BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.11.cl.1130.Contig1
(2269 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g38131.1 68414.m04669 expressed protein contains Pfam PF... 4494 0.0
At1g38065.1 68414.m04668 expressed protein contains Pfam PF... 3287 0.0
At2g01480.1 68415.m00071 expressed protein contains Pfam PF... 56 1e-06
At1g14970.1 68414.m01788 expressed protein contains Pfam PF... 56 1e-06
At1g35510.1 68414.m04407 expressed protein contains Pfam PF... 44 0.005
>At1g38131.1 68414.m04669 expressed protein contains Pfam PF03138: Plant protein
family. The function of this family of plant proteins is
unknown; previously annotated as 'growth regulator
-related' based on similarity to axi 1 protein
(GB:X80301) (GI:559920) from [Nicotiana tabacum], which,
due to scienitific fraud was retracted. Retraction in:
Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497.
Length = 2269
Score = 4494 bits (2267), Expect = 0.0
Identities = 2267/2267 (100%)
Strand = Plus / Plus
Query: 3 aaaagaacttcgtcaatgttactgaaagttttcacagatccatcgtctccatgagatctc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aaaagaacttcgtcaatgttactgaaagttttcacagatccatcgtctccatgagatctc 62
Query: 63 tgtgaataacattacttctctttctcaaactcagactctcaataacacaaaaacccagat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgtgaataacattacttctctttctcaaactcagactctcaataacacaaaaacccagat 122
Query: 123 ctttctctctcttcaccacaaaaaaaaatcgaaactttatttttgcttgatgaagagcaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctttctctctcttcaccacaaaaaaaaatcgaaactttatttttgcttgatgaagagcaa 182
Query: 183 aatccaccaccagcccaatggtagcaacaatggtgttgtttcaagtaacgataatggctg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aatccaccaccagcccaatggtagcaacaatggtgttgtttcaagtaacgataatggctg 242
Query: 243 ccgaagtgagtctccaagcccacctttatctccaaaccgccgtgtcctccgtcgtcaacg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ccgaagtgagtctccaagcccacctttatctccaaaccgccgtgtcctccgtcgtcaacg 302
Query: 303 gcggcaaactttactcagagcttcttctttctctctccggagaaatcttcgttacttgct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gcggcaaactttactcagagcttcttctttctctctccggagaaatcttcgttacttgct 362
Query: 363 tctccttcctatgatttacgcttctgggcttctcatgtgtgttggtcctttctctggtct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tctccttcctatgatttacgcttctgggcttctcatgtgtgttggtcctttctctggtct 422
Query: 423 tgtcggatgggtttatgttcccggttctgtttatcggagccccgagatttaccggaaact 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tgtcggatgggtttatgttcccggttctgtttatcggagccccgagatttaccggaaact 482
Query: 483 taaagatgacattttctccgacaattcaaccgcccttgagttgtcttctgtctggaaatt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 taaagatgacattttctccgacaattcaaccgcccttgagttgtcttctgtctggaaatt 542
Query: 543 caaaagaagaccaaagatgccaaaaccttgtcctaattcaacagtttcatcacattttgg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 caaaagaagaccaaagatgccaaaaccttgtcctaattcaacagtttcatcacattttgg 602
Query: 603 tctgaacagagaatcatctgctcttgctcctagtagtggttacttaatcgtggaagcaaa 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tctgaacagagaatcatctgctcttgctcctagtagtggttacttaatcgtggaagcaaa 662
Query: 663 tggcggtcttaatcagcagcgttctgcgatttgcaatgctgtggctgtagccgggcttct 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tggcggtcttaatcagcagcgttctgcgatttgcaatgctgtggctgtagccgggcttct 722
Query: 723 taacgcagttttagtcataccgcggtttgagtttcacgctatttggaaggattcaagcaa 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 taacgcagttttagtcataccgcggtttgagtttcacgctatttggaaggattcaagcaa 782
Query: 783 ctttggtgatatctatgacgaagatcacttcatatcaagccttgaaggttatgtgaaaat 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 ctttggtgatatctatgacgaagatcacttcatatcaagccttgaaggttatgtgaaaat 842
Query: 843 agtgagagatgttcctgatgagataatgactcgttttagttacaatgtttcaagtattcc 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 agtgagagatgttcctgatgagataatgactcgttttagttacaatgtttcaagtattcc 902
Query: 903 tactattcgtgttcaagcttgggctactgtgaactactataacggggaagtttatccggt 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 tactattcgtgttcaagcttgggctactgtgaactactataacggggaagtttatccggt 962
Query: 963 tttaaaggaacatggggttattcggataactcctttcgcaaatagattggcgatgagtgt 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 tttaaaggaacatggggttattcggataactcctttcgcaaatagattggcgatgagtgt 1022
Query: 1023 tccaccgtatatacaacttttgaggtgcatagctaattacaaagcattgaagttttcttc 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 tccaccgtatatacaacttttgaggtgcatagctaattacaaagcattgaagttttcttc 1082
Query: 1083 acctatatcaacactagctgagaagttagtcgatcggatggttgagaaaagctcggcgac 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 acctatatcaacactagctgagaagttagtcgatcggatggttgagaaaagctcggcgac 1142
Query: 1143 cggaggaaagtatgtctcggtccaccttcgatttgaggaggacatggtggcattctcatg 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 cggaggaaagtatgtctcggtccaccttcgatttgaggaggacatggtggcattctcatg 1202
Query: 1203 ttgtctctacgaaggtggaagagctgagaaatctgaaatggatgtgattagacagaaaag 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 ttgtctctacgaaggtggaagagctgagaaatctgaaatggatgtgattagacagaaaag 1262
Query: 1263 ttggaaaggaaagttcaaacgaagagatcgtgtcattaggcccgaccttaaccgagttaa 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 ttggaaaggaaagttcaaacgaagagatcgtgtcattaggcccgaccttaaccgagttaa 1322
Query: 1323 cggaaaatgtccccttaccccattagaggtcggtatgatgctccgtggtatgggatttga 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 cggaaaatgtccccttaccccattagaggtcggtatgatgctccgtggtatgggatttga 1382
Query: 1383 taacaacacttcgatatatttggcctcgggaagaatctaccaacctgagaaacatttggc 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 taacaacacttcgatatatttggcctcgggaagaatctaccaacctgagaaacatttggc 1442
Query: 1443 tcctcttcaagaaatgtttcctcgtctctacacaaaagagtctcttgcaactccagagga 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 tcctcttcaagaaatgtttcctcgtctctacacaaaagagtctcttgcaactccagagga 1502
Query: 1503 gcttgccccatttcagggatattcctccagaatggctgctttggactacacagtgagttt 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 gcttgccccatttcagggatattcctccagaatggctgctttggactacacagtgagttt 1562
Query: 1563 gctaagtgaagtctttgtgacaactcaaggtggaaactttcctcattttttgatgggcca 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 gctaagtgaagtctttgtgacaactcaaggtggaaactttcctcattttttgatgggcca 1622
Query: 1623 tcgaagattcctcttcggtggacatgcaaaaactgtcatacccgacaaacccaaactcgt 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 tcgaagattcctcttcggtggacatgcaaaaactgtcatacccgacaaacccaaactcgt 1682
Query: 1683 tctccttcttcaggacatggaaatgaggtgggaagttttcaaaaaggagatgaaactgat 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 tctccttcttcaggacatggaaatgaggtgggaagttttcaaaaaggagatgaaactgat 1742
Query: 1743 gctaggggaaagcgatagaaagggagtgatggtaccgagagtcaggaagatcaaccggaa 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1743 gctaggggaaagcgatagaaagggagtgatggtaccgagagtcaggaagatcaaccggaa 1802
Query: 1803 aacttcgatttacacatacccgttacccgaatgcgaatgcatcttccatttgtcttccaa 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1803 aacttcgatttacacatacccgttacccgaatgcgaatgcatcttccatttgtcttccaa 1862
Query: 1863 tttttcaaacaccggaaacattttgagccttggagctcttcatccatcttccaacctcat 1922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1863 tttttcaaacaccggaaacattttgagccttggagctcttcatccatcttccaacctcat 1922
Query: 1923 aagttctgcaagactatagtccctgagtcattttgacccttacactgaagctctgagcca 1982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1923 aagttctgcaagactatagtccctgagtcattttgacccttacactgaagctctgagcca 1982
Query: 1983 agtcctgaatgtttttttgctcttgacggaagcgaggaatcagatattcttacgaggaga 2042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1983 agtcctgaatgtttttttgctcttgacggaagcgaggaatcagatattcttacgaggaga 2042
Query: 2043 ttgagttcacataagtgtaagaactctctaggattgaaagctgtgttgcttgctacttct 2102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2043 ttgagttcacataagtgtaagaactctctaggattgaaagctgtgttgcttgctacttct 2102
Query: 2103 ggttaggagttaggacagtcacaaaaacaggggtgtgattttctgtacttatgttgttat 2162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2103 ggttaggagttaggacagtcacaaaaacaggggtgtgattttctgtacttatgttgttat 2162
Query: 2163 cttttttgtgcattacttacgttgtcactcaaattgttcaagtgtatagaaattttacat 2222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2163 cttttttgtgcattacttacgttgtcactcaaattgttcaagtgtatagaaattttacat 2222
Query: 2223 cgttctggtgggattttttttgaaaaaaattcattgtaatattccct 2269
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2223 cgttctggtgggattttttttgaaaaaaattcattgtaatattccct 2269
>At1g38065.1 68414.m04668 expressed protein contains Pfam PF03138: Plant protein
family. The function of this family of plant proteins is
unknown; previously annotated as 'growth
regulator-related protein' based on similarity to axi 1
protein (GB:X80301) (GI:559920) from [Nicotiana tabacum],
which, due to scienitific fraud was retracted. Retraction
in: Schell J. EMBO J 1999 May 17;18(10):2908.
PMID:10400497.
Length = 1741
Score = 3287 bits (1658), Expect = 0.0
Identities = 1658/1658 (100%)
Strand = Plus / Plus
Query: 612 agaatcatctgctcttgctcctagtagtggttacttaatcgtggaagcaaatggcggtct 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 agaatcatctgctcttgctcctagtagtggttacttaatcgtggaagcaaatggcggtct 143
Query: 672 taatcagcagcgttctgcgatttgcaatgctgtggctgtagccgggcttcttaacgcagt 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 taatcagcagcgttctgcgatttgcaatgctgtggctgtagccgggcttcttaacgcagt 203
Query: 732 tttagtcataccgcggtttgagtttcacgctatttggaaggattcaagcaactttggtga 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tttagtcataccgcggtttgagtttcacgctatttggaaggattcaagcaactttggtga 263
Query: 792 tatctatgacgaagatcacttcatatcaagccttgaaggttatgtgaaaatagtgagaga 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatctatgacgaagatcacttcatatcaagccttgaaggttatgtgaaaatagtgagaga 323
Query: 852 tgttcctgatgagataatgactcgttttagttacaatgtttcaagtattcctactattcg 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgttcctgatgagataatgactcgttttagttacaatgtttcaagtattcctactattcg 383
Query: 912 tgttcaagcttgggctactgtgaactactataacggggaagtttatccggttttaaagga 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgttcaagcttgggctactgtgaactactataacggggaagtttatccggttttaaagga 443
Query: 972 acatggggttattcggataactcctttcgcaaatagattggcgatgagtgttccaccgta 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acatggggttattcggataactcctttcgcaaatagattggcgatgagtgttccaccgta 503
Query: 1032 tatacaacttttgaggtgcatagctaattacaaagcattgaagttttcttcacctatatc 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tatacaacttttgaggtgcatagctaattacaaagcattgaagttttcttcacctatatc 563
Query: 1092 aacactagctgagaagttagtcgatcggatggttgagaaaagctcggcgaccggaggaaa 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aacactagctgagaagttagtcgatcggatggttgagaaaagctcggcgaccggaggaaa 623
Query: 1152 gtatgtctcggtccaccttcgatttgaggaggacatggtggcattctcatgttgtctcta 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtatgtctcggtccaccttcgatttgaggaggacatggtggcattctcatgttgtctcta 683
Query: 1212 cgaaggtggaagagctgagaaatctgaaatggatgtgattagacagaaaagttggaaagg 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cgaaggtggaagagctgagaaatctgaaatggatgtgattagacagaaaagttggaaagg 743
Query: 1272 aaagttcaaacgaagagatcgtgtcattaggcccgaccttaaccgagttaacggaaaatg 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaagttcaaacgaagagatcgtgtcattaggcccgaccttaaccgagttaacggaaaatg 803
Query: 1332 tccccttaccccattagaggtcggtatgatgctccgtggtatgggatttgataacaacac 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tccccttaccccattagaggtcggtatgatgctccgtggtatgggatttgataacaacac 863
Query: 1392 ttcgatatatttggcctcgggaagaatctaccaacctgagaaacatttggctcctcttca 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ttcgatatatttggcctcgggaagaatctaccaacctgagaaacatttggctcctcttca 923
Query: 1452 agaaatgtttcctcgtctctacacaaaagagtctcttgcaactccagaggagcttgcccc 1511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 agaaatgtttcctcgtctctacacaaaagagtctcttgcaactccagaggagcttgcccc 983
Query: 1512 atttcagggatattcctccagaatggctgctttggactacacagtgagtttgctaagtga 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 atttcagggatattcctccagaatggctgctttggactacacagtgagtttgctaagtga 1043
Query: 1572 agtctttgtgacaactcaaggtggaaactttcctcattttttgatgggccatcgaagatt 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 agtctttgtgacaactcaaggtggaaactttcctcattttttgatgggccatcgaagatt 1103
Query: 1632 cctcttcggtggacatgcaaaaactgtcatacccgacaaacccaaactcgttctccttct 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1104 cctcttcggtggacatgcaaaaactgtcatacccgacaaacccaaactcgttctccttct 1163
Query: 1692 tcaggacatggaaatgaggtgggaagttttcaaaaaggagatgaaactgatgctagggga 1751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164 tcaggacatggaaatgaggtgggaagttttcaaaaaggagatgaaactgatgctagggga 1223
Query: 1752 aagcgatagaaagggagtgatggtaccgagagtcaggaagatcaaccggaaaacttcgat 1811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 aagcgatagaaagggagtgatggtaccgagagtcaggaagatcaaccggaaaacttcgat 1283
Query: 1812 ttacacatacccgttacccgaatgcgaatgcatcttccatttgtcttccaatttttcaaa 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 ttacacatacccgttacccgaatgcgaatgcatcttccatttgtcttccaatttttcaaa 1343
Query: 1872 caccggaaacattttgagccttggagctcttcatccatcttccaacctcataagttctgc 1931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1344 caccggaaacattttgagccttggagctcttcatccatcttccaacctcataagttctgc 1403
Query: 1932 aagactatagtccctgagtcattttgacccttacactgaagctctgagccaagtcctgaa 1991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 aagactatagtccctgagtcattttgacccttacactgaagctctgagccaagtcctgaa 1463
Query: 1992 tgtttttttgctcttgacggaagcgaggaatcagatattcttacgaggagattgagttca 2051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 tgtttttttgctcttgacggaagcgaggaatcagatattcttacgaggagattgagttca 1523
Query: 2052 cataagtgtaagaactctctaggattgaaagctgtgttgcttgctacttctggttaggag 2111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 cataagtgtaagaactctctaggattgaaagctgtgttgcttgctacttctggttaggag 1583
Query: 2112 ttaggacagtcacaaaaacaggggtgtgattttctgtacttatgttgttatcttttttgt 2171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 ttaggacagtcacaaaaacaggggtgtgattttctgtacttatgttgttatcttttttgt 1643
Query: 2172 gcattacttacgttgtcactcaaattgttcaagtgtatagaaattttacatcgttctggt 2231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 gcattacttacgttgtcactcaaattgttcaagtgtatagaaattttacatcgttctggt 1703
Query: 2232 gggattttttttgaaaaaaattcattgtaatattccct 2269
||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 gggattttttttgaaaaaaattcattgtaatattccct 1741
Score = 109 bits (55), Expect = 1e-22
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 559 atgccaaaaccttgtcctaattcaacagtttcatcacattttggtctgaacagag 613
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgccaaaaccttgtcctaattcaacagtttcatcacattttggtctgaacagag 55
>At2g01480.1 68415.m00071 expressed protein contains Pfam PF03138: Plant protein
family. The function of this family of plant proteins is
unknown; previously annotated as 'axi 1 protein from
Nicotiana tabacum -related' based on similarity to axi 1
protein (GB:X80301) (GI:559920) from [Nicotiana tabacum],
which, due to scienitific fraud was retracted. Retraction
in: Schell J. EMBO J 1999 May 17;18(10):2908.
PMID:10400497.
Length = 2610
Score = 56.0 bits (28), Expect = 1e-06
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1567 agtgaagtctttgtgacaactcaaggtggaaactttcctcattt 1610
||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 1651 agtgaggtatttgtgaccacgcaaggtggaaactttcctcattt 1694
>At1g14970.1 68414.m01788 expressed protein contains Pfam PF03138: Plant protein
family. The function of this family of plant proteins is
unknown; previously annotated as 'auxin-independent
growth promoter -related' based on similarity to axi 1
protein (GB:X80301) (GI:559920) from [Nicotiana tabacum],
which, due to scienitific fraud was retracted. Retraction
in: Schell J. EMBO J 1999 May 17;18(10):2908.
PMID:10400497.
Length = 1689
Score = 56.0 bits (28), Expect = 1e-06
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1567 agtgaagtctttgtgacaactcaaggtggaaactttcctcattt 1610
||||| || ||||||||||| |||||||||||||| ||||||||
Sbjct: 1396 agtgaggtatttgtgacaacacaaggtggaaacttccctcattt 1439
>At1g35510.1 68414.m04407 expressed protein contains Pfam PF03138: Plant protein
family. The function of this family of plant proteins is
unknown; previously annotated as 'growth regulator
protein -related' based on similarity to axi 1 protein
(GB:X80301) (GI:559920) from [Nicotiana tabacum], which,
due to scienitific fraud was retracted. Retraction in:
Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497.
Length = 2302
Score = 44.1 bits (22), Expect = 0.005
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 1567 agtgaagtctttgtgacaactcaaggtggaaactttcctcattttttgat 1616
|||||||| ||||| | ||||||||||||||||| || ||||| |||||
Sbjct: 1729 agtgaagtgtttgtatccactcaaggtggaaacttcccacatttcttgat 1778
Score = 36.2 bits (18), Expect = 1.3
Identities = 27/30 (90%)
Strand = Plus / Plus
Query: 1492 actccagaggagcttgccccatttcaggga 1521
||||||||||||||||| || ||| |||||
Sbjct: 1654 actccagaggagcttgctccgtttaaggga 1683
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 81,945
Number of Sequences: 29161
Number of extensions: 81945
Number of successful extensions: 2001
Number of sequences better than 10.0: 44
length of query: 2269
length of database: 44,058,232
effective HSP length: 18
effective length of query: 2251
effective length of database: 43,533,334
effective search space: 97993534834
effective search space used: 97993534834
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)