BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= PTA.CL.1.cl.145.Contig1
(3539 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g49670.1 68416.m05429 leucine-rich repeat transmembrane ... 5400 0.0
At5g65700.1 68418.m08269 leucine-rich repeat transmembrane ... 511 e-143
At4g20270.1 68417.m02961 leucine-rich repeat transmembrane ... 109 2e-22
At1g75820.1 68414.m08807 CLAVATA1 receptor kinase (CLV1) id... 64 9e-09
At4g29450.1 68417.m04204 leucine-rich repeat protein kinase... 52 3e-05
>At3g49670.1 68416.m05429 leucine-rich repeat transmembrane protein kinase,
putative CLAVATA1 receptor kinase, Arabidopsis thaliana,
EMBL:ATU96879
Length = 3452
Score = 5400 bits (2724), Expect = 0.0
Identities = 2751/2760 (99%)
Strand = Plus / Minus
Query: 777 ctggagctatgtagccgtaggagccggcaattgcggacatacattcagaagtaccggaat 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2760 ctggagctatgtagccgtaggagccggcaattgcggacatacattcagaagtaccggaat 2701
Query: 837 cttggaggaacttggcgagaccaaagtcggcgacatgagcttcgaagttggaatcgagga 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2700 cttggaggaacttggcgagaccaaagtcggcgacatgagcttcgaagttggaatcgagga 2641
Query: 897 ggatgttgttggatttaacatctctatggacgatcaacggggaacaatcatggtggagat 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2640 ggatgttgttggatttaacatctctatggacgatcaacggggaacaatcatggtggagat 2581
Query: 957 agcaaagacccttggctgcttcaagagctatcttataacgtgtgttccaatgtaaatgac 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2580 agcaaagacccttggctgcttcaagagctatcttataacgtgtgttccaatgtaaatgac 2521
Query: 1017 ctcctttctttccatgaagaacctctccaaggctaccattaggcatgtactcgtacacaa 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2520 ctcctttctttccatgaagaacctctccaaggctaccattaggcatgtactcgtacacaa 2461
Query: 1077 ggagattcgtttcgtggttggagcaaaaaccgagcagtctcacgatgtgtctgtgtctga 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2460 ggagattcgtttcgtggttggagcaaaaaccgagcagtctcacgatgtgtctgtgtctga 2401
Query: 1137 ttctacctagcgtctgaatctcggcgttgaacccgtgatcgtgggaagatccatgggaca 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2400 ttctacctagcgtctgaatctcggcgttgaacccgtgatcgtgggaagatccatgggaca 2341
Query: 1197 ttgtagccaatcgtttgaccgcgactaggtcgcctttaggcatagtgcctttgtagacaa 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2340 ttgtagccaatcgtttgaccgcgactaggtcgcctttaggcatagtgcctttgtagacaa 2281
Query: 1257 tcccagcaccgcctttaccgatgatgttgtcttccttgagagagtccaagacatcgtcac 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2280 tcccagcaccgcctttaccgatgatgttgtcttccttgagagagtccaagacatcgtcac 2221
Query: 1317 aagtgaagtctagcctctggaaagcagtcaatctccatgccttggcttcactcgcatttc 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2220 aagtgaagtctagcctctggaaagcagtcaatctccatgccttggcttcactcgcatttc 2161
Query: 1377 gcaaggaccgagctttgattatggccactatagcaaacaccatcgaacaaaagagcaatc 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2160 gcaaggaccgagctttgattatggccactatagcaaacaccatcgaacaaaagagcaatc 2101
Query: 1437 caaggacgagtaacagtttcgtagtagcagataaaggtttgacatgagactggtgagttc 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2100 caaggacgagtaacagtttcgtagtagcagataaaggtttgacatgagactggtgagttc 2041
Query: 1497 ctttgccgcaaggacccaaatacggaccacaaagatgagagttacccacaaacgatgtgt 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2040 ctttgccgcaaggacccaaatacggaccacaaagatgagagttacccacaaacgatgtgt 1981
Query: 1557 aattgaagtaactaaactgtccagtgctgggaactaaaccggagagattgttgtaagaga 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1980 aattgaagtaactaaactgtccagtgctgggaactaaaccggagagattgttgtaagaga 1921
Query: 1617 aatcaaccgatgtcaaactctgcattgatgctatcgtcacaggtatggaaccaacgagat 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1920 aatcaaccgatgtcaaactctgcattgatgctatcgtcacaggtatggaaccaacgagat 1861
Query: 1677 ggtttcttgaaagattcaagtaattcaagatcttcatacctgtgagttcattaggaatat 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1860 ggtttcttgaaagattcaagtaattcaagatcttcatacctgtgagttcattaggaatat 1801
Query: 1737 cacctgagagctcattacggctaagatcaacaaacgttagcagcttacaacgactgatct 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1800 cacctgagagctcattacggctaagatcaacaaacgttagcagcttacaacgactgatct 1741
Query: 1797 ccggtgcgatccgaccggagaacagattgtggctaaaatccaacttagatagctgctgaa 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 ccggtgcgatccgaccggagaacagattgtggctaaaatccaacttagatagctgctgaa 1681
Query: 1857 gcctcccaatctcgggaggaatcgaaccagagaacttgttaccatcaagaagtagttttt 1916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 gcctcccaatctcgggaggaatcgaaccagagaacttgttaccatcaagaagtagttttt 1621
Query: 1917 gaacaccggacaagtttccaatagctgcaggtaatgaaccagagagctggttattagaaa 1976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1620 gaacaccggacaagtttccaatagctgcaggtaatgaaccagagagctggttattagaaa 1561
Query: 1977 gactaatctgaccaaggtcaccagagactcctcctccgcttattggcaactctccggtaa 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 gactaatctgaccaaggtcaccagagactcctcctccgcttattggcaactctccggtaa 1501
Query: 2037 ggtaattgtcttggagctccacttgagataatttaggtaacccgaagagctcctttggaa 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 ggtaattgtcttggagctccacttgagataatttaggtaacccgaagagctcctttggaa 1441
Query: 2097 tcgacccgttaaggaaattctcacccatccggatccgggtcagagactcacatttaccaa 2156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 tcgacccgttaaggaaattctcacccatccggatccgggtcagagactcacatttaccaa 1381
Query: 2157 gcgaatccggtattgaaccaaacaagaagttgccaagagtgattaacgtcattaaccggt 2216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 gcgaatccggtattgaaccaaacaagaagttgccaagagtgattaacgtcattaaccggt 1321
Query: 2217 taccagaacacatattcggcggcagagttccggtgagtttgttcgaagagagatcaagaa 2276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 taccagaacacatattcggcggcagagttccggtgagtttgttcgaagagagatcaagaa 1261
Query: 2277 tcactaatctaccattttcccccaatttctgaggaatactaccagtgaaattgttctccc 2336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 tcactaatctaccattttcccccaatttctgaggaatactaccagtgaaattgttctccc 1201
Query: 2337 aaagctgcaacacttcaagctccggcatttcaccgatgaactcaggtatagcaccgtaga 2396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 aaagctgcaacacttcaagctccggcatttcaccgatgaactcaggtatagcaccgtaga 1141
Query: 2397 gcttattcctgaagagattcaaaagcgttaagttcttcagctgtgaaaaactcgtcggaa 2456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 gcttattcctgaagagattcaaaagcgttaagttcttcagctgtgaaaaactcgtcggaa 1081
Query: 2457 tctcgccggtaaacatattgttagacagatccatcgatttcaagcttgaaatcaatccca 2516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 tctcgccggtaaacatattgttagacagatccatcgatttcaagcttgaaatcaatccca 1021
Query: 2517 gctcttgagttattgtccctgtaaatgcgtttacttgaagaaacaacgtatctagcttct 2576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 gctcttgagttattgtccctgtaaatgcgtttacttgaagaaacaacgtatctagcttct 961
Query: 2577 gaagcttcccaatctccggtggaatctctccggttaaaccacaattagcagcgtcgaacc 2636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 gaagcttcccaatctccggtggaatctctccggttaaaccacaattagcagcgtcgaacc 901
Query: 2637 gaacaagctctgataaatttccaatctccggtggaagaccattttcaaaagcgttgtaat 2696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 gaacaagctctgataaatttccaatctccggtggaagaccattttcaaaagcgttgtaat 841
Query: 2697 atccgatgtaaagttcacgaagagtcgttaggtttccgatctccggagggattttaccgg 2756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 atccgatgtaaagttcacgaagagtcgttaggtttccgatctccggagggattttaccgg 781
Query: 2757 ttagctcgttaccggaaaccgctaagtattcgagaacaggccaggttccgtacgtcgccg 2816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ttagctcgttaccggaaaccgctaagtattcgagaacaggccaggttccgtacgtcgccg 721
Query: 2817 ggattttgccggagaagtaattcccaccgaggtgaagatgacggagctgagtgagattag 2876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ggattttgccggagaagtaattcccaccgaggtgaagatgacggagctgagtgagattag 661
Query: 2877 tgagtgaaaccggtaaatctccggttaaattgttgttgtataagtcaagaacacggagat 2936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tgagtgaaaccggtaaatctccggttaaattgttgttgtataagtcaagaacacggagat 601
Query: 2937 tcaccaatccagaggagagttcatcgggaaatgaaccgttgaagacattattggagagat 2996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tcaccaatccagaggagagttcatcgggaaatgaaccgttgaagacattattggagagat 541
Query: 2997 tgaggtgacgaagctcatagagattggagatttgcggcggaataggacctgagatctgat 3056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tgaggtgacgaagctcatagagattggagatttgcggcggaataggacctgagatctgat 481
Query: 3057 tagcagcgagtgatagattctgtagcagaggtaaatgagctacgtcggaggagagagttc 3116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tagcagcgagtgatagattctgtagcagaggtaaatgagctacgtcggaggagagagttc 421
Query: 3117 cggagaggttaagacctgagaggtcgagagaggtcacctgacggagagaaacgtcccacc 3176
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||
Sbjct: 420 cggagaggttaagacctgagaggtcgagagaggtcacgtgacggagagagacgtcgcacg 361
Query: 3177 tgacacccgtccatgaacagaaagttgttgaaaggttccatgaggtcaggagaggtgagt 3236
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tgacaccggtccatgaacagaaagttgttgaaaggttccatgaggtcaggagaggtgagt 301
Query: 3237 gttcctcgatggtgaaggaggatttgagtgagagaagagcctggagctcggtgattggtt 3296
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 300 gttcgtcgatggtgaaggaggatttgagtgagagaagagcgtggagctcggtgattggtt 241
Query: 3297 tagcgacggtgaaggaatgagaaatgtggaggagaaggaggaggaggaggagaagaaaaa 3356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 240 tagcgacggtgaaggaatgagaaatgtggaggagaaggaggaggaggaggagaagaagaa 181
Query: 3357 gcttcattttttttttgttttttttcttctctttctgtgtaagttagggtttggttttaa 3416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gcttcattttttttttgttttttttcttctctttctgtgtaagttagggtttggttttaa 121
Query: 3417 aaagggtgagagtaagtgaggaagatgaagattgtgtctgtgttttttatgagttttatt 3476
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 120 aaagggtgagagtaagtgaggaagatgaagattgtgtgtgtgttttttatgagttttatt 61
Query: 3477 tgtatattgtaaaagtattatttttattttattttggaatttacttggagggagattttt 3536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tgtatattgtaaaagtattatttttattttattttggaatttacttggagggagattttt 1
Score = 1372 bits (692), Expect = 0.0
Identities = 692/692 (100%)
Strand = Plus / Minus
Query: 1 ctcgaaattcgatttcctgaaattaaccacttatcatgcaaaattcaaccgcaatgtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3449 ctcgaaattcgatttcctgaaattaaccacttatcatgcaaaattcaaccgcaatgtaca 3390
Query: 61 tattcaaaattcctacacgaataattgtggcagcagtgaaaaaagaaatgcaacaacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3389 tattcaaaattcctacacgaataattgtggcagcagtgaaaaaagaaatgcaacaacctt 3330
Query: 121 aagagttaaaccactaattgttgccttaaccggaaccagacaacaacgggctaattaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3329 aagagttaaaccactaattgttgccttaaccggaaccagacaacaacgggctaattaagt 3270
Query: 181 aattaactccactaccgagacgtcggtgacaagaaaattagaaagacaaatttgcccctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3269 aattaactccactaccgagacgtcggtgacaagaaaattagaaagacaaatttgcccctc 3210
Query: 241 aatgaccaaacccaatcgccggaaagtctaattacttaaaagatccggtggacttcctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3209 aatgaccaaacccaatcgccggaaagtctaattacttaaaagatccggtggacttcctga 3150
Query: 301 atccggcgacgattcattaatcgccggagctttctcagtcacgtctgattccgccgcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3149 atccggcgacgattcattaatcgccggagctttctcagtcacgtctgattccgccgcttg 3090
Query: 361 ctgcttcgaaagaggaatttttgggatctcagtgagaatctgaacgacttcacgcatcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3089 ctgcttcgaaagaggaatttttgggatctcagtgagaatctgaacgacttcacgcatcgt 3030
Query: 421 cggcctctccaccgcttgttcttcaacgcagagcaacgcaacgtagaagacgtgtgttac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3029 cggcctctccaccgcttgttcttcaacgcagagcaacgcaacgtagaagacgtgtgttac 2970
Query: 481 ctcgtgaactggaactgaagagagtctaagatcgattactttgagcacacaatctttatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2969 ctcgtgaactggaactgaagagagtctaagatcgattactttgagcacacaatctttatt 2910
Query: 541 tgaatccgtcatgcttctcacccattgaacaatatcaacgccgtcgccaaattctccgac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2909 tgaatccgtcatgcttctcacccattgaacaatatcaacgccgtcgccaaattctccgac 2850
Query: 601 gggttttttcccggtgatgagttctagaagaacaacaccgaaactatacacatcgctctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2849 gggttttttcccggtgatgagttctagaagaacaacaccgaaactatacacatcgctctt 2790
Query: 661 ctcatctaccttcaatgtatacgcgtactctg 692
||||||||||||||||||||||||||||||||
Sbjct: 2789 ctcatctaccttcaatgtatacgcgtactctg 2758
Score = 36.2 bits (18), Expect = 2.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 2492 gatttcaagcttgaaatc 2509
||||||||||||||||||
Sbjct: 1028 gatttcaagcttgaaatc 1045
>At5g65700.1 68418.m08269 leucine-rich repeat transmembrane protein kinase,
putative
Length = 3380
Score = 511 bits (258), Expect = e-143
Identities = 809/992 (81%), Gaps = 3/992 (0%)
Strand = Plus / Minus
Query: 1505 caaggacccaaatacggaccacaaagatgagagttacccacaaacgatgtgtaattgaag 1564
|||||||| | ||| |||||||| |||| || ||||||| ||||||||||| ||||||
Sbjct: 1922 caaggaccaagataaggaccacagagatcaggattacccaagaacgatgtgtagttgaag 1863
Query: 1565 taactaaactgtccagtgctgggaactaaaccggagagattgttgtaagagaaatcaacc 1624
||||| || ||||| || | ||||||||||||||||| |||||||||||||||||||
Sbjct: 1862 taactgaattgtcctgttcccggaactaaaccggagaggttgttgtaagagaaatcaaga 1803
Query: 1625 gatgtcaaactctgcattgatgctatcgtcacaggtatggaaccaacgagatggtttctt 1684
||||| || ||||||||||| | || | |||| || || ||||| |||||||||||
Sbjct: 1802 gatgttaagctctgcattgacgagattgaaccagggattgatccaaccagatggtttctc 1743
Query: 1685 gaaagattcaagtaattcaagatcttcatacctgtgagttcattaggaatatcacctgag 1744
|| || |||||||||||||| ||||||||| | |||| ||||| || || ||||| |||
Sbjct: 1742 gacaggttcaagtaattcaatatcttcatagcagtgatctcatttgggatttcaccggag 1683
Query: 1745 agctcattacggctaagatcaacaaacgttagcagcttacaacgactgatctccggtgcg 1804
||||| || | ||| |||||||||||||||| ||||| |||||||| |||||||| |||
Sbjct: 1682 agctcgtttctgctcagatcaacaaacgttaagagcttgcaacgactaatctccggcgcg 1623
Query: 1805 atccgaccggagaacagattgtggctaaaatccaacttagatagctgctgaagcctccca 1864
|| ||||||||||||| |||||||| ||||| | ||| || |||||||||||| ||||
Sbjct: 1622 attcgaccggagaacaagttgtggctgaaatcaatcttcgagagctgctgaagcttccct 1563
Query: 1865 atctcgggaggaatcgaaccagagaacttgttaccatcaagaagtagtttttgaacaccg 1924
| ||| | |||||| | ||| ||||||||| ||||||||||| ||||| ||||| |||
Sbjct: 1562 acctctgaaggaataggaccttggaacttgtttccatcaagaagaagtttctgaacgccg 1503
Query: 1925 gacaagtttccaatagctgcaggtaatgaaccagagagctggttattagaaagactaatc 1984
| ||||| || || || | |||||||| ||| ||||||||||| || || | ||| |||
Sbjct: 1502 gtgaagttcccgatcgccggaggtaatggacctgagagctggttgtttgataaactgatc 1443
Query: 1985 tgaccaaggtcaccagagactcctcctccgcttattggcaactctccggtaaggtaattg 2044
|||||||| | | ||||||| ||||| || | ||| |||||||||| || |||||
Sbjct: 1442 tgaccaagattaacagagacacctccggcg---actggtaactctccggagagataatta 1386
Query: 2045 tcttggagctccacttgagataatttaggtaacccgaagagctcctttggaatcgacccg 2104
||||||||||||||||||| |||||| ||||| ||||| || | ||||| || ||||||
Sbjct: 1385 tcttggagctccacttgagttaatttgggtaatccgaatagtccttttgggattgacccg 1326
Query: 2105 ttaaggaaattctcacccatccggatccgggtcagagactcacatttaccaagcgaatcc 2164
|| ||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||
Sbjct: 1325 ttcaggaaattctcacccattcggatccgggtcaaagactcacatttaccaagagaatca 1266
Query: 2165 ggtattgaaccaaacaagaagttgccaagagtgattaacgtcattaaccggttaccagaa 2224
|| ||||||||||| | ||||| |||||||||||||| || |||| |||||| ||
Sbjct: 1265 gggattgaaccaaagagaaagtttccaagagtgattaaagtttctaacttgttaccggag 1206
Query: 2225 cacatattcggcggcagagttccggtgagtttgttcgaagagagatcaagaatcactaat 2284
||||| |||||||| | ||||||||| || || || ||||||||||| | | || |
Sbjct: 1205 cacatgttcggcggtaaagttccggtcagcttattggaagagagatcgacgagatttagt 1146
Query: 2285 ctaccattttcccccaatttctgaggaatactaccagtgaaattgttctcccaaagctgc 2344
|||| ||||| || |||||||| || || || || |||||||||||||||||||||||
Sbjct: 1145 ttaccgttttctcctaatttctgcgggatgcttccggtgaaattgttctcccaaagctgt 1086
Query: 2345 aacacttcaagctccggcatttcaccgatgaactcaggtatagcaccgtagagcttattc 2404
||||||||||||||||||| || ||||||||||| ||||| | |||| || || ||
Sbjct: 1085 aacacttcaagctccggcaaatctccgatgaactccggtatctcgccgtgaagtttgtta 1026
Query: 2405 ctgaagagattcaaaagcgttaagttcttcagctgtgaaaaactcgtcggaatctcgccg 2464
| |||||||||||||||||| | ||||||| || || ||||||| |||||||| |||
Sbjct: 1025 cggaagagattcaaaagcgtgagattcttcaactctgcgaaactcgctggaatctctccg 966
Query: 2465 gtaaacatattgttagacagatccatcgattt 2496
|| ||||| |||||||||| |||||| |||||
Sbjct: 965 gtgaacatgttgttagacaaatccattgattt 934
Score = 474 bits (239), Expect = e-132
Identities = 548/651 (84%)
Strand = Plus / Minus
Query: 777 ctggagctatgtagccgtaggagccggcaattgcggacatacattcagaagtaccggaat 836
||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 2665 ctggagctatgtagccgtaagagccagcgattgcagacatacattcagaagtaccggaat 2606
Query: 837 cttggaggaacttggcgagaccaaagtcggcgacatgagcttcgaagttggaatcgagga 896
|||| ||||| || |||||||||||||| || ||||||||||| ||||| ||||| ||||
Sbjct: 2605 cttgaaggaatttagcgagaccaaagtcagcaacatgagcttcaaagtttgaatcaagga 2546
Query: 897 ggatgttgttggatttaacatctctatggacgatcaacggggaacaatcatggtggagat 956
|||||||||| ||||| |||||||| || |||||||| || |||||||| || || || |
Sbjct: 2545 ggatgttgtttgatttgacatctctgtgaacgatcaatggagaacaatcgtgatgaaggt 2486
Query: 957 agcaaagacccttggctgcttcaagagctatcttataacgtgtgttccaatgtaaatgac 1016
| || || || || || ||||||||||| ||||| |||||||||| |||||| || || |
Sbjct: 2485 aacagagtcctttagcagcttcaagagcaatcttgtaacgtgtgtcccaatgcaagtgtc 2426
Query: 1017 ctcctttctttccatgaagaacctctccaaggctaccattaggcatgtactcgtacacaa 1076
|||||||||| || ||||| ||||| || || |||||||||||||||||||| || ||||
Sbjct: 2425 ctcctttcttaccgtgaagcacctcaccgagactaccattaggcatgtactcatagacaa 2366
Query: 1077 ggagattcgtttcgtggttggagcaaaaaccgagcagtctcacgatgtgtctgtgtctga 1136
| |||||||| |||||||| |||||||| ||||| || ||||| |||||||||||||| |
Sbjct: 2365 gtagattcgtctcgtggtttgagcaaaatccgagaagcctcactatgtgtctgtgtctta 2306
Query: 1137 ttctacctagcgtctgaatctcggcgttgaacccgtgatcgtgggaagatccatgggaca 1196
| || |||| || |||||||| |||||||| |||||||| |||||||||||| | ||||
Sbjct: 2305 tccttcctaaggtttgaatctctgcgttgaagccgtgatcatgggaagatccacgagaca 2246
Query: 1197 ttgtagccaatcgtttgaccgcgactaggtcgcctttaggcatagtgcctttgtagacaa 1256
||| ||| | || ||| ||||||||||| || || |||||||| |||||| |||||||
Sbjct: 2245 ttgcagcgagtcttttaaccgcgactagatcaccattaggcattacgcctttatagacaa 2186
Query: 1257 tcccagcaccgcctttaccgatgatgttgtcttccttgagagagtccaagacatcgtcac 1316
| ||||| || ||||| || || ||||||||||| |||||||| ||||||||||||||||
Sbjct: 2185 taccagctcctcctttgcctataatgttgtcttctttgagagaatccaagacatcgtcac 2126
Query: 1317 aagtgaagtctagcctctggaaagcagtcaatctccatgccttggcttcactcgcatttc 1376
| ||||||||||| ||||||||||| || || ||||| ||| | |||||||| |||
Sbjct: 2125 acgtgaagtctagtctctggaaagctgttaacctccaagcccgtgactcactcgcctttt 2066
Query: 1377 gcaaggaccgagctttgattatggccactatagcaaacaccatcgaacaaa 1427
||| || | ||||||||||||||| |||| || ||| | ||||||||||
Sbjct: 2065 tcaatgatctagctttgattatggctactaccgcgaacgcaatcgaacaaa 2015
Score = 422 bits (213), Expect = e-117
Identities = 537/645 (83%)
Strand = Plus / Minus
Query: 2563 cgtatctagcttctgaagcttcccaatctccggtggaatctctccggttaaaccacaatt 2622
|||||| || ||||||||||||||||||||||| |||||||| |||||||| || |||||
Sbjct: 867 cgtatcgagtttctgaagcttcccaatctccggcggaatctcaccggttaatccgcaatt 808
Query: 2623 agcagcgtcgaaccgaacaagctctgataaatttccaatctccggtggaagaccattttc 2682
||| ||||||| | || ||||| |||| |||||| ||||| || |||||||| | |||
Sbjct: 807 agctccgtcgaatctgactagctccgatagatttccgatctctggaggaagaccgtcttc 748
Query: 2683 aaaagcgttgtaatatccgatgtaaagttcacgaagagtcgttaggtttccgatctccgg 2742
||||||||||| || ||||||||||| || || ||||||||||||||||||||||| ||
Sbjct: 747 gaaagcgttgtagtagccgatgtaaagctcccggagagtcgttaggtttccgatctctgg 688
Query: 2743 agggattttaccggttagctcgttaccggaaaccgctaagtattcgagaacaggccaggt 2802
||||||||| ||| |||||||| ||||||||||||| || || | ||| |||||| |
Sbjct: 687 agggattttcccgacaagctcgttgccggaaaccgctagatactcaataactggccagct 628
Query: 2803 tccgtacgtcgccgggattttgccggagaagtaattcccaccgaggtgaagatgacggag 2862
|||||||| | |||||| || || | |||||| || |||||||||||||| || |||||
Sbjct: 627 tccgtacgaaggcgggatctttccagcgaagtagttaccaccgaggtgaaggtgccggag 568
Query: 2863 ctgagtgagattagtgagtgaaaccggtaaatctccggttaaattgttgttgtataagtc 2922
|||||| ||||| |||| |||||||||||||||||||||| |||||||||||| | ||
Sbjct: 567 ctgagtcagattggtgacggaaaccggtaaatctccggttagattgttgttgtagacatc 508
Query: 2923 aagaacacggagattcaccaatccagaggagagttcatcgggaaatgaaccgttgaagac 2982
|||||| |||||||||||||||||||| || | ||||||||||| ||||||||||||||
Sbjct: 507 aagaactcggagattcaccaatccagaagaaatctcatcgggaaacgaaccgttgaagac 448
Query: 2983 attattggagagattgaggtgacgaagctcatagagattggagatttgcggcggaatagg 3042
||| || |||||||| | ||||||||| | | || | ||||||| ||||||||| ||
Sbjct: 447 attgttcgagagatttaagtgacgaagaccggaaaggctcgagatttccggcggaatcgg 388
Query: 3043 acctgagatctgattagcagcgagtgatagattctgtagcagaggtaaatgagctacgtc 3102
||| ||||| |||| ||||||||||||||||||| || ||| ||||||||| || ||
Sbjct: 387 accggagattagattttcagcgagtgatagattctgaagaagacgtaaatgagaaacatc 328
Query: 3103 ggaggagagagttccggagaggttaagacctgagaggtcgagagaggtcacctgacggag 3162
| ||| ||||| ||||||||||| ||||| ||||| || ||||| ||||| |||||| |
Sbjct: 327 tggggaaagagtaccggagaggttgagaccggagagatcaagagaagtcacgtgacggcg 268
Query: 3163 agaaacgtcccacctgacacccgtccatgaacagaaagttgttga 3207
||| || || ||| ||||||| |||||| |||||| |||||||
Sbjct: 267 agatacatcgcacgtgacaccaatccatgtacagaagcttgttga 223
Score = 210 bits (106), Expect = 6e-53
Identities = 259/310 (83%)
Strand = Plus / Minus
Query: 383 gggatctcagtgagaatctgaacgacttcacgcatcgtcggcctctccaccgcttgttct 442
||||||||||||||||||||||| ||||| | ||| ||||||||||| || |||||||||
Sbjct: 2972 gggatctcagtgagaatctgaacaacttctctcatagtcggcctctcaacagcttgttct 2913
Query: 443 tcaacgcagagcaacgcaacgtagaagacgtgtgttacctcgtgaactggaactgaagag 502
|| || ||||||| ||| || ||||||||||| || || || |||| |||| |||||
Sbjct: 2912 tctacacagagcatcgctacatagaagacgtgcgtcacttcatgaatcggaatcgaagaa 2853
Query: 503 agtctaagatcgattactttgagcacacaatctttatttgaatccgtcatgcttctcacc 562
||||| |||| | |||||| || || |||| || || ||||| ||||| | | |||
Sbjct: 2852 agtctcggatccaatactttcagaaccgaatccttgttcgaatcagtcattttacgaacc 2793
Query: 563 cattgaacaatatcaacgccgtcgccaaattctccgacgggttttttcccggtgatgagt 622
||||| || ||||| || ||||| |||||||||||||| |||||| | ||||||| ||||
Sbjct: 2792 cattgcactatatcgacaccgtctccaaattctccgacaggttttcttccggtgacgagt 2733
Query: 623 tctagaagaacaacaccgaaactatacacatcgctcttctcatctaccttcaatgtatac 682
|| | |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2732 tccaaaagaaccacaccgaaactatacacatcgctcttctcatctaccttcaacgtatac 2673
Query: 683 gcgtactctg 692
|| |||||||
Sbjct: 2672 gcatactctg 2663
Score = 44.1 bits (22), Expect = 0.008
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 3303 cggtgaaggaatgagaaatgtggaggagaa 3332
||||||||| ||||||||||||||| ||||
Sbjct: 121 cggtgaaggtatgagaaatgtggagaagaa 92
Score = 34.2 bits (17), Expect = 7.8
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 3344 aggagaagaaaaagcttcatt 3364
|||||||||||||| ||||||
Sbjct: 86 aggagaagaaaaagtttcatt 66
>At4g20270.1 68417.m02961 leucine-rich repeat transmembrane protein kinase,
putative CLAVATA1 receptor kinase, Arabidopsis th.,
PATX:G2160756
Length = 3295
Score = 109 bits (55), Expect = 2e-22
Identities = 103/119 (86%)
Strand = Plus / Minus
Query: 1040 tctccaaggctaccattaggcatgtactcgtacacaaggagattcgtttcgtggttggag 1099
||||| ||||||||||||||||| |||||||| |||||||||||| || | ||| ||
Sbjct: 2545 tctccgaggctaccattaggcatatactcgtaaacaaggagattcacgtctttgtttgaa 2486
Query: 1100 caaaaaccgagcagtctcacgatgtgtctgtgtctgattctacctagcgtctgaatctc 1158
|||||| |||||| |||||| |||| |||||||||||||||||||| |||||||||||
Sbjct: 2485 caaaaagcgagcaatctcactatgtttctgtgtctgattctacctaatgtctgaatctc 2427
Score = 38.2 bits (19), Expect = 0.50
Identities = 28/31 (90%)
Strand = Plus / Minus
Query: 638 ccgaaactatacacatcgctcttctcatcta 668
||||| || ||||||||||||||||| ||||
Sbjct: 2863 ccgaagctgtacacatcgctcttctcgtcta 2833
Score = 34.2 bits (17), Expect = 7.8
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1244 cctttgtagacaatccc 1260
|||||||||||||||||
Sbjct: 2341 cctttgtagacaatccc 2325
Score = 34.2 bits (17), Expect = 7.8
Identities = 23/25 (92%)
Strand = Plus / Minus
Query: 777 ctggagctatgtagccgtaggagcc 801
||||||| ||||||||||| |||||
Sbjct: 2811 ctggagcgatgtagccgtacgagcc 2787
>At1g75820.1 68414.m08807 CLAVATA1 receptor kinase (CLV1) identical to receptor
kinase (CLV1) GB:AAB58929 GI:2160756 [Arabidopsis
thaliana]
Length = 3431
Score = 63.9 bits (32), Expect = 9e-09
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 1039 ctctccaaggctaccattaggcatgtactcgtacacaaggagattcgt 1086
|||||||||||| ||||||||||||||||| || | ||||||||||||
Sbjct: 2647 ctctccaaggcttccattaggcatgtactcataaagaaggagattcgt 2600
Score = 61.9 bits (31), Expect = 3e-08
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 899 atgttgttggatttaacatctctatggacgatcaacggggaacaatcatggtggagata 957
||||| ||||| |||||||||||||| | |||||| || |||||||||||||| |||||
Sbjct: 2787 atgttattggacttaacatctctatgcaagatcaatggtgaacaatcatggtgaagata 2729
Score = 54.0 bits (27), Expect = 8e-06
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 638 ccgaaactatacacatcgctcttctcatctaccttcaatgtatacgcgtactctg 692
||||||||||||||||| |||||||| || || ||||| ||||| || |||||||
Sbjct: 2961 ccgaaactatacacatcactcttctcgtccactttcaaggtatatgcatactctg 2907
Score = 52.0 bits (26), Expect = 3e-05
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 1249 gtagacaatcccagcaccgcctttaccgatgatgttgtcttc 1290
||||||||| ||||| |||||||||||||| ||||| |||||
Sbjct: 2440 gtagacaattccagctccgcctttaccgattatgttctcttc 2399
Score = 38.2 bits (19), Expect = 0.50
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 2444 aaactcgtcggaatctcgccggt 2466
||||||||||||||||| |||||
Sbjct: 1101 aaactcgtcggaatctctccggt 1079
Score = 34.2 bits (17), Expect = 7.8
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 2321 gtgaaattgttctccca 2337
|||||||||||||||||
Sbjct: 1368 gtgaaattgttctccca 1352
>At4g29450.1 68417.m04204 leucine-rich repeat protein kinase, putative similar to
light repressible receptor protein kinase [Arabidopsis
thaliana] gi|1321686|emb|CAA66376; contains leucine rich
repeat (LRR) domains, Pfam:PF00560; contains protein
kinase domain, Pfam:PF00069
Length = 2592
Score = 52.0 bits (26), Expect = 3e-05
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 614 gtgatgagttctagaagaacaacaccgaaactatacacatcgctcttctc 663
||||||||||| |||||||| || || ||||| ||||| |||||||||||
Sbjct: 2321 gtgatgagttcaagaagaacgaccccaaaactgtacacgtcgctcttctc 2272
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 125,690
Number of Sequences: 29161
Number of extensions: 125690
Number of successful extensions: 5524
Number of sequences better than 10.0: 526
length of query: 3539
length of database: 44,058,232
effective HSP length: 19
effective length of query: 3520
effective length of database: 43,504,173
effective search space: 153134688960
effective search space used: 153134688960
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)