)