BLASTN 2.2.3 [Apr-24-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= PTA.CL.1.cl.132.Contig1
         (2411 letters)

Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa 
           29,161 sequences; 44,058,232 total letters

Searching..................................................done


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g65683.1  68418.m08265 zinc finger (C3HC4-type RING finge...  4674   0.0  
At4g37890.2  68417.m05359 zinc finger (C3HC4-type RING finge...    66   2e-09
At4g37890.1  68417.m05358 zinc finger (C3HC4-type RING finge...    66   2e-09
At2g22680.1  68415.m02688 zinc finger (C3HC4-type RING finge...    54   6e-06
At2g40520.1  68415.m05000 nucleotidyltransferase family prot...    52   2e-05
>At5g65683.1 68418.m08265 zinc finger (C3HC4-type RING finger) family protein
            contains Pfam profiles PF00097: Zinc finger, C3HC4 type
            (RING finger), PF00092: von Willebrand factor type A
            domain
          Length = 2377

 Score = 4674 bits (2358), Expect = 0.0
 Identities = 2371/2374 (99%), Gaps = 1/2374 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    agtatttaatttctccatcttccttatgatccattatgcccaaagtccttcttcttcttc 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    agtatttaatttctccatcttccttatgatccattatgcccaaagtccttcttcttcttc 60

                                                                        
Query: 61   tctataattacttccacaaatagaagaagaagaagaagaagaataatatagaaaaaaaga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tctataattacttccacaaatagaagaagaagaagaagaagaataatatagaaaaaaaga 120

                                                                        
Query: 121  gagcttctcttcttatttctttctcacaggaaatggtgtttggttggagaaaagcgtttt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gagcttctcttcttatttctttctcacaggaaatggtgtttggttggagaaaagcgtttt 180

                                                                        
Query: 181  gcacttccgtttcaagtaatcaagataaacctcaacaacattcatcattacacactactg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gcacttccgtttcaagtaatcaagataaacctcaacaacattcatcattacacactactg 240

                                                                        
Query: 241  atcctccaattcccacaccaagattccgatcaaagttaggttttttatccaacccttcaa 300
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241  atcctccaattcccacaccaagattccgatcaaagtttggttttttatccaacccttcaa 300

                                                                        
Query: 301  ctcctcgtctccgatcacgcggcggaagcggcactggatgccgctcctcagcttccacat 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ctcctcgtctccgatcacgcggcggaagcggcactggatgccgctcctcagcttccacat 360

                                                                        
Query: 361  cagtcactatcccatctcttccaactagtcccaaactccattgcaggactacgagcaatg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  cagtcactatcccatctcttccaactagtcccaaactccattgcaggactacgagcaatg 420

                                                                        
Query: 421  ctactccaaggactagtaacagctcaagtcccaagtttttctctaacccttcttctccta 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  ctactccaaggactagtaacagctcaagtcccaagtttttctctaacccttcttctccta 480

                                                                        
Query: 481  aatcatcatcttcttcttcctctcaaggcggcggcggcgtctctctcctccgtgccacgc 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  aatcatcatcttcttcttcctctcaaggcggcggcggcgtctctctcctccgtgccacgc 540

                                                                        
Query: 541  ttcttctcaacaagagtaatagtagtagatgtgcgatttgtttgcagagagtgaattcaa 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  ttcttctcaacaagagtaatagtagtagatgtgcgatttgtttgcagagagtgaattcaa 600

                                                                        
Query: 601  atcaaagcaactcgacggcggcaattttcacggcggagtgttcacattcgtttcaccttt 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  atcaaagcaactcgacggcggcaattttcacggcggagtgttcacattcgtttcaccttt 660

                                                                        
Query: 661  cttgcgtcaatggattagaagacaagcgttgtccgttttgctctgccgcatggaatcacg 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  cttgcgtcaatggattagaagacaagcgttgtccgttttgctctgccgcatggaatcacg 720

                                                                        
Query: 721  cgccaaagtcgaattatccggctgttaataataacttcggatccgacccgattagacgac 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  cgccaaagtcgaattatccggctgttaataataacttcggatccgacccgattagacgac 780

                                                                        
Query: 781  ccgagatccgagagatcaaaacggggaagtcactgagagtgtacaacgacgatgagccgt 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  ccgagatccgagagatcaaaacggggaagtcactgagagtgtacaacgacgatgagccgt 840

                                                                        
Query: 841  tagcttattcgccggtttctcttgctcagatcaacactatacatgaatcagacgaaaacg 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  tagcttattcgccggtttctcttgctcagatcaacactatacatgaatcagacgaaaacg 900

                                                                        
Query: 901  acgacgttgaagatgacgatgacttccccggattcttccgagattcttcgattacgtctg 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  acgacgttgaagatgacgatgacttccccggattcttccgagattcttcgattacgtctg 960

                                                                        
Query: 961  atatggttccttcaatctcaggaaatctggaggttaagttgctgccggaatctgccgttg 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  atatggttccttcaatctcaggaaatctggaggttaagttgctgccggaatctgccgttg 1020

                                                                        
Query: 1021 tggaaaccgggaaaaagaaggagacacacgtcgtcatcatgaaactaaaagcgtctccgt 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tggaaaccgggaaaaagaaggagacacacgtcgtcatcatgaaactaaaagcgtctccgt 1080

                                                                        
Query: 1081 cgccgtcgtccatcaccgatgcgattaaggcgcgaagaccatcgatagatctggtaacgg 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cgccgtcgtccatcaccgatgcgattaaggcgcgaagaccatcgatagatctggtaacgg 1140

                                                                        
Query: 1141 ttctcgatttaagcaacggcggtgctaatttgcaaacggttaaacacgcgatgagatcgg 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ttctcgatttaagcaacggcggtgctaatttgcaaacggttaaacacgcgatgagatcgg 1200

                                                                        
Query: 1201 tgatctctcttctccgagaaatggatcgtttatcgatcgtcgttttctcgacggggtcaa 1260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 tgatctctcttctccgagaaatggatcgtttatcgatcgtcgttttctcgacggggtcaa 1260

                                                                        
Query: 1261 aacggttaatgccgttacgacgaatgacggcgaaaggaagacgatcggcgcggcgaatgg 1320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 aacggttaatgccgttacgacgaatgacggcgaaaggaagacgatcggcgcggcgaatgg 1320

                                                                        
Query: 1321 tcgacgcactcggcggaatggaaaccaccggcggagttggaatgagcgttaacgacgcgt 1380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 tcgacgcactcggcggaatggaaaccaccggcggagttggaatgagcgttaacgacgcgt 1380

                                                                        
Query: 1381 tgaagaaagcggttaaagtcgttgaagatcggcgggagaagaatccgtcaacgagcatct 1440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 tgaagaaagcggttaaagtcgttgaagatcggcgggagaagaatccgtcaacgagcatct 1440

                                                                        
Query: 1441 ttgttttatcggacggtcaagatcaaccggaggcagttttgaaagctaaactaaacgcaa 1500
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 ttgttttatcggacggtcaagatcaaccggaggcagttttgaaagctaaactaaacgcaa 1500

                                                                        
Query: 1501 cgcgcattccgttcgtcgtgtctaccacgcgtttctctcgtccggagatcccggttcatt 1560
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 cgcgcattccgttcgtcgtgtctaccacgcgtttctctcgtccggagatcccggttcatt 1560

                                                                        
Query: 1561 ccgtttacattgcttctcctggagcgttgcttcacgcgccgctacgagacgcgttcaccg 1620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 ccgtttacattgcttctcctggagcgttgcttcacgcgccgctacgagacgcgttcaccg 1620

                                                                        
Query: 1621 aaagaatcgcttcgttgctcaacgtgactctccataacgtgaagctaaatctcagtttgg 1680
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1621 aaagaatcgcttcgttgctcaacgtgactctccataacgtgaagctaaatctcagtttgg 1680

                                                                        
Query: 1681 tcaacggatctcatttgactgagatttcatcggtttaccctttaaccggtcgactcgaga 1740
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1681 tcaacggatctcatttgactgagatttcatcggtttactctttaaccggtcgactcgaga 1740

                                                                        
Query: 1741 atttcggatccggttctgtcatccaagtcggagatttgtttgcggaggaggagagagagt 1800
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1741 atttcggatccggttctgtcatccaagtcggagatttgtttgcggaggaggagagagagt 1800

                                                                        
Query: 1801 ttctcgttgagctcaaagtgccgacttcgtcgagtggttcccaccaagtaatgtccgtac 1860
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1801 ttctcgttgagctcaaagtgccgacttcgtcgagtggttcccaccaagtaatgtccgtac 1860

                                                                        
Query: 1861 agtcgtcgatcgttgaccaaatgacacatcagccaatgacatgtcctaaagaaaaacgat 1920
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1861 agtcgtcgatcgttgaccaaatgacacatcagccaatgacatgtcctaaagaaaaacgat 1920

                                                                        
Query: 1921 ttttgatcccacggccacaatccgtcagatatgtatcttcaagcatcgaacggctgagaa 1980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1921 ttttgatcccacggccacaatccgtcagatatgtatcttcaagcatcgaacggctgagaa 1980

                                                                        
Query: 1981 atttacactccatgtgccgcgctgtagcggattcacgccggcttatcgagcgtgaggatt 2040
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1981 atttacactccatgtgccgcgctgtagcggattcacgccggcttatcgagcgtgaggatt 2040

                                                                        
Query: 2041 tatccggagcgtatcaggttctaacgacggctcggtccaatgcgtctcattcggatgata 2100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 tatccggagcgtatcaggttctaacgacggctcggtccaatgcgtctcattcggatgata 2100

                                                                        
Query: 2101 gtttaaggagtttggaggttgagctaaatgaacttagccggattaaaccgagaaatagta 2160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 gtttaaggagtttggaggttgagctaaatgaacttagccggattaaaccgagaaatagta 2160

                                                                        
Query: 2161 tattaaaccgaactgaagataaaccggagcagcttacccctacttcggcttggagagccg 2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 tattaaaccgaactgaagataaaccggagcagcttacccctacttcggcttggagagccg 2220

                                                                        
Query: 2221 ccgagaaattagctaaagtggctattatgaggaagcatttaaatcgagtcagcgatatgc 2280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 ccgagaaattagctaaagtggctattatgaggaagcatttaaatcgagtcagcgatatgc 2280

                                                                        
Query: 2281 acggcttggaaaacgccagattttaattttaatttccctttttttcgaaaattcgatttc 2340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 acggcttggaaaacgccagattttaattttaatttccctttttttcgaaaattcgatttc 2340

                                              
Query: 2341 aatgatttttgaaatatataatggtacataattt 2374
            ||||||||||| ||||||||||||||||||||||
Sbjct: 2341 aatgatttttg-aatatataatggtacataattt 2373
>At4g37890.2 68417.m05359 zinc finger (C3HC4-type RING finger) family protein
            contains Pfam profiles PF00097: Zinc finger, C3HC4 type
            (RING finger), PF00092: von Willebrand factor type A
            domain
          Length = 2276

 Score = 65.9 bits (33), Expect = 2e-09
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2187 gagcagcttacccctacttcggcttggagagccgccgagaaattagctaaagtggctatt 2246
            |||| |||||| || ||||| || |||||||| || |||| ||| ||||||||||| || 
Sbjct: 2081 gagccgcttacaccgacttcagcgtggagagcggctgagagattggctaaagtggcgatc 2140

                                         
Query: 2247 atgaggaagcatttaaatcgagtcagcga 2275
            |||||||||||| | ||| ||||||||||
Sbjct: 2141 atgaggaagcatatgaatagagtcagcga 2169

 Score = 50.1 bits (25), Expect = 9e-05
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 619 cggcaattttcacggcggagtgttcacattcgtttca 655
           |||| |||||||||||||| ||||||||| |||||||
Sbjct: 525 cggcgattttcacggcggaatgttcacatacgtttca 561

 Score = 46.1 bits (23), Expect = 0.001
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1215 cgagaaatggatcgtttatcgatcgtcgttttctcgacggggtcaaaacggttaatgccg 1274
            ||||||| ||||||||||||||| |||   |||||| || | || || || || | ||||
Sbjct: 1130 cgagaaacggatcgtttatcgatggtctcgttctcgtcgagctcgaagcgattgacgccg 1189

                                           
Query: 1275 ttacgacgaatgacggcgaaaggaagacgat 1305
            |||||  ||||||||||||| ||||| ||||
Sbjct: 1190 ttacggagaatgacggcgaacggaaggcgat 1220

 Score = 34.2 bits (17), Expect = 5.3
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 81  tagaagaagaagaagaa 97
           |||||||||||||||||
Sbjct: 398 tagaagaagaagaagaa 382

 Score = 34.2 bits (17), Expect = 5.3
 Identities = 44/53 (83%)
 Strand = Plus / Plus

                                                                
Query: 871 tcaacactatacatgaatcagacgaaaacgacgacgttgaagatgacgatgac 923
           ||||||||||||  |||||| ||||| |||| || |  |||||| ||||||||
Sbjct: 795 tcaacactataccggaatcaaacgaagacgaagaagaagaagataacgatgac 847
>At4g37890.1 68417.m05358 zinc finger (C3HC4-type RING finger) family protein
            contains Pfam profiles PF00097: Zinc finger, C3HC4 type
            (RING finger), PF00092: von Willebrand factor type A
            domain
          Length = 2349

 Score = 65.9 bits (33), Expect = 2e-09
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2187 gagcagcttacccctacttcggcttggagagccgccgagaaattagctaaagtggctatt 2246
            |||| |||||| || ||||| || |||||||| || |||| ||| ||||||||||| || 
Sbjct: 2154 gagccgcttacaccgacttcagcgtggagagcggctgagagattggctaaagtggcgatc 2213

                                         
Query: 2247 atgaggaagcatttaaatcgagtcagcga 2275
            |||||||||||| | ||| ||||||||||
Sbjct: 2214 atgaggaagcatatgaatagagtcagcga 2242

 Score = 50.1 bits (25), Expect = 9e-05
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 619 cggcaattttcacggcggagtgttcacattcgtttca 655
           |||| |||||||||||||| ||||||||| |||||||
Sbjct: 598 cggcgattttcacggcggaatgttcacatacgtttca 634

 Score = 46.1 bits (23), Expect = 0.001
 Identities = 74/91 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1215 cgagaaatggatcgtttatcgatcgtcgttttctcgacggggtcaaaacggttaatgccg 1274
            ||||||| ||||||||||||||| |||   |||||| || | || || || || | ||||
Sbjct: 1203 cgagaaacggatcgtttatcgatggtctcgttctcgtcgagctcgaagcgattgacgccg 1262

                                           
Query: 1275 ttacgacgaatgacggcgaaaggaagacgat 1305
            |||||  ||||||||||||| ||||| ||||
Sbjct: 1263 ttacggagaatgacggcgaacggaaggcgat 1293

 Score = 34.2 bits (17), Expect = 5.3
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 81  tagaagaagaagaagaa 97
           |||||||||||||||||
Sbjct: 387 tagaagaagaagaagaa 371

 Score = 34.2 bits (17), Expect = 5.3
 Identities = 44/53 (83%)
 Strand = Plus / Plus

                                                                
Query: 871 tcaacactatacatgaatcagacgaaaacgacgacgttgaagatgacgatgac 923
           ||||||||||||  |||||| ||||| |||| || |  |||||| ||||||||
Sbjct: 868 tcaacactataccggaatcaaacgaagacgaagaagaagaagataacgatgac 920
>At2g22680.1 68415.m02688 zinc finger (C3HC4-type RING finger) family protein
            contains Pfam profiles PF00097: Zinc finger, C3HC4 type
            (RING finger), PF00092: von Willebrand factor type A
            domain
          Length = 2279

 Score = 54.0 bits (27), Expect = 6e-06
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 1362 atgagcgttaacgacgcgttgaagaaagcggttaa 1396
            ||||| || ||||||||||||||||||||||||||
Sbjct: 1285 atgagtgtgaacgacgcgttgaagaaagcggttaa 1319

 Score = 42.1 bits (21), Expect = 0.022
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 619 cggcaattttcacggcggagtgttc 643
           |||| ||||||||||||||||||||
Sbjct: 548 cggcgattttcacggcggagtgttc 572

 Score = 38.2 bits (19), Expect = 0.34
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 83  gaagaagaagaagaagaag 101
           |||||||||||||||||||
Sbjct: 97  gaagaagaagaagaagaag 115

 Score = 38.2 bits (19), Expect = 0.34
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 1211 tctccgagaaatggatcgtttatcgat 1237
            |||||| || |||||||||||||||||
Sbjct: 1113 tctccgggagatggatcgtttatcgat 1139

 Score = 36.2 bits (18), Expect = 1.3
 Identities = 90/114 (78%)
 Strand = Plus / Plus

                                                                        
Query: 2192 gcttacccctacttcggcttggagagccgccgagaaattagctaaagtggctattatgag 2251
            |||||| || || |||||||||| ||| || ||||  || ||||||||||| ||  ||||
Sbjct: 2058 gcttactccgacgtcggcttggaaagcggcggagaggttggctaaagtggcgatggtgag 2117

                                                                  
Query: 2252 gaagcatttaaatcgagtcagcgatatgcacggcttggaaaacgccagatttta 2305
            ||| ||| | ||  ||||||| ||  |||| || || |||||||| ||||||||
Sbjct: 2118 gaaacatatgaacagagtcagtgacttgcatggtttcgaaaacgctagatttta 2171

 Score = 36.2 bits (18), Expect = 1.3
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 86  gaagaagaagaagaagaa 103
           ||||||||||||||||||
Sbjct: 97  gaagaagaagaagaagaa 114

 Score = 36.2 bits (18), Expect = 1.3
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 78  aaatagaagaagaagaag 95
           ||||||||||||||||||
Sbjct: 445 aaatagaagaagaagaag 428

 Score = 34.2 bits (17), Expect = 5.3
 Identities = 44/53 (83%)
 Strand = Plus / Plus

                                                                 
Query: 1260 aaacggttaatgccgttacgacgaatgacggcgaaaggaagacgatcggcgcg 1312
            |||||||||  |||||||||  | ||||||||||| || ||  ||||||||||
Sbjct: 1162 aaacggttatcgccgttacggaggatgacggcgaacgggaggagatcggcgcg 1214

 Score = 34.2 bits (17), Expect = 5.3
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 82  agaagaagaagaagaag 98
           |||||||||||||||||
Sbjct: 99  agaagaagaagaagaag 115
>At2g40520.1 68415.m05000 nucleotidyltransferase family protein contains Pfam
            profile: PF01909 nucleotidyltransferase domain
          Length = 1913

 Score = 52.0 bits (26), Expect = 2e-05
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 74   ccacaaatagaagaagaagaagaagaagaa 103
            |||| |||||||||||||||||||||||||
Sbjct: 1817 ccaccaatagaagaagaagaagaagaagaa 1788

 Score = 44.1 bits (22), Expect = 0.006
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 82   agaagaagaagaagaagaagaa 103
            ||||||||||||||||||||||
Sbjct: 1806 agaagaagaagaagaagaagaa 1785

 Score = 44.1 bits (22), Expect = 0.006
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 82   agaagaagaagaagaagaagaa 103
            ||||||||||||||||||||||
Sbjct: 1803 agaagaagaagaagaagaagaa 1782

 Score = 44.1 bits (22), Expect = 0.006
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 82   agaagaagaagaagaagaagaa 103
            ||||||||||||||||||||||
Sbjct: 1800 agaagaagaagaagaagaagaa 1779

 Score = 36.2 bits (18), Expect = 1.3
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 82   agaagaagaagaagaagaagaa 103
            |||||||||||||||| |||||
Sbjct: 1794 agaagaagaagaagaaaaagaa 1773
  Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
    Posted date:  Jun 25, 2004 12:58 PM
  Number of letters in database: 44,058,232
  Number of sequences in database:  29,161
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 140,970
Number of Sequences: 29161
Number of extensions: 140970
Number of successful extensions: 18767
Number of sequences better than 10.0: 1464
length of query: 2411
length of database: 44,058,232
effective HSP length: 19
effective length of query: 2392
effective length of database: 43,504,173
effective search space: 104061981816
effective search space used: 104061981816
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)