BLASTN 2.2.3 [Apr-24-2002]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AV532813.r
(399 letters)
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
29,161 sequences; 44,058,232 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45310.1 68415.m05639 NAD-dependent epimerase/dehydratas... 539 e-153
At4g02810.1 68417.m00381 expressed protein 107 7e-23
At5g03710.1 68418.m00331 hypothetical protein 105 3e-22
At4g11385.1 68417.m01836 hypothetical protein 105 3e-22
At3g06660.1 68416.m00784 PAPA-1-like family protein / zinc ... 105 3e-22
>At2g45310.1 68415.m05639 NAD-dependent epimerase/dehydratase family protein
similar to nucleotide sugar epimerase from Vibrio
vulnificus GI:3093975 [PID:g3093975], WbnF [Escherichia
coli] GI:5739472, CAPI protein {Staphylococcus aureus}
SP|P39858; contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 1962
Score = 539 bits (272), Expect = e-153
Identities = 275/276 (99%)
Strand = Plus / Plus
Query: 2 tattcaaatttagagtccatttttgtatttagcaactattcgcaaaacaaatctattaac 61
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 27 tattcaaatttagagtccatttttgtatttagcaactatccgcaaaacaaatctattaac 86
Query: 62 aaaagtttaaaactttggttcaaattcaaaacttttgggacgagtggcttcccgaaaatc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 aaaagtttaaaactttggttcaaattcaaaacttttgggacgagtggcttcccgaaaatc 146
Query: 122 ttggagtattagtatctcaccaatcaaatttcaagactcgacaacaaatctttagaagag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ttggagtattagtatctcaccaatcaaatttcaagactcgacaacaaatctttagaagag 206
Query: 182 tcaacaaatttttacagtaatttttttgactctcttcttcttcttcttcttcttcttctt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tcaacaaatttttacagtaatttttttgactctcttcttcttcttcttcttcttcttctt 266
Query: 242 cttcttcttcttcttcttcttcttcatattttccct 277
||||||||||||||||||||||||||||||||||||
Sbjct: 267 cttcttcttcttcttcttcttcttcatattttccct 302
Score = 240 bits (121), Expect = 7e-63
Identities = 124/125 (99%)
Strand = Plus / Plus
Query: 275 ccttcaagcccaggcaaattcaagatggagaaatcttcctacttgcatcgtctcagattc 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ccttcaagcccaggcaaattcaagatggagaaatcttcctacttgcatcgtctcagattc 652
Query: 335 caatcttctctcacaaagtttgcatttttctccttcttcctcctctgactcatctctcta 394
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 653 caatcttctctcacaaagtttgcatttttctccttcttcctcctctgtctcatctctcta 712
Query: 395 ctctt 399
|||||
Sbjct: 713 ctctt 717
Score = 42.1 bits (21), Expect = 0.003
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 212 tctcttcttcttcttcttctt 232
|||||||||||||||||||||
Sbjct: 569 tctcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 244 tcttcttcttcttcttctt 262
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 238 tcttcttcttcttcttctt 256
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 217 tcttcttcttcttcttctt 235
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 226 tcttcttcttcttcttctt 244
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 232 tcttcttcttcttcttctt 250
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 220 tcttcttcttcttcttctt 238
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 241 tcttcttcttcttcttctt 259
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 235 tcttcttcttcttcttctt 253
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 247 tcttcttcttcttcttctt 265
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 223 tcttcttcttcttcttctt 241
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 38.2 bits (19), Expect = 0.054
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 229 tcttcttcttcttcttctt 247
|||||||||||||||||||
Sbjct: 567 tcttcttcttcttcttctt 549
Score = 34.2 bits (17), Expect = 0.85
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 250 tcttcttcttcttcttc 266
|||||||||||||||||
Sbjct: 567 tcttcttcttcttcttc 551
>At4g02810.1 68417.m00381 expressed protein
Length = 1040
Score = 107 bits (54), Expect = 7e-23
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 213 ctcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 687
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 666
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 684
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 663
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 669
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 672
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 675
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 681
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 678
Score = 36.2 bits (18), Expect = 0.21
Identities = 45/54 (83%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttca 267
||||||||||||||||| ||| | || | || || ||||| ||||||||||||
Sbjct: 679 tcttcttcttcttcttcctctgcatcgtattgatcatcttcatcttcttcttca 626
>At5g03710.1 68418.m00331 hypothetical protein
Length = 246
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 49
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 46
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 64
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 55
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 25
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 73
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 22
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 145
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 139
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 19
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 76
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 148
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 124
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 31
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 37
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 34
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 40
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 43
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 121
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 52
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 61
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 142
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 118
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 127
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 58
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 28
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 130
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 16
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 85
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 115
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 67
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 82
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 88
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 91
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 97
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 94
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 100
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 103
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 109
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 106
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 112
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 79
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 136
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 133
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 70
Score = 101 bits (51), Expect = 4e-21
Identities = 51/51 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct 264
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct 15
>At4g11385.1 68417.m01836 hypothetical protein
Length = 432
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 327
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 321
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 318
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 324
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 315
Score = 101 bits (51), Expect = 4e-21
Identities = 51/51 (100%)
Strand = Plus / Minus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct 264
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct 314
Score = 101 bits (51), Expect = 4e-21
Identities = 51/51 (100%)
Strand = Plus / Minus
Query: 216 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 330
>At3g06660.1 68416.m00784 PAPA-1-like family protein / zinc finger (HIT type)
family protein contains Pfam domains, PF04795:
PAPA-1-like conserved region and PF04438: HIT zinc
finger
Length = 1686
Score = 105 bits (53), Expect = 3e-22
Identities = 53/53 (100%)
Strand = Plus / Plus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 58
Score = 103 bits (52), Expect = 1e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 215 cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 266
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc 55
Score = 101 bits (51), Expect = 4e-21
Identities = 51/51 (100%)
Strand = Plus / Plus
Query: 214 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct 264
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct 59
Database: ../PTA.blast_byTAIR/DB/ATH1_cdna_cm_20040228.fa
Posted date: Jun 25, 2004 12:58 PM
Number of letters in database: 44,058,232
Number of sequences in database: 29,161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 129,970
Number of Sequences: 29161
Number of extensions: 129970
Number of successful extensions: 57517
Number of sequences better than 10.0: 2034
length of query: 399
length of database: 44,058,232
effective HSP length: 17
effective length of query: 382
effective length of database: 43,562,495
effective search space: 16640873090
effective search space used: 16640873090
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 16 (32.2 bits)